Oncorhynchus masou masou (cherry salmon): 135520271
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Entry
135520271 CDS
T10723
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135520271
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135520271
PBAF complex
135520271
GBAF(ncBAF) complex
135520271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135520271
NCBI-ProteinID:
XP_064801766
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All DBs
Position
29:complement(64257081..64275039)
Genome browser
AA seq
1095 aa
AA seq
DB search
MATAATAAGGTGSGGPAAGPVGVGTTVGRKKDGGPSSKYWESAETVSQIDSVRQWIGKHY
KKYVQADSPSNKSLAGLVVQLLQFQEDAFGRRVNNPALTKLPTKSFLDFKAGGALCHILG
STYKFKSEQGWRRFDLQNPSRMDRNVEMFLNVEKTLVQNNCLTRPTVFLVPDMEQKQANK
LKDIIKRHQGSITEDKSKATHHIYPSLTQQEDEEWLRPVMRKDKQVLVHWGMYPDSYDTW
VSTSDVEGDVEDPPTSEKPWKVHAKWVLDTDAFNEWMNEEDYEVDENKKTVSFRQRIFPK
EEESSRTPDRKERKANAAGKKRRRSPSPPTTPAESRKKGGKKGNPGSHWKRRGHRGEDED
EEEDLTKDMEDPSPVPSMEEVTLPKNVNSKKDSENTPVKGGAVADLDDLEDDSVVSGGKE
EEEQGKAEVNRLIDSSEDNVTEQTHHIIIPSYAAWFDYNCIHEIERRALPEFFNGKNKSK
SPEIYLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAVMRVHAFLEQWGLVNYQVDAE
SRPLPMGPPPTPHFNVLADTPSGLTPVHHRPPQIPSGQQMINFPEKGKDKPSDMQNFGLR
NDLYSKKNPKSKGTSGGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLR
LPIEDPYLENSESSLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVAAAAAKAALEEFS
RVREEVPAELVEAHVKKVQEAARSTGKVDPAYGLESSGIAGTAPEEPEKTEPAETEKMDT
DSDSQQPDKAESKDEAEKPSESAEKLAEGEKVKSEMAEPSEREEGESEGGEGKATADKDK
EEAMETSEEDKEEQGTMEEEKEERKKLEPDGGEGNIATAAAAALASAATKAKHLAAVEER
KIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALELQRQQLLTERQAFHMEQLKYA
EMKARQQMEQQQASAVAQGPAPHHGPPGPGMHHGPPHHGPPPAMHSGHGPPGPGFHPMGP
HHSQQTGPMGGPGQPMPGRMMPGGPPTGSMPPMMGPRHPGAPNGMYPGPSPLQPDGMPPA
SVGPQAAAPARVADN
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagcggcaactgcagcgggtggaacgggttcagggggacctgcagccggccct
gtgggcgttggtactacggtgggccgtaagaaagatggaggtccttcgtcgaaatactgg
gaaagcgcagaaacggtctctcagatcgattcggtgcgccaatggatcgggaaacactac
aaaaagtatgtacaggcagactctccctccaataagtccctggcagggctggtggtgcag
ctgcttcagttccaggaagatgctttcgggcggagggtgaacaaccctgccctcaccaag
ttgcctaccaagagcttcctggacttcaaggcagggggtgctctgtgtcatatcctgggc
tccacctacaagttcaagagcgagcagggctggcgtaggtttgacctgcagaacccctcc
aggatggacaggaatgtggagatgttcttgaatgtagagaagaccctggttcagaataac
tgcctgactcgaccaactgtgttcctggtgcctgacatggagcagaagcaggccaataag
ctgaaggacatcatcaaaagacaccagggctctatcactgaggacaagtctaaggccacc
catcatatctacccctctctaacccagcaggaggatgaggagtggctgcgtccggtcatg
cgtaaggacaagcaggtgctggtgcactggggcatgtacccagacagttatgacacctgg
gtgtccaccagtgacgtggagggggatgtggaggacccacccacctctgagaagccctgg
aaggtgcatgccaagtgggtcctggacaccgatgccttcaacgagtggatgaatgaggaa
gactatgaggtggacgagaacaagaagactgtgagcttccgccagaggatcttcccaaag
gaggaggagtcttcccgtacacccgatcgcaaggagcgcaaggccaacgccgccgggaag
aagaggaggcgctcgccatctcccccgaccaccccagccgagtcccgcaagaagggtggc
aagaaggggaaccctgggtctcactggaagcgtcgtggccaccgtggagaggacgaggat
gaggaagaggacctgaccaaggacatggaggacccctcgcctgttcccagcatggaggag
gtcactttgcctaagaacgtgaactctaagaaagacagcgagaacaccccagtgaaggga
ggggcagtggcagatttggatgatctggaggatgactctgtggtctctggaggcaaggag
gaggaggagcagggcaaggccgaggtcaaccgcctcatcgactccagcgaggacaatgtg
accgagcagacccaccacatcatcatccccagctacgccgcctggttcgactacaactgt
atccacgagattgagaggcgtgcactgccagagttcttcaacggcaagaacaagtccaag
tccccagaaatatacctggcctaccgtaacttcatgatcgacacgtaccggctcaacccc
caggagtacctgacctccacctcctgccgcaggaacctgacgggagacgtgtgtgccgtc
atgagggtccatgcgttcctggagcagtgggggctggtgaactaccaggtggatgctgag
agccgccccctccccatgggccccccgcccaccccccacttcaacgtgctggctgacacc
ccctctggcctgacgccggtgcaccaccgccccccacagatcccctccggccagcagatg
atcaacttcccagagaagggcaaagacaagccctctgacatgcagaactttggcctgcgt
aacgacctctactccaagaagaaccccaagagtaaaggaaccagcggcggccgggagtgg
accgagcaggagactctgctcctattggaggctctggagatgtacaaggacgactggaac
aaggtgtcggagcatgtgggctcgcgcacccaggacgagtgtatcctgcacttcctgcgt
ctgcccatcgaggacccctacctggagaactctgagtcgtccctgggccccctggcctat
cagcccgtacccttcagccagtcaggcaaccctgtcatgagcaccgtggccttcctggcc
tccgtggtagacccccgtgtggccgccgccgccgccaaggcagccctggaggagtttagc
cgtgtgcgtgaggaggtgccagcagagctggtggaggcccatgtgaagaaggtgcaggag
gcggcccgcagcacgggcaaggtagaccccgcctatggcctggagagcagcggcatcgca
ggaaccgcccccgaggagcccgagaagaccgagccagcagaaacagagaagatggacaca
gactccgactcgcagcagcctgacaaggctgagtctaaggacgaggcagagaagcccagt
gagtctgctgagaagctggctgagggagaaaaggtgaagagcgagatggccgagccgtcg
gagcgggaggagggggagagcgagggaggagagggcaaggctacagcagacaaagacaag
gaggaggctatggagacctcggaggaggacaaggaggagcagggaacaatggaagaggag
aaagaagagaggaagaagctagagccggacggaggggagggtaacattgccactgctgct
gctgctgccctcgcctcagctgccaccaaggccaagcacctggcggcggtggaggagagg
aagatcaaatctctggtggctctgctggtggagactcagatgaagaagctggagatcaag
ctcagacactttgaggagctggaaaccatcatggaccgagagaaagaggctttagagttg
cagaggcagcagctgctgacagagcgccaggccttccacatggagcagctgaagtatgct
gagatgaaggcccgccagcagatggagcagcagcaggccagtgcagtggcccagggcccc
gcaccccaccatggccccccagggccaggcatgcatcacggacccccccaccacggaccc
cctcccgccatgcactctggacacggcccccccggccccgggttccaccccatgggtccc
caccactcgcaacagacaggaccaatgggagggcccggtcagcccatgccagggcgcatg
atgcctggtggcccccccactggcagcatgcctcccatgatgggtccccgccaccctgga
gcccccaacggcatgtaccctggcccctcgcctctacagcctgatggtatgcccccagcg
tctgtgggacctcaagcggcagccccagcacgagttgctgacaactaa
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