Oncorhynchus masou masou (cherry salmon): 135520322
Help
Entry
135520322 CDS
T10723
Name
(RefSeq) DENN domain-containing protein 4B-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135520322
Membrane trafficking [BR:
omm04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
135520322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
DUF4616
ARM_UBP24_USP9X-Y
SPA
Motif
Other DBs
NCBI-GeneID:
135520322
NCBI-ProteinID:
XP_064801845
LinkDB
All DBs
Position
29:65959240..65997313
Genome browser
AA seq
1497 aa
AA seq
DB search
MTEEKCPQLVDYFVVAGLAPGGSAPLDEEGQQRGGRVVEPVIDLAVIARGLGEEVPEGFT
CIEKTQGGHPAGLSAGLINNPHMYLCYRRGHDKPPILDLGVLYEGKEVVKQGWNVIETTP
YSRSASLSSGGPATHRTFLTYRRAPESQALHTLGVTDISLLLPSKGEVAPHTFCRVEKNL
NTGIWGPALYLCYKRAVAKANALVYEAGLISRYPEADVESFPLPESVPMFCLPMGVTVES
WPLNTKYQLPVFSTFVLTSACGDKVYGAAIQFYEAFPRECLSERQSVRLGLVSVVDRRPI
TNRTLQVKKSVCVLSHWPFFTVFQKFLTFVYRYSISGPHVLPLEKHISSFMHNVPFPSPQ
RPRILVQLSPYDNLLLCQPVSSPLLLSGASFVKLLQNLGPENACVLLLAVLTEHKLLLHS
LRPDVLTSVSEALVSMTFPLRWHCPYIPLCPLRLADVLCAPMPFIVGVHSSYFDLYDPPT
DVVCVDLDTNTIFQAEDKKPLSWRSLPRKQGKMLVNTLTNLMKTLEKIYTTGQEEATLEF
LLTDYDLIYGRQKQLELEIQEAFLRFMSCLLRGYRAYLLPITQAPSDRTTDCSSLFNLQG
FLKSRERTHQKFYTQLTRTQMFTQFIEECSFVSDRHACLEFFDECVQKQSDVEKPEEVRL
IDLDEAHSGEHTVFIMPPEEPQEPDGSECPTHYSYETFPVLCMDLFDRPQDQLRVPTKGS
APSSPAPRRTKQEIKLAQKRAQIYSAVPDMWSKCLLGHCYGLWFIYLPTFVRAESAKVRA
LQTAYEVLKHMETRKVVLPDEVCYRILMQLCGQYGQPVLAVRVLLEMKKAGITPNTITYA
YYNKAVLESKWPSTNQGGRLRWAKLRNVLMAVAQFRQPIKQRLKSGSVRSRTDTMDSNQR
SRPQSNLIRQSSWSGLSESSSHESLTGSMVKSNSLNSMRGSTDKSKLSMKAVLRNPGANG
CSDPASRKPPVGPRDTSTPSPFPPGDVLVRRDQVCLSTFYKDCAETAVSDPDCSCQPEDR
DGRPPGPRDTVSRKAVDENYNNVSPPSRGSLAGKLQQLLTPTRHRVSGRRAASVDARRSG
GENGPVRRVSEQRLSRKAQVAESLLKAKERLYTATSESSLSVGSDVDLPETTNLAFPLRK
SWDTNQEGAGLEVLMSSCSLCRSCNSLVYDEEIMAGWTSDDSNLNSSCPFCSTTFVPLLN
AEICDLGPISSLERTNWNMDEEVESAAKSPGDQEAILGHNGVSEDSSSETSSYSESSSAT
MGSSVGGSPQVTVAYLSPLVLRKELESLLENEGEAVLSQGQLLDSHSIIFWNMVWYFHRL
GLPSNLLQLVRSSPLANQLAQTSENSAVRVRLLWDTLTPDTDHWPPLYILWRIHSGVPMR
NHSWRRHNHPFTLAFLEEVLRWVGMNEVHKGITLFLETIAKQPGTPKIQRSLYREMLFLT
LAAMGRDHVAAFDKKYKAAYQRLSGSLGREELRRKRAQPPSPKAVDCRRSFLLPLEC
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggagaaatgcccccagctagtggactactttgtggtggcagggctggctccg
gggggctcggccccactggacgaagagggccagcagagagggggccgggtggtggagccg
gtcatagacctggcggtgatcgcccggggcttgggggaggaggtgcccgagggcttcacc
tgcatcgagaagacccaggggggccacccggccgggctgagcgccggactcatcaacaac
ccacacatgtacctgtgttaccgccgtgggcacgacaagccacccatcctcgacctcggg
gtgctgtacgagggcaaagaggtggtgaagcagggctggaatgtgatcgagaccaccccc
tacagccgctcagccagcctgagctccggggggcccgccacccaccgcaccttcctgact
taccgccgggccccagagtcccaggccctccacaccctgggggtcacagacatctccctc
ctgctgcccagcaagggggaggtggccccccacaccttctgccgggtggagaagaacctc
aacactggcatatggggtccagccttatacctgtgctacaagagagctgtagccaaagcc
aacgccctagtctatgaagcaggtctgatcagtcggtatccggaagcagacgtggagtcg
ttccccctgccagagtctgtgcctatgttctgtctgcccatgggtgtgacggtggagagc
tggcccctcaacaccaagtaccagctccctgtcttctctaccttcgtcctcaccagtgcc
tgtggcgacaaggtttacggtgctgccatccagttctacgaggcgttcccacgggagtgc
ctctcagagcggcagagcgtccgtctgggcctggtgagcgtggtggaccggcggcctatc
accaaccgcaccctgcaggtgaagaagagcgtgtgtgttctctcccactggcccttcttc
accgtcttccagaagttcctcaccttcgtctaccgatactccatctccggaccccacgtg
ctgccacttgagaagcacatctccagcttcatgcacaacgtcccgttcccctcccctcag
cgacctcgcatcctagtgcagctctccccctatgacaaccttctcctctgtcagcctgtc
tcctcccccttactgctcagtggtgccagctttgtgaagctgctgcagaacctgggccct
gagaatgcctgtgtcctgctgctggctgtgctgacggagcacaaactactgctacactcc
ctccgccccgacgttctcacctccgtcagcgaggccctggtatctatgacgtttcctctg
cgttggcactgcccttacatccccctgtgcccgctgcggctggcagacgtactgtgtgcc
cccatgcccttcattgtgggcgtccactccagctactttgacctctatgacccccctact
gacgtggtgtgtgttgacctggacaccaacaccatctttcaagcagaggacaagaagccg
ttgtcatggcgatcactaccaaggaagcaaggcaagatgctggtgaataccctcaccaac
ttgatgaagacactggagaaaatctacaccactggccaagaggaggccaccctggagttc
ctgctgacggactatgacctgatctacgggcgtcagaagcagctggagctggagatccag
gaggcattcctacgtttcatgagctgcctgctcaggggctaccgtgcctacctgctgccc
atcacccaggccccttcagacaggactaccgactgcagctccctcttcaacctgcagggc
ttcctgaagtctcgtgaacgcacccaccagaagttctacacccagctgaccaggacccag
atgttcactcagttcatcgaggagtgctccttcgtcagtgatcgccacgcctgtctggaa
ttcttcgacgagtgtgtccagaagcagtcggatgtggagaagcctgaggaggtgcgtctg
atagacctggacgaggcccacagtggggagcacacggtcttcatcatgcccccagaggaa
ccccaggaaccagacggttcagagtgccccactcactacagctatgagacattccctgtg
ctctgcatggatctttttgaccggcctcaggaccagctacgtgtccctaccaaggggagt
gccccgagcagccctgccccgcgacggactaaacaggagattaagctggcacagaagcgg
gcacagatatactcggcagtgcccgacatgtggtccaaatgcctgctgggccactgctat
gggctgtggttcatatacctgcccacctttgtgcgggcggagagtgccaaggtgcgtgcc
ttgcaaacggcatacgaggtgctcaagcacatggagaccaggaaggtggtactaccggat
gaggtgtgttacaggatcctgatgcagctgtgtgggcagtacgggcagcctgtgctcgct
gttagggtacttctggagatgaagaaagctgggatcacacccaacaccatcacctatgca
tactacaacaaggcagtgctggagagcaagtggccctccaccaatcagggtggccgtctg
cgctgggccaagttgcgcaacgttctgatggccgtggcgcagttcagacagccaatcaaa
caacggctgaagagtggttcagtacgctcgcggacagatacaatggacagtaaccaacgg
tcccgcccacaatctaacctgattcgtcagtccagctggagcggcctgagtgaaagctcc
agccacgaatcgctgacggggtctatggtgaagagcaacagcctgaacagcatgagaggc
tcaacagacaagtctaagctctcaatgaaggcggtgctccggaacccaggtgccaatggc
tgcagcgatcctgcctcccgtaaaccccccgtggggccacgagacacctccaccccttct
ccctttccccctggtgatgtactggtacgccgcgaccaggtgtgcctgtccaccttctac
aaagactgtgccgagacggccgtctctgaccccgactgcagctgccagcctgaagacaga
gacggcaggccacctgggccgagagacaccgtgagccgcaaggccgtggacgagaactac
aataatgtgtcaccgccgagtcggggaagcctggcagggaaactacagcagctgctcaca
cctactcgccatcgagtctcggggcggcgggccgcaagtgtagacgctcggcgctcgggg
ggtgaaaacgggccggtgcgcagggtgtcggaacagaggctgtcccgaaaagcccaggtg
gctgagagcctgctaaaggctaaggagaggctctacactgctacctctgagagttctctg
tcagtagggagtgacgtcgacctccctgaaaccaccaatttggcctttcctctccgcaag
tcctgggacaccaaccaagagggagcaggactagaggtgttgatgtcgagctgctccctg
tgtcggagctgtaactccctggtctatgatgaggagataatggccgggtggacgtctgac
gactccaacctcaactccagctgtcccttctgctcgaccaccttcgtcccccttctcaac
gctgagatctgtgacctaggacccatcagcagcctggaacgtaccaattggaacatggac
gaggaggtggaaagcgcagccaagtcccctggtgaccaggaggccatcctgggtcacaac
ggtgtgagtgaggactccagctctgagaccagcagttattctgagagcagcagcgctacc
atgggatcatcggtgggcgggtcgccccaggtgacggtggcctacctgagcccattggtg
ctgcgcaaggagcttgagagcctgctggagaacgagggtgaggcggtgctgtcgcagggc
cagctcctggacagccactccatcatcttctggaacatggtttggtacttccatcgcctg
ggcctgcccagcaatctgctacagctggttcgctcctcaccgctggccaaccaactagca
cagacttcagagaactcagcagtgagggtgaggctgctgtgggacacactgacccctgac
acagaccactggccccccctctacatcctgtggaggatacacagtggcgtacccatgcgg
aaccacagctggcggaggcacaaccaccccttcaccctggccttcctggaggaagtgctg
cgctgggtcgggatgaacgaggtacacaagggaatcactctcttcctggaaaccattgcc
aagcaaccaggcacgcccaagatacaaaggagtctgtacagagagatgctcttcctcacg
ctggctgccatgggtagagatcacgttgctgcgtttgataagaaatacaaggctgcgtac
caacggctgagtggctccttgggccgcgaggagctccgcaggaagcgagcccagccacct
agccccaaggctgtggactgcagacggagcttccttctgcccctcgagtgctaa
DBGET
integrated database retrieval system
