Oncorhynchus masou masou (cherry salmon): 135520342
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Entry
135520342 CDS
T10723
Name
(RefSeq) integrin alpha-8-like isoform X1
KO
K06584
integrin alpha 8
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04510
Focal adhesion
omm04512
ECM-receptor interaction
omm04514
Cell adhesion molecule (CAM) interaction
omm04518
Integrin signaling
omm04810
Regulation of actin cytoskeleton
omm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135520342
04514 Cell adhesion molecule (CAM) interaction
135520342
04518 Integrin signaling
135520342
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135520342
09142 Cell motility
04820 Cytoskeleton in muscle cells
135520342
04810 Regulation of actin cytoskeleton
135520342
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135520342
Cell adhesion molecules [BR:
omm04515
]
Integrins
Integrin alpha subunits
135520342
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
135520342
NCBI-ProteinID:
XP_064801885
LinkDB
All DBs
Position
29:complement(66469382..66552958)
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AA seq
1081 aa
AA seq
DB search
MCAYRMCTFGGMLCRVVSVLWLVLSVVSGFNLHAERPAVYGGPEGSYFGYSVDFYRPTPE
SSTLSVLVGAPKANTSQPGIIEGGAVYYCPYPPNPDSTKQPYSCTQIPFDNANNRMIKVN
GTREPLEFKSHQWFGASVRTHKGKVVACAPLYHWRTVKVNGEKDPVGTCYVAVQNFSAYA
EYSPCRTNDPDPEGQGFCQAGFSVDFTKEGTLVVGGPGSFYWQGQVMTAGVAEILNGYSL
KAVLRRVHGEKQTHAAADTHDDSYLGYSVAVGEFTGDSEQELIAGVPRGAQNFGYVAVIN
STNLTFIMNFTGEQMASYFGYSVAVTDLNGDGKLRYVPQYLCPAPDSAITLHPIDDRYDD
VLVGAPLYMERERESKPKEVGRVYLYLQHSPLTFSEPLLLTGTHTFGRFGTAIAPLGDLN
QDGYNDVAVGCPFGGEDRSGLVLIYNGQRDLTARGLTLSQELYGAWDSSSGLSGYGFTLR
GDRDLDNNHYPDLIVGAFGKGEVSVYRARPVVSVEAEMILTPRILNPDDRSCLLTESDTM
VTCLRVDICAKVSGVGIPDSVVLNAELQLDWLKGVRGGVKRVHFLDSHQPQHTGVLTLGH
SHPHSCLNYTVYLREEDEFRDKLTPISLALNYSLAPPSNRDLPPVLNRYSSTFLQEQAYI
LLDCGEDNECIPDLQLSASMDSTELVVGDDNLVMLTINAVNKGEGAYETELHTLLPLEAD
YIGVERRIESLSRLNCEYRMVNDSRLVVCDLGNPMVAGTEVSVGLRFAVQRLDDAGPHID
FDLQIHSSNKDNSKSNPVSLSLSISARAQLDLRGVCHPSQVVLPFPHWEPKEKPVKEDDV
GPQVTHIYELHNSGPSSIREAELQVGWPSRFRDEHLLYALEVLTEGPISCRSNTSLNILG
LQMSSVQDTPELLGFLRNSSSPHRYRRATSAAQPYSSKTLNCSNIICLRILCVVGRLDRG
QSAVVKIRSRLWAHTFLQRRNDPYLLNSTVSFRVKALPYRLQPSSLPQHTTSMGTLVLWG
TPDVAFAVPLWVIILAILLGLLVLAMLTLAMWKCGFFDRARLPADDVSDREQLTSDQLAD
A
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcttataggatgtgcacgttcggtgggatgttgtgtcgcgtggtgtcggtgctg
tggctggtcctttcggtggtctcggggttcaacctgcatgcggagcgcccggcggtgtac
ggaggaccagaggggagctactttggttactccgtggacttctaccgaccgacccccgaa
agcagcacgttgagtgtgttggtgggagcgcccaaggccaacacatcccagccaggcatc
atagagggaggagctgtctactactgtccctatcccccaaaccccgactccaccaagcaa
ccctacagctgcacacagatacccttcgacaacgccaataacaggatgattaaggttaat
ggcaccagggagcctctggagttcaagtctcaccagtggtttggagcctcagttagaact
cacaaaggcaaagtggtggcctgtgctcctctctaccactggcgtactgtgaaggtgaac
ggtgagaaggacccggtaggaacctgctatgttgccgtgcagaacttcagcgcctacgca
gaatactcaccctgtaggaccaatgatccagacccggagggacagggtttctgccaggcc
gggttcagtgtggacttcaccaaggaggggacactggtggtgggcggacctggaagcttc
tactggcaaggtcaggtgatgactgcaggcgtagcagagatattaaatggctactctcta
aaagccgtgctcaggagagtccatggagagaaacagacacacgctgcagctgatacccat
gacgacagctacctaggttactctgtggcagtgggggaattcacaggagactcagagcaa
gagctgatagctggggttccaagaggggcacagaactttggatatgtagctgtgattaac
tccactaatctgacattcatcatgaacttcacaggagagcagatggcttcctactttggc
tattctgtggctgttactgacctcaatggagacggtaaactccgttatgttcctcaatac
ctgtgtcctgcgcctgactccgctataactctgcacccaatcgatgacaggtatgatgat
gtactggtaggagcccctctctacatggagagagagagggagagtaagcccaaggaggtg
ggccgtgtctacctgtacctccagcactccccgctcaccttctccgagccccttctcctg
acgggaacacacacctttggacgctttgggactgccatcgccccgctaggagacctcaac
caggacggatacaatgacgtggcagtgggttgtccgtttggaggggaggaccggagtggc
ctggtgttgatctacaatggccagagagacctgacggcccgcggcctaaccctcagccag
gagctctatggagcctgggactccagtagtggcctctccggctacggcttcaccctcagg
ggggacagagacctggacaacaaccattaccctgatctgatagtgggagcatttggtaaa
ggggaggtgtcggtgtacagggctcgtcctgtagtgtcagtggaggctgagatgatcctg
actcctagaatcctgaaccctgacgaccgatcctgcctcctgacagaatctgataccatg
gtaacctgtctcagggtagatatttgtgcgaaggtgagcggtgtggggatcccagactct
gtagtcttgaatgcagagctgcaactggattggctgaaaggtgtgaggggcggagtaaaa
agagttcatttcctggattcccatcagccccagcacacaggggtcctaactcttggccac
agccatccacactcctgcctgaactatacggtctacctacgagaggaggatgaatttagg
gataaattgactcccatctcattggctctgaactacagtttagcccctccttccaaccgg
gacctccctcctgttctcaaccgctacagcagtaccttcctgcaggaacaggcgtatatt
ctgctggactgtggggaagacaacgagtgtattccagacctccagctgtctgcaagcatg
gacagtacagagctggtggtcggggatgacaacctggtcatgttgaccataaacgcggtt
aacaaaggagagggggcatatgagacagagctacacacactcctaccccttgaggctgac
tacataggagtggaacgcaggatagagtctctatccaggttgaactgtgagtacaggatg
gtgaatgactccagactggtggtgtgtgacctggggaaccctatggttgctggaacagaa
gtatctgtaggtttaaggtttgctgtccaaaggctggatgatgccggtcctcacattgac
tttgacctacagatccacagttcaaacaaagacaactccaagagcaacccagtcagtctg
tctctctccatctctgccagagctcagctagacctgaggggggtgtgtcatccctctcag
gtggttcttccgtttcctcactgggagcccaaagagaagccggtcaaagaggatgacgta
ggaccccaagtcacacacatctacgagctccataactcaggtcccagcagtattcgggag
gcggagctccaggtgggctggccctctcgtttccgtgacgaacacctgctctacgctctg
gaggttctaacggaaggaccaatcagctgccggagcaacaccagcctcaacatcctgggc
ctacagatgtcctctgtccaggacactccagaattgttgggctttctgagaaacagtagc
tctcctcaccgctacagacgagccaccagcgctgcccagccctacagcagcaagaccctg
aactgcagtaacatcatttgtctaagaattttgtgtgtggtcgggcggttggaccgtggt
cagagcgctgtagtcaagatccgttcccgactctgggctcacaccttcctccagagacgt
aacgacccatacctcctcaactccaccgtgtccttcagagtgaaggccctgccctaccgc
ctccagccctcctccttaccccaacacaccacttcaatgggtacactggtgctgtggggg
actcctgatgtggcgtttgctgttcctctgtgggtcatcattctggccatcctactggga
ctgctggtcctggccatgctaacactggccatgtggaagtgtgggttctttgaccgggca
cggctgccagcggatgacgtgtcagaccgtgagcagctgacctctgaccaattagcagac
gcctaa
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