Oncorhynchus masou masou (cherry salmon): 135520396
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Entry
135520396 CDS
T10723
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5-like isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135520396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135520396
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
135520396
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
HECT type E3
135520396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
Motif
Other DBs
NCBI-GeneID:
135520396
NCBI-ProteinID:
XP_064801998
LinkDB
All DBs
Position
29:68961724..69006244
Genome browser
AA seq
2872 aa
AA seq
DB search
MTSIHFVVHPLPGTEDQLNDRLREVSEKLNKYNFNSHPHLNLLEQASLKQCVVGPNHAGF
LLEDGRVCRISFAVQPDRLELTKPDGNDGSKLSGSGSGTGRSSRPGRTSDPPWFLSGSDT
LGRLAGNTLGSRWSSGVNGGSGGGGGGGGGSSSSVGGAGGGGVGGAVSGGGGGGGSSGRS
STAARDSRRQTRVIRTGRDRGSGLLGSQPQPVIPASVIPEELISQAQVVLQGKSRSVIIR
ELQRTNLDVNLAVNNLLSRDDEDGDDGDDTASESYLPGEDLMSLLDADIHSAHPSVIIDA
DAMFSEDISYFGYPSFRRSSLSRLGSSRVLLLPLERDSELLRERESVLRLRERRWLDGAS
FDTERGSTSREGEPSLDKKNIPVQSPVSLGEELQWWPDKDGVKFVSIGSLFSELVAVSSK
GELYQWKWSEPEPYRNTQNPSIRHPRVSFLGLTNEKITLLSANSIRATVATETNKVATWM
DDTLSSVASKLEHSAQAYPELQGERIVSLHCCALYTCAQLENSLYWWGVVPFSQRKKMLE
KARAKNKKPKSSAGISSIPNITVGTQVCLRNNPLYHAGAVAFSVNAGIPKVGLLLESVWN
MNDSCRFQLRSPESLKNMDKTTKTQEIKTESKPELVKTEMGPPPSPASTCSDTSSIASSA
SLPYKRRRSTPAPKEEEKVNEEQWPLREVVFVEDVKNVPVGKVLKVDGAYVAVKFPGTSS
SVSTQPSQTSAPAPITDSDPSSLLQDCRLLRIDELQVVKTGGTPKVPDCFQRTPKKLCIP
EKAEILAVNVDSKGVHAVLKTGNWVRYCIFDLATGKAEQENNFPTSNLAFLGQSERNVAI
FTAGQDSPVILRDGNGTIYPMAKDCMGGIRDPEWLDLPPIASLGMGVHSLANLPTNSTIK
KKAAIIILAVEKQTLMQHVLRCDFEACRQYLVNLEQAVLLEQSPHVLHSFLGHRCDGNRN
ILHACVSVCFPVSNKETKEEEEAERSERNTFAERLSAVEAIANAISVVSSNSSGNRTGSS
SSRGLRLREMMRRSLRAAGLGRHESGPSSSDHQDPVSPPIAPPSWVPDPPPMDPDGDIDF
ILAPAVGSLTTASTGTSQGPSTSTIPGPSESSVVESKDRKANAHLILKLMCDSMVLRPHL
RELLSAKDARGMTPFMLAVSGRAYPAAITVLEAAQKMAKVGDPGMTEKVDADSVFMEMIC
PSGTNPDDSPLYVLCCNDTCSFTWTGAEHINQDIFECRTCGLLESLCCCTECARVCHKGH
DCKLKRTSPTAYCDCWEKCKCKTLIAGQKAARLDLLYRLLTTTNLVTSPNSRGEHILLFL
VQTVARQSVEHCQYRPPRIREDRNRKAANAEDSDMPDHDLEPPRFAQLALERVLQDWNAL
KSMIMFGSQENKDPLSASSRIAHLLPEEQVYLNQQSGTIRLDCFTHCLIVKCAPDITFID
TLLGTLVKELQNKYTPGRREEAIVVTRRFLRSVARVFVILSVEMASSKKKNNFIPQPIGK
CRRVFQALLPYAVEELCNVAESLIVPVRMGIARPTAPFTLASTSIDAVQGSEELFSVEPL
PPRPSPDQSSNSSQTASSYIIRNPQPRRSSQSQPVRGRDEEQDDIVSADVEEVEVVEGVA
GEEDHHEDPEEHGEQGEENTEAEGQHDEHDEDGSDMELDLLAAAETESDSESNHSNQDNA
SGRRSVVTAATAGSEAGASSVPAFFSEDDSQSNDSSDSDSSSSQSDDVDQETFLLDEPLE
RTTTASHVNSAAQAPRSMQWAVRNTPSQRATGSAPSSSSTPAAASSTGLIYIDPSNLRRS
SAISTSAAAAAAALEASNSSSYLTSASSLARAYSIVIRQISDLMSLIPKYNHLVYSQYPA
AVKLTYQDAVNLQNFVEDKLIPTWNWMVSIMDSTEAQLRYGSALSSAGDPGHPSHPLHAS
QHSARRERMTAREEASLRTLEGRRSGRAATLLTVRQGMMSARGDFLNYALSLMRSHNDEH
SDVLPVLDVCSLKHVAYVFQALIYWIKAMNQQTTLDTTQMDRKRSREILELGLDNEDSEH
ENDEDTNQSSTLQDKEDDPVPAETGQNHPFFRRSDSMTFLGCIPPNPFEVPLAEAIPLAD
QPHLLQPNARKEDLFGRPSQGLYSSSYTASKGLAESTLDRSCMEVNMGSSQILPTKMSYS
ANLKNVMSMETSQRGREDQPMDQELMAPKPGPSPHDLAAQLKSSLLAEIGLTESDGPPLP
SFRPHCSFMGMVISHDMLLGRWRLSLELFGRVFMEDVGAEPGSILTELGGFEVKESKFRR
EMEKLRNLQSRDLALEVDRDRDQLIQQTMRQLNTHFGRRCTTTPMAVHRVKVTFKDEPGE
GSGVARSFYTAIALAFLSNDKLPNLDCVQSVSKGMQASSTCHHDYNSSMTLNLMQRLRNR
DRERERRSGGLRAGSRRDRDRDSRRQLSIDTRPFRPASEGNPSDEPDPLPAHRQALGERL
YPRVHAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVEEAMELLIAHGRENGADSI
LDLGLLEAPEKAQQQENRKRHGSTRSVVDMELDDPEDGDDNAPLFYQPGKRGFYSPRPGK
NTEARLNCFRNIGRILGLCLLQNELCPITLNRHVIKVLLGRKVNWHDFAFFDPVMYESLR
QLIRHSQAGEAEAVFAAMDLAFAIDLCKEEGAGQVELLSGGVNMPVTPLNVYEYVRKYAE
HRMLVVAEQPLHAMRKGLLDVLPKNALEDLTAEDFRLLVNGCGEVNVQMLISFTSFNDES
GTKTLARIHKESQRENADKLLQFKRWFWSIVEKMSMTERQDLVYFWTSSPSLPASEEGFQ
PMPSITIRPPDDQHLPTANTCISRLYVPLYSSKQILKQKLLLAIKTKNFGFV
NT seq
8619 nt
NT seq
+upstream
nt +downstream
nt
atgacatccatacactttgtggttcacccgttgcccgggacggaggaccagctcaatgac
agacttcgtgaagtgtcggagaaactcaacaaatacaactttaacagtcatccacacctc
aacctgctggagcaggcctccttaaaacaatgtgtagttggcccaaaccatgctggcttt
ctgcttgaggatggacgtgtgtgtcggatcagctttgctgtccagcctgatcgtttggag
ctgaccaaaccagatggcaacgatggttcaaagttgagtggcagtggttcagggacagga
aggagctccaggccaggcaggactagtgatcctccctggttcctgtctggctctgacaca
ctgggcagactggcaggcaacacccttgggagtcgctggagctccggggtgaacggtgga
tcaggaggaggaggtggtggcggcggtggcagcagcagcagtgtaggaggtgcaggggga
ggtggtgtaggaggagctgtcagtggaggtggtggtggtggaggctcctctgggaggtca
tctacagctgccagggactcgagacgtcagaccagggtgatccgcacagggagggaccgg
ggctctggtctcctgggcagccagccccagcctgtcatccctgcctcggtcatcccagag
gaactcatctcccaggctcaggtggtcctccaggggaagtctaggagtgtgatcatccgg
gagctccagaggaccaacctggatgtcaacctggctgtcaacaacctactgagcagagac
gatgaggacggtgacgatggcgatgacacagccagcgagtcctacctccctggagaggac
ctgatgtccttgctggatgctgacatccactcagcccaccccagtgtcatcatcgatgct
gacgccatgttctctgaggacatcagctactttggctacccctccttcagacgctcctcc
ctgtcccgcctgggttcctcgcgagttctccttcttcccttagagcgtgactcagagctg
ttgcgtgagcgtgagtctgtgttgaggttgcgggagcgaaggtggctggatggggcctcg
tttgacacggagaggggctccaccagccgcgagggggagcccagcctggacaagaagaac
atccccgtccagagccctgtctctctgggcgaggagctgcagtggtggcctgacaaggat
ggtgtgaagtttgtgagcatcgggtccttgttctctgagctggtggcagtgagctctaag
ggtgaactctaccagtggaagtggagtgaaccagaaccatacagaaacacacagaaccct
tctatccgccacccccgagtgtccttcttgggcctgaccaatgagaagatcaccctgctg
tctgctaacagcatcagagccaccgtggccacggagaccaacaaggtggcgacctggatg
gatgacaccctgagcagcgtggcatccaagctggaacacagtgcccaggcctaccctgag
ctgcagggggagcgcattgtgtctctgcactgctgtgccctctacacctgcgcccagctg
gagaacagcctgtactggtggggtgttgtaccttttagtcaacggaaaaagatgcttgaa
aaggctagagccaagaacaagaagccaaagtccagtgccggcatctcctcaatacccaac
atcaccgtgggaacgcaggtgtgcctgaggaataaccccctctatcacgccggtgctgtt
gccttttctgtcaacgctgggatccccaaggtgggactgctcctcgagtctgtctggaac
atgaacgacagctgcaggttccagctgcgatcaccagagagcctcaagaacatggacaag
accaccaagacacaggagatcaaaacggagagcaagccggagttggtaaagactgagatg
gggccccctccttccccggcctccacctgcagtgacacctcctccatcgctagcagtgcc
tcgctgccctacaaacgaagacgctcgaccccggctcccaaagaggaggagaaggtgaac
gaggagcagtggcctcttcgggaagtggtgtttgtggaggatgttaaaaatgtccctgtg
ggaaaggtgctgaaagtggatggtgcgtatgtagctgtgaagtttccagggacgtcaagc
agcgtgagcacacagccgagtcagactagtgctccagctcccatcactgactctgacccc
tcctcactgctgcaggactgtaggctgctcagaatagatgagttacaggtggtaaaaact
ggtggaactcctaaagttccagattgcttccagcgtacacctaaaaaactctgcatccca
gagaaggctgagattctggctgtgaatgttgactccaaaggagtccacgcagtgctgaag
actggtaactgggtgaggtactgtatctttgacctggccacaggcaaagcagagcaggag
aataacttccccaccagtaacctggccttcctggggcagagtgaacgcaatgtagcgatc
ttcaccgcaggacaggactccccagtcatccttcgggatggaaatggcacaatttaccca
atggccaaagactgtatgggcgggatccgagaccctgagtggctggacctgccgcccatc
gccagcctgggcatgggggtgcactccctggccaacctccccaccaactcaaccatcaag
aagaaagctgctattatcatattggctgtggagaagcagacgttgatgcagcacgtgctg
cgttgtgactttgaggcctgtcgtcagtacctggtcaacctggagcaggctgttctcctg
gagcagagtccccacgttctccactccttcctgggccaccgctgcgacggcaaccgcaac
atcctccacgcctgtgtctcagtctgcttccccgtcagcaacaaggagaccaaggaggag
gaagaagctgaacggtctgagaggaatacgtttgcagagagactgtcagcagtggaggcc
attgccaatgcaatctctgtggtgtctagcaacagctctgggaacaggacgggctcttct
agcagtagagggctgcgtctgagggagatgatgaggcgctctctgagagcagcggggctt
ggtcgtcacgagtccggcccctcctccagcgaccaccaggaccccgtgtccccacccatc
gcccctcccagctgggtgcctgacccccctcccatggacccagacggtgacatagacttc
atcctggcccctgcagtgggatctctcaccacagcctcaacagggaccagccagggcccc
agcacatccactataccaggcccctctgagtcttcggtggtggagtctaaagaccgcaag
gccaacgcccacctcatcctcaaactgatgtgtgacagcatggttctcaggccacacctc
cgcgagctgctctctgccaaggatgcccgtggaatgaccccgttcatgctggcagtaagc
gggagagcttacccagctgccattactgttctggaggctgcgcagaaaatggccaaggtg
ggagaccccggcatgactgagaaggtggatgcagactctgtgttcatggagatgatttgt
ccctcggggaccaaccctgacgactctcctctctacgtcctctgctgcaacgacacgtgc
agcttcacctggacaggcgctgaacacatcaaccaggatatctttgagtgtcggacctgc
ggcctgttggagtctctctgctgctgcactgagtgcgccagggtgtgtcacaaaggacac
gactgcaaactcaagaggacctctcccactgcgtactgtgactgctgggagaagtgtaag
tgtaagacgctgatcgctggacagaaagctgctcgcctggacctgctgtacagactgctc
accaccactaacctggtcaccagtccaaacagccggggggagcatatccttctgttcctg
gtgcagactgttgctaggcagagtgtggagcactgccagtaccggccccctcgcatcaga
gaggacaggaaccgcaaggctgccaatgctgaagactctgacatgccggaccatgacctg
gaacctccacgcttcgcccagctggccctggagagggtgctgcaggactggaatgctctc
aagtccatgataatgtttggatcccaggagaataaagacccgctgagtgccagcagccgt
atcgcccatcttcttccagaggagcaggtatacctgaaccagcagagtggcaccatccgc
ctggactgcttcacacactgcctcatcgtcaagtgtgcccctgacattacatttattgac
accctactggggaccttggtgaaggagctgcagaacaagtacacccctggccggagagag
gaggccatcgtcgtcaccaggaggttcctgcgctctgtggccagggtgtttgttatcctc
agcgtcgagatggcttcatccaaaaagaaaaataacttcatcccccagcccattgggaag
tgcaggcgtgtgttccaggccctgctgccctatgcggtggaggagctgtgcaacgtggcg
gagtccctcatcgtgcctgtgaggatgggcatcgcccggcccaccgcccccttcaccctg
gccagcaccagcatcgacgccgtgcagggcagcgaggaactcttctctgtggaacccttg
ccaccgagaccctccccagaccagtccagcaattctagtcagactgcatcgtcctacatc
atcaggaacccccagcctcgccgcagcagccagtcccagccggtcagagggagagatgag
gagcaggatgacattgtgtctgcagatgttgaagaggtggaggttgtcgagggcgttgcc
ggggaggaggatcaccatgaagacccggaggaacatggagaacagggagaggagaacact
gaggcagagggacagcatgatgaacatgatgaggatggaagtgacatggagttggatctg
ctggctgccgcagagactgagagcgacagtgagagtaaccatagcaaccaggacaatgcc
agcgggcggaggagtgttgtcaccgcagcaactgctggctccgaagcaggtgccagcagt
gtccctgccttcttttcagaggacgactcccagtccaacgactcaagcgactcggacagc
agcagcagccagagcgatgacgtggaccaggagacctttctattggatgagcccttggag
aggaccaccactgcctcgcacgtcaacagtgctgcccaggcgccacgctccatgcagtgg
gctgtacgcaacacccccagccagagagccacgggcagcgccccctccagctcctccacc
cccgctgcagcgagctccaccggtctgatctacatcgacccgtccaacctgcggcgcagc
agtgccatcagcaccagtgcggccgctgcggctgcagctctggaggcctccaactcgtcc
agctacctgacgtcagcctccagcttagcccgggcctacagcatcgtcatcagacagatc
tctgacctgatgagcctcatccctaagtacaaccatctggtctactcccagtaccctgct
gcagtcaaactcacctaccaggacgctgtcaacctgcagaactttgttgaggacaagctg
atccctacgtggaactggatggtgtccatcatggactctacagaggctcagctacgttac
ggctcggccctgtcctcagcaggtgaccccggacacccatcccaccccctccacgcctcg
cagcactccgcccgcagggagcgcatgaccgcccgcgaggaagccagcctccgcaccttg
gagggacggaggtctgggcgtgcggcaactctgctgacagtgcgtcaggggatgatgtca
gcgcggggtgacttcctgaactacgccctgtctctgatgcgttcccataatgacgagcac
tctgacgttctgcctgtgctggatgtgtgttctctcaaacacgtggcctacgtcttccag
gccctcatctactggatcaaagccatgaaccagcagacaactctggacacaacacagatg
gaccgcaagaggagccgagagattctggaactgggactggacaatgaagattctgaacat
gagaatgatgaggacaccaatcaaagctccactctccaggataaggaggatgacccggtc
cctgctgagacggggcagaaccacccgttcttccggcgctctgactccatgaccttcctg
ggctgtatcccccccaaccccttcgaggtccccctggctgaggccatccccctggcagac
cagcctcacctcctgcagcccaatgcaaggaaggaggatctgtttggccgtcctagtcag
ggcctgtactcgtcctcgtacacagcaagcaaaggcctggccgagtccaccctggaccgc
agctgcatggaggttaacatgggctcctctcagatcctacccaccaagatgtcctactca
gccaacctgaagaacgtgatgagtatggagactagtcagcgcggcagagaggaccagccc
atggaccaggagctaatggctccaaagccaggcccctcaccccatgatctagctgcccag
ctgaagagcagcctcctggctgaaataggcctcactgagagtgatggccccccgctccct
tcctttagaccccactgtagtttcatggggatggtgatctcccatgacatgctgctgggc
cgctggcgtctgtctctggagctgttcgggcgcgtcttcatggaggatgttggagcagag
cctggatcgatcctgaccgagctggggggatttgaggtgaaggagtctaagttccgccgg
gagatggagaaactccgtaacctccagtctcgtgacctggccctggaggtggaccgtgac
cgtgaccagctgatccagcagaccatgaggcagctcaacacccactttggccggcgctgc
accaccacacccatggctgtgcaccgcgtcaaggtcaccttcaaggacgagccaggcgag
ggtagtggcgtggcccgtagcttctacacggccatcgccctggccttcctgtccaatgac
aagctgcccaacctggactgtgtgcagagcgtcagcaagggcatgcaggccagcagtacg
tgtcatcacgattacaactcaagtatgacattgaatctgatgcagcggctgaggaacaga
gacagggagagggagcggaggagtggagggctccgagccggctctaggagagaccgagac
agggactcaaggagacagctgtccattgacacccggcctttcaggccagcctctgagggg
aaccccagtgacgaacctgacccactacctgcccacagacaggccctgggagagaggctg
tacccccgcgtccatgctatgcagccggcgtttgccagtaagatcacagggatgctgctg
gagctctccccagcccagctgctgttgctcctggccagtgaggactctctcagggccagg
gtggaggaggccatggagctgctcattgcacatggaagggaaaatggcgctgacagcata
ctggacctgggtctcctggaggctcctgagaaagcacagcagcaggagaaccgtaagcgt
catggctccacccgcagtgtggtggacatggagctggatgaccctgaagacggagatgac
aacgctcccctgttctaccagcccgggaagagaggcttctactctccccggcccggcaag
aacaccgaggccaggctcaactgcttcaggaacatcggcagaatactagggctgtgtctg
ctgcagaatgagctctgtccaattaccttgaacagacatgtcatcaaggtgctgctcggc
agaaaggtgaactggcatgactttgccttctttgacccggtaatgtacgagagcctgcga
cagttgatccgtcactctcaggctggagaggcagaggctgtgtttgcagccatggacctg
gccttcgccatagacctgtgtaaggaggaaggggctggacaggtggagctgctgtcaggt
ggggtcaacatgcctgtgactcctcttaacgtttacgaatatgtgagaaagtacgccgaa
cacaggatgctggtggttgccgagcaacctcttcatgcgatgaggaagggtctgttggat
gtccttcctaagaacgccctggaggacttgacagctgaggacttcaggctgctggtcaat
ggctgtggagaggtcaacgtgcagatgctcatcagcttcacttccttcaatgatgaatct
ggtacaaagaccttggcccgtattcacaaagaatctcagagggaaaatgctgataagttg
ttgcagttcaaacgctggttttggtccatcgtggagaagatgagcatgactgagaggcaa
gatctggtgtacttctggacctccagtccatctctgccagccagtgaggaaggcttccag
cccatgccctccatcaccatcaggcctccggatgaccagcacctgcccacggccaacacc
tgcatctcgcgtctctacgtgccactctactcctccaaacagattctaaaacagaaactc
ttactagccattaagaccaagaactttggttttgtgtag
DBGET
integrated database retrieval system
