Oncorhynchus masou masou (cherry salmon): 135520420
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Entry
135520420 CDS
T10723
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1-like isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04621
NOD-like receptor signaling pathway
omm05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
135520420
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135520420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
omm04054
]
135520420
Pattern recognition receptors [BR:
omm04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
135520420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
LRR_4
NOD2_WH
LRR_6
AAA_16
AAA_18
NPHP3_N
AAA_22
ATPase
AAA_30
AAA_29
RNA_helicase
NTPase_1
Motif
Other DBs
NCBI-GeneID:
135520420
NCBI-ProteinID:
XP_064802047
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All DBs
Position
29:69755182..69761326
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AA seq
954 aa
AA seq
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MHIMGSSAEEARAGLTGHVSTVQLLTLHRELLVSQVKSTQCILDNLLQSGFLCIEDTEII
QRSATKTDQVRKILELVQSKGEQACEYFLYILYKVYDAYIDLQPWLKEINYQPPDFIQDI
PVKNTDPISRYCDKLRQELGRDTRFIASYTKQEETLLEELYTDTLMELLNDRNESLGHLE
GLEQLLGEQGVFNPQAETVLITGDAGVGKSILLQKLQRLWSNRELEQTDAMFFFKFRCRM
FSTFKETDEISLRDLLFKYNCYPDQDADNEVFSYILRFPEKVLFTFDGYDEIHADLDLEN
MPEVVSPEERTHPLLVLINLLCGKLLNGSRKVLTARTGTEVQSRVIRKRVALRGFSPAHL
QTYTNLHFKEQEHRDLVSVQLDASPDLCGLCSIPLFCWIVFKSFKHLHSVYDDFELPEAC
VTLTNIFLLLSEVFFSRGAAPPPGLLTRNTRCPADTFRAGLRPLTAFSKLALLGMERGGF
VFDQEVVTSCGLTEDDLQVGFLRPVSRYDACGNPSTFEFFHLTLQSFLAAFSLVLDEHAS
EGNILKFFTECSRRDNTSCLSCVFPCIGGFSKPRGKDPFKTNEHLQYANLFLCGLLSKAN
AGLLEHMVPPALLKRKRAVLKSYLSTSVRSHLRGLPLHSTEQEGSKMHVLPNFLWMLRCI
FETGSKEVAQLTAKGITADYIKLGYCNVFSGDCSALNFVLQHRRKRLGVDMDNNNISDYG
VKQLRPSFSKMTVVRLCVNQISDSSVEVLAEELIKYRVVEVLGLYNNLITDIGAKLIAHI
IEECPKLRVVKVGSNKFTSVGGKYLASAIQKSTSIFDVGMWGNRIGDEGARAFAEALRNH
PSLTNLSLSANGITSEGGRHLAEALKCNTMLRIFWLVQNELSDDVAPDMAELIRSNTGLS
HLWLINNQLTVDGIRQLSEALSHNTSLKEICLKGNCLSEEEEKLFEAEGRLRFH
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgcatattatgggctccagtgccgaagaagcccgtgctggactaacgggccatgtgtcc
actgtccaactgctcacgttgcaccgtgagctactagtttcccaagtgaagagcacgcag
tgcattctggataacctcctacaaagtggctttctgtgtattgaggatacagaaatcatc
cagcgctcagccaccaagacagaccaggtgcgtaaaatcctggaattggtccaaagcaaa
ggggagcaggcatgtgaatacttcctatatattctctacaaagtttatgatgcatacata
gacctccaaccatggcttaaagagatcaactaccagccaccagacttcatacaggacata
ccagtgaagaacacggaccctattagtaggtactgtgacaagctgaggcaagagctgggc
cgagacacacgcttcattgcatcctacaccaagcaagaggaaaccctgctggaggagctc
tatacagacaccctgatggagctcctgaatgaccgcaatgagagccttggccacctggag
ggtctggagcagctcctgggagagcagggtgtctttaacccacaggcagagacggtgctc
atcacaggggacgctggggtgggcaagtccatcctcctccagaagctccagaggctgtgg
tccaatagggagctggaacagacagacgccatgttcttcttcaagttccgctgtaggatg
ttcagcacattcaaggagacagacgagatctcactcagagacctgcttttcaaatacaac
tgctaccccgaccaagatgcagacaatgaggtgttcagctacatcctccgcttccccgaa
aaggttctctttacgtttgacggctatgatgagatccatgctgatctggacctggagaac
atgcctgaggtggtttctccagaggagaggactcacccacttctggtgctcattaacctg
ctctgtgggaagctgctcaatggttcccggaaagtccttactgctcggacaggcaccgag
gtccagagcagggtgatccggaagagggtggcactgcgtgggttctctccggcccacctt
caaacctacaccaacctacacttcaaagagcaggagcacagggacctggtctcagtccag
ctggatgccagccccgacctctgtggcctctgctccatccccctcttctgctggatcgtc
ttcaagagctttaaacacctgcactcagtctacgacgactttgagttgccagaggcttgc
gtgaccctcactaacatattccttctgctttctgaagtcttcttcagccggggggccgct
cccccaccgggcctcctgacgagaaacaccaggtgccccgctgataccttcagggcaggg
ttgaggccactgacagccttctccaagctggctctgctgggcatggagagaggaggattt
gtgttcgaccaggaggtggtgacctcctgtggcctgactgaggacgaccttcaggtgggt
ttcctccgaccggtcagccgctacgatgcctgtggaaacccttctacctttgagttcttt
catctcaccctacagtccttcttggctgcattctccctggttctggacgaacacgccagc
gaagggaacatcctcaagttcttcaccgagtgcagcaggagggacaacacatcttgttta
tcatgtgtcttcccctgcatcggtggcttctccaaacccaggggaaaggacccgttcaag
accaacgagcatctccagtatgccaacctcttcctgtgtggactgctgtctaaggccaat
gccggcctgctggagcacatggttcctccagcgctactgaagaggaagcgagcggtcctc
aagtcctacctgtccaccagcgtgaggtcccacctccgcggtctgccactccacagcaca
gagcaggagggcagcaagatgcatgtcctgcccaacttcctgtggatgctgcgctgcatc
ttcgagacaggaagtaaagaggtggcccagctgactgcgaagggcatcacagctgactac
atcaagctgggctactgtaatgtgttctctggcgactgcagtgccctcaactttgtgctg
cagcaccggcggaagaggctaggggtggacatggacaacaacaacatcagtgactatggg
gtcaagcagctcagaccttcattcagtaaaatgactgtggtgaggttgtgtgtcaatcag
atctcagacagcagcgttgaagtattggctgaggagcttatcaaatacagagtggtggag
gttttgggactttacaataatctcattacggacatcggagccaagctaatcgctcatatc
attgaggaatgtcctaagttaagagtcgtcaaggttggcagcaacaagttcaccagtgtg
ggtggcaagtatctggccagtgccattcagaagagcacatctatctttgacgtgggaatg
tgggggaaccgtattggtgacgaaggagcaagagcattcgcagaggccctgaggaatcac
ccaagtcttaccaacctcagcctctcagccaatggcatcacttcagaaggtgggaggcac
ttggccgaagcactaaaatgcaacactatgctcagaatcttctggttggtgcaaaacgag
ttgtcagatgatgtagcaccagacatggcagagctgatcagatccaacacgggtctatct
cacctctggttaatcaataatcagctgacagtggatggaatcagacagctgtcagaggct
ctctcccacaacacatcactcaaagagatctgtttgaaaggaaactgtctttctgaagag
gaagagaagctgtttgaggctgagggaaggctccgcttccactga
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