Oncorhynchus masou masou (cherry salmon): 135520454
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Entry
135520454 CDS
T10723
Name
(RefSeq) neural cell adhesion molecule 1-like isoform X1
KO
K06491
neural cell adhesion molecule
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
omm04514
Cell adhesion molecule (CAM) interaction
omm04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
135520454
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
135520454
04517 IgSF CAM signaling
135520454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135520454
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135520454
04090 CD molecules [BR:
omm04090
]
135520454
00536 Glycosaminoglycan binding proteins [BR:
omm00536
]
135520454
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
omm00537
]
135520454
04091 Lectins [BR:
omm04091
]
135520454
Membrane trafficking [BR:
omm04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
135520454
Cell adhesion molecules [BR:
omm04515
]
Immunoglobulin superfamily
NCAM1/2
135520454
CD molecules [BR:
omm04090
]
Proteins
135520454
Glycosaminoglycan binding proteins [BR:
omm00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
135520454
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
omm00537
]
Others
135520454
Lectins [BR:
omm04091
]
I-type lectins (Siglecs)
135520454
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
FN3_DSCAM-DSCAML_C
fn3
V-set
VEGFR1-3_N_Ig-like
Ig_VEGFR-1-like_5th
Ig_5
Fn3_ROS1
Ig_4
Ig_PDGFR_d4
C1-set
Ig_MYOM1
BARF1_ig2
DUF4690
Motif
Other DBs
NCBI-GeneID:
135520454
NCBI-ProteinID:
XP_064802104
LinkDB
All DBs
Position
29:complement(72613938..72639277)
Genome browser
AA seq
705 aa
AA seq
DB search
MAESMLILRMCSIMLVLGFSEAKMEIITSKPDVLLGENAMLLCKAGGEGDITWQKDGEDA
EEDQIEKVDETSSKLFIRNAKMEDSGRYTCLCEFDTGHRDDASFVIFVYERPSFGETPAY
HEFLEGQDAVITCMVTGKPVVEVNWERDHEKLHSEAGRITRLKDNSLQINNINRKDRGMY
TCEAKIKDRPIFGKLDISISVNVPPTAKIHEEVKKVTAGPETNVSLSCLVEGVPQPNIIW
TVPDSSDESRYKYNSDKSELVISSVVRSDYGEYICTAKNKISESSAMIMLDVSEHPVAVL
SQEKMELEPGQTLSVSCNVSGHPMPALQWVRKTNNDHLLTVDTGGGRVRMEDGYVLVVDN
VTSSDGGLYSCMAISPAGNASTDFSLQTWPGKASQVSGTPGPTSVHFTLGASLVDGGSPI
THFTLQWKTGRENNWQERVIQSTDPLVIKDLNPYTTYSVRFAPQNHLGQGGFSEELTVRT
QGIRGEPDSPVLVASEGKVEGNMFSIPLTQLDSGGSPITHYTVRYRVNKVDEDWREKDLP
SNSTVINLHDLQYKSDYHVEVLAVNPYGSSSPAKLNFNVPQSVAKMNKGGMGKGAVAGIV
IAIFLALLIAVDATCCYTNRCGMLMFLAVKLFGQKVPGMKTVEEGDGISNGALKLNGLGL
PRDSIPNLQTQNGEKNGLQAEVTCDKAPLTKFEKTSPNGDPATEA
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatcgatgctcatcttgagaatgtgttccataatgctggtccttggtttttca
gaggccaaaatggaaatcatcaccagcaaaccagatgtgttgctgggtgagaatgccatg
ctcctctgcaaagctggtggggaaggagacatcacctggcagaaagatggagaggatgct
gaagaagaccagattgagaaagtggatgagacatcgtcaaaactgttcatcaggaatgcc
aagatggaggattcaggacggtacacatgcctctgtgaatttgacacaggccacagagat
gatgcatcttttgtcatctttgtctacgagcggccatccttcggggaaacaccggcctac
catgagttcctggagggtcaagatgcggtcatcacctgcatggtcactggcaagccggtg
gtggaagtcaactgggagagggaccatgagaaactgcactctgaagcaggtcggatcaca
agactaaaagacaactctctacagatcaacaacatcaacaggaaggatcgaggaatgtat
acctgtgaggctaaaatcaaagaccggcccattttcggaaagctcgacatctctatctcc
gtcaacgttcctcccacagcgaagatccatgaggaggtgaagaaagtcacggccggacca
gagaccaatgtctccctcagctgcctggtcgagggagtcccccaaccgaacatcatctgg
acagtcccagactcttcagatgagtcccgctacaagtacaactcagacaagagcgagctc
gttatctcgtccgttgtcaggagcgactacggagagtacatctgcacggccaagaataaa
atctcagagagcagtgccatgatcatgctggatgtctcagagcatcctgtagcagtgctg
agccaggagaagatggagctggagccaggccagactctctcagtgtcctgtaacgtctca
ggacaccctatgcccgcgctgcagtgggtcaggaagaccaacaatgaccacctgctaaca
gtggacactggtggaggtcgagtgagaatggaggatggctatgtcctggtcgttgacaat
gtgacatcctcagatggagggctgtacagctgcatggctatcagtcctgctggcaacgcc
tccacagacttcagcctgcagacctggccaggtaaagcatcccaggtaagtggcacccca
gggcccacatcggtccacttcaccctgggggcttccctggtggacgggggctctcccatc
acccacttcaccctccagtggaagacaggacgtgagaacaattggcaggagagagtcatc
cagtccacagaccccctggttatcaaagatctgaatccctacaccacctactctgtccgg
tttgccccacagaaccacctgggtcagggaggcttctccgaagagctcaccgtccgcaca
cagggcatacgaggggaaccagacagcccggtcctggtggccagcgaggggaaggttgag
ggcaatatgttctcaatccctttaacacagttggacagcggaggctcccccattacccac
tacaccgtccgctacagagtgaataaggtggacgaggactggagggagaaggacctgccg
tccaactcgacagtgatcaacctccatgacctgcagtataaatcagactaccacgtggag
gtgctcgccgtcaatccctacggctcctccagccccgccaagttgaacttcaatgtccca
cagtctgtagccaagatgaataagggtgggatggggaaaggggctgtggcaggcattgtc
atagccatcttcttggcgctattgatcgctgtggacgccacctgttgctataccaaccgc
tgcggcatgctgatgttcctggctgtcaagctgtttgggcagaaggtccctgggatgaag
actgtggaggagggtgacggcatctctaatggagccttgaagttgaatgggctaggacta
ccgagggatagcatcccaaatctgcagacacaaaatggggaaaagaatgggttgcaggcg
gaggtcacgtgcgacaaagcgccccttaccaaattcgagaagacgtcccccaatggagat
cctgccactgaggcctga
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