Oncorhynchus masou masou (cherry salmon): 135520521
Help
Entry
135520521 CDS
T10723
Name
(RefSeq) probable ATP-dependent RNA helicase ddx6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03018
RNA degradation
Brite
Enzymes [BR:
omm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135520521
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
135520521
mRNA degradation factors
5'-3' decay
Decapping complex
135520521
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Gene silencing
piRNA pathway
135520521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135520521
NCBI-ProteinID:
XP_064802201
LinkDB
All DBs
Position
29:74582418..74596433
Genome browser
AA seq
486 aa
AA seq
DB search
MSTARTENPTSIMGLNKPNGQFRGPLKPVGLTSGSLATAPQPDAQQKGGNIPQGSGGIRF
GDDWKKCLQLPQKDCRFRTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPVQEESIP
IALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDHIQAMVMVPTRELALQVSQISIQVS
KHMGGVKVMATTGGTNLRDDIMRLDETVHVVIATPGRILDLIKKGVAKVDKVQMMVMDEA
DKLLSQDFVVLIEDIISFLAKGRQILLYSATFPISVQKFMAKHLSKPYEINLMDELTLKG
ITQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKM
MQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRF
GHLGLAINLITSEDRFNLKSIEDQLVTDIKPIPGSIDKGLYVAEFHSADPDAEDEIRGKD
GELSAA
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagcaagaacagagaacccaacatccatcatgggactgaacaagcccaatggg
cagtttagaggaccactcaagccagttggactaacatcaggatccctggcaactgcccca
caaccagatgcccaacagaagggaggtaacattccccagggcagtgggggcatccggttt
ggcgatgactggaagaagtgcctgcagcttccacagaaggactgcagatttagaacatca
gatgtgacatcgaccaaggggaatgagtttgaggactactgcctgaagcgggagctactg
atggggatctttgagatgggctgggagaaaccatctcctgtacaggaggagagcatcccc
attgctctgtcaggaagggacatccttgcccgggctaagaacggcaccgggaaaagcgga
gcctacctcattcctctcctggagaggatagacctgaagaaggaccacatacaggccatg
gtgatggttcctactcgagagttggccctgcaggtgagccagatcagcatccaggtgagc
aagcacatgggcggggtcaaggtcatggccaccacaggaggcaccaacctgagggacgac
atcatgcgtctggacgagactgtgcatgtggtgatagccacaccaggcaggatcctggac
ctgataaagaagggagtggccaaagtggataaagtccagatgatggtgatggatgaggca
gacaagctgctgtctcaggactttgtggtcctgatcgaagacatcattagcttcctggct
aagggtcgtcagatcctactctactctgccaccttccccatcagtgtgcagaagttcatg
gcaaagcacctttcaaagccctatgagatcaacctgatggatgagctgacactgaagggc
atcacccagtactacgcctacgtcactgagaggcagaaagtccactgcctcaacaccctc
ttctccaggctccagatcaaccagtccattatcttctgtaactccacccagcgggttgag
ctgctggccaagaagataacccagctgggctactcctgcttctacatccatgccaagatg
atgcaggagtatagaaaccgtgtgttccatgacttcagaaacggactctgcaggaacttg
gtctgcactgatctgttcaccaggggaattgacattcaagcggtgaacgtagtgatcaac
tttgacttccccaagaacgctgagacgtacctgcatcgcatcggcagatcagggaggttt
ggtcacctgggtctggccatcaacctgatcacctctgaggaccgcttcaacctgaagtcc
attgaggaccagctggtgactgacattaagcccatccccggcagcatcgacaagggtctg
tacgtggcggagttccactctgccgacccagacgcagaagacgagatcagaggcaaggac
ggcgagttaagcgcagcataa
DBGET
integrated database retrieval system
