Oncorhynchus masou masou (cherry salmon): 135520658
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Entry
135520658 CDS
T10723
Symbol
tmc4
Name
(RefSeq) transmembrane channel-like protein 7
KO
K21988
transmembrane channel-like protein
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
135520658 (tmc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omm02000
]
135520658 (tmc4)
03037 Cilium and associated proteins [BR:
omm03037
]
135520658 (tmc4)
Transporters [BR:
omm02000
]
Other transporters
Pores ion channels [TC:
1
]
135520658 (tmc4)
Cilium and associated proteins [BR:
omm03037
]
Other cilia and associated proteins
Stereociliary proteins
135520658 (tmc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Bap31_Bap29_C
Motif
Other DBs
NCBI-GeneID:
135520658
NCBI-ProteinID:
XP_064802446
LinkDB
All DBs
Position
29:78482771..78492223
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AA seq
698 aa
AA seq
DB search
MEFSELQRPSSTIAHSYHGAQQLVRLRSKSVVSNQNAPQFNWGSPPSEGGEEGDSGPPKD
LRERPMTMRLKRAIREVQQMRVPVVTCWQSWKRSKAKSLSRFRADAGGVMSYVALWRKAL
HKIGGHFGGGVQSYFIFLRFLVVLNFLSFLLIAGFILIPSIVFRSTSTSNMTVDSTGPEV
CKVYDPNLQGLVVFYQYFLDLLSGTGFMEYSYMFYGYYNNTVAESSGFHYNLPLAYLLTS
VFYFAFCLICIIARMGSALRVAVVTGSGAAGSYSKMVFTGWDYGCQGDRATKLKQKSIHY
QLQVDLEEERLQKKALSLTLGQTVGLCSLRIFLMLISLALIGGAFFGIFKATVFSQVQVG
AEGILGLFWVYLPSIVITTGNFVVPFMCDQIALFERYSPSTTIIMALFRSVFLRMISLGV
LLFTLWSQITCFKDSPKCEPCQYNNKEYPCWETRVGQEMYKLALFDFLITIAMLILVEFP
RRLFVDHYSCVLTRWVGRQEFLVPPNVLGLVYGQTVVWTGALFCPLLPLINTLKFFILFY
CKKVTLFSNCRPAVKTFRSTTSTIFFLVVLLFGWGLALVAMIYSLAQIHPSMSCGPFRSL
TMMWSIVPNTFYTLSLTTQDFIFYMGSQAFSIPLFIFSCVVLCYVAALAAVYGKSVDLLK
AQLKLEGRDKQFLVKQIEELSREMGVPTRDQFDTGASN
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggagttcagtgagctacaaagaccgagctccactattgcccacagttaccatggtgcc
cagcagttggtgaggttacggagtaagtctgtagtgtccaatcagaatgcccctcagttc
aactggggttctcccccctcggaggggggagaggagggtgactcgggaccccctaaggac
ctcagagagcggcctatgaccatgcgtctgaagagagcgatacgagaggtgcaacagatg
cgtgtgcctgtggtgacttgctggcagtcgtggaaaaggagcaaggccaagtccctgagc
aggttcagagcagatgcagggggagtcatgtcctacgtagctctgtggagaaaggctctg
cataagataggaggccactttggcggtggtgtccagtcctacttcatattcctgcgcttc
ctggtggtgctcaacttcctgtcgttcttgctgattgctgggttcatcctcatccccagt
atcgtgttcagatccaccagcaccagtaacatgacagtggacagcactggtccagaggtg
tgtaaggtctatgatccaaatcttcaaggtctggtggtgttttaccagtacttcctggac
ttactctctggaacgggtttcatggagtactcctacatgttctatggttactataacaac
accgtggcagagagcagtggcttccactacaacctgcccctggcctacctcctcacctcc
gtcttctacttcgccttctgtctcatctgcatcatcgcacgcatggggagcgcacttcgc
gttgctgtggtaacaggcagcggtgctgccggcagttatagcaagatggtgttcactggc
tgggactacggttgccagggagaccgggccaccaaactcaaacagaaaagcatccactac
cagctacaggtggacctggaggaggagaggctacagaaaaaggctttgtctctaacctta
ggtcagacagtgggtctgtgttctctacgcatcttcctcatgctcatctccctcgccctc
ataggaggagctttctttggtatcttcaaggctactgtcttcagccaggtgcaggttgga
gcagagggcattctgggcctgttctgggtttaccttccttccatcgtcatcacaacagga
aactttgtcgtgcccttcatgtgtgaccagatagccttgtttgagagatattctcctagt
accaccatcatcatggcactgttcaggtcagtgtttctgcgtatgataagtctgggagtg
ctgctgtttactctgtggagtcagatcacctgctttaaagacagtccaaaatgtgagccc
tgccagtacaacaacaaggaatatccgtgctgggagacgcgtgtgggacaggagatgtac
aaactggccctgtttgacttcctcattaccatcgccatgcttatcctggtggagtttcca
cgcaggttgtttgtggaccactactcctgtgtactgacccggtgggtaggtcgtcaggag
ttcttggtgcctcccaatgtgctgggtctggtctacggtcagacagtggtgtggactgga
gctctgttctgccctctgctgcctctcatcaacacactcaagttcttcattctcttctac
tgcaagaaggtcactctgttttctaactgtcgcccggcggtgaagacattccgctccacc
acctccaccatattcttcctggtggtgttgctgttcggctggggcctcgccctcgtcgcc
atgatctacagcctggcccagatccatccctctatgagctgtggtccgttccgctctctc
actatgatgtggagtatcgttcccaacaccttctacactctctcgctgacaacacaggac
ttcatcttctacatgggctcccaggccttctccatccctctcttcatcttctcctgtgtg
gtgctgtgttatgtagcagctctagccgcagtctatgggaagagtgttgatctgctaaag
gcccagcttaaactggagggacgtgataagcagttcctggtcaagcagattgaagagctg
agtagagagatgggggttccaacaagggaccaatttgacactggtgcatcaaactga
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integrated database retrieval system
