Oncorhynchus masou masou (cherry salmon): 135520689
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Entry
135520689 CDS
T10723
Symbol
arnt
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator isoform X1
KO
K09097
aryl hydrocarbon receptor nuclear translocator
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
135520689 (arnt)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135520689 (arnt)
Transcription factors [BR:
omm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
135520689 (arnt)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS
PAS_3
PAS_11
HLH
PAS_9
PAS_4
Per3-like_PAS-A
PAS_2
bHLH_NCOA
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
135520689
NCBI-ProteinID:
XP_064802498
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All DBs
Position
29:79567661..79592597
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AA seq
773 aa
AA seq
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MLFNPDMDSSNPDIPDDSLGLGPGEAQASSSAVVPKGSNKRRAAPDFDDDDDDDGSKLFR
CDDDGGGGGDKERFARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMA
VSHMKSLRGSGNTAADGTYKPSFLTDQELKHLILEAADGFLFVVSCESGRVVYVSDSLTP
VLNQSQSDWLGSSLYDQLHPDDGDKLREQLSTAESNNTGRMLDLKTGTVKKEGQQSSVRM
CMGARRSFICRMRCGSCPVEPMSMNRLNFLRSRNRNGLGPPKDGEPQYVVVHCTGYIKSW
PPTGVNLTDEEADNIQGSHYCLVAIGRLQVTSCPSDTDINSISVPVEFISRHNCQGLFTF
VDHRSMATVGYQPQELLGKNILELAHPEDQELLRDSFQQVVKLKGQVLSVMFRFLSKTRD
WLWIRTSSFTFQNPFSEEIEYIICTNANVKTSTQDTLTPLSSSGVSLPPSLGESSPNFPP
VSHSPGQVAARQLQQQQAELGGGGRDGLYEAGQVTLPQMPVQAVTAAGTDHSKTMDKAEM
HPSMYPNTDQAKFLSSTSAPGVPIYPQDNNSYTTANRSNDTYSRSVGMAPQIGQASHSAG
QVLAQMSRQNGAPPSNSSPLQGGAALSWPGSAAGARPHFNNQQVVPQAGKALSPQFAMGS
FVGGSSSSFGAMPTTAAPTPTMGANYPNINPRASLNTNGYDGLGSGQQFPSRAAEAVWPQ
WQGQQQAQNRAEQHPHTQNNQPDIFPDVLAMLDQPANFNNDDFEIPIYPSFNE
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgttattcaacccggacatggactcttctaacccagacataccagatgactctctgggt
ttgggacccggtgaggcccaggcaagcagcagtgctgttgtgccaaaagggtccaataag
agacgagctgcgccagacttcgatgatgatgatgatgatgatggaagcaagctcttcagg
tgtgatgacgatggaggaggaggaggagacaaagagcgatttgccagggagaaccacagt
gagattgagcggcggcggaggaacaagatgactgcttacatcacagagctgtcggacatg
gttcccacctgcagcgcgttggcacggaaacctgataagctgaccatcctgcgcatggcc
gtgtcccacatgaagtctctgagagggagcggcaacactgcagcagacgggacatacaaa
ccatccttcctcaccgaccaggagctgaagcacctgatcctggaagctgctgatggcttc
ctgtttgtggtgtcgtgtgagagtgggcgggtcgtctacgtgtcagactccctgacccct
gttcttaaccaatcacagtccgactggctaggctcctcactctacgaccagctccacccg
gacgacggagacaaactacgagagcagctctctactgcagagagtaacaatacagggagg
atgttagacctgaagacaggaacagttaagaaggagggacagcagtcctccgtcaggatg
tgtatgggagccagacgatccttcatatgtaggatgagatgtggttcgtgtccagtggag
cccatgtctatgaacagattgaatttcctgcggagcaggaacaggaatggtctgggccca
cccaaggatggagagcctcagtatgtggtggtccactgcactggatacatcaagtcctgg
ccccccacaggggtgaatctaacagatgaggaagcagacaatattcaggggagtcactac
tgtctagtcgccatcggtagacttcaggtgacctcttgcccgagcgacacagacatcaac
agcatcagcgttccggtggagttcatctctcgtcacaactgccagggcctctttaccttc
gtagaccaccgcagcatggccacagtgggctaccagcctcaggaactgttgggtaagaac
atcttggagctggcccaccctgaggaccaggagctgctgagagacagcttccagcaggtg
gtcaagctgaagggtcaagtgctgtccgtcatgttccgcttcctgtccaagaccagagac
tggctctggatcaggaccagctccttcaccttccagaaccccttctctgaggagatagag
tacatcatctgtaccaacgccaacgtcaaaacctcgactcaggacaccctcacccccctc
tcgtcctcaggggtgtctttgcccccctcgctgggggagagcagtcctaacttcccccct
gtgtcccacagcccagggcaggtggctgccagacagttgcagcagcagcaagcagagttg
gggggcggagggagagatggtctgtacgaggcaggacaggttacacttccacagatgcct
gtccaggccgtgaccgcagctggaactgaccacagtaagaccatggacaaggcagagatg
cacccctccatgtatcccaacacagaccaggccaagttcctgtcctccacctctgccccc
ggagtacccatctaccctcaggacaacaacagctacaccactgccaaccgctccaacgac
acatacagcaggtcagtagggatggcccctcagatagggcaggcatcccactccgcaggc
caggtgctggctcagatgtcccgtcagaacggggcacccccctccaacagcagcccccta
cagggaggggcagcgttgagctggccggggtcagcagcaggggctcgaccccacttcaac
aaccagcaggtggtgccccaggcagggaaggccctgtctccccagtttgccatggggagt
tttgttgggggctcttcctcctcatttggggcgatgcccaccactgccgctccgaccccc
accatgggggctaactacccaaatatcaacccccgcgccagcctcaataccaacggatat
gatggcttggggtcggggcagcagttcccctccagggcagcggaggcagtgtggccccag
tggcagggccagcagcaagctcagaacagggcagagcagcacccccacacacagaacaac
cagcctgacatcttccctgatgttctcgccatgctggaccagccggccaacttcaacaac
gatgactttgagattcccatctacccctctttcaacgagtga
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