Oncorhynchus masou masou (cherry salmon): 135520694
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Entry
135520694 CDS
T10723
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115-like isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135520694
04121 Ubiquitin system [BR:
omm04121
]
135520694
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135520694
Membrane trafficking [BR:
omm04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
135520694
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135520694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-C3HC4
Zn_ribbon_19
zf-Nse
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_16
C1_2
HypA
Motif
Other DBs
NCBI-GeneID:
135520694
NCBI-ProteinID:
XP_064802505
LinkDB
All DBs
Position
29:79765483..79773309
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AA seq
325 aa
AA seq
DB search
MAEAAAVPPHRFFCHCCKGEVSPKLPEYICPRCESGFIEEVTEDSSLLEGGTNGTDDTAT
QFAEQLWHLLFVERPFTVDGDSPDSEPRVPGGGVGVGSGGLGLGGLGGLGGLGGGPIGGS
VPAGLGGPLGGPLGGGEHWGPGRPPRLHSQRRYRSRGSSRPDRSPAVEGIVQQFLAGLFA
NSGVPGSPPLSWTGMLHSNPGDYAWGQGGLDAVITQLLGQFENTGPPPAEKEKISSIPTV
NVSQDQADCSMECPVCKEDFAVGEPVRQLPCNHFFHSDCIVPWLEMHDTCPVCRKGLNGE
DSNTQNPPESPSLNTDPRTQERWSF
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagctgcggcggttcccccgcatcggttcttctgtcattgttgtaagggagaa
gtaagccccaagctcccggagtacatctgtcccaggtgtgagtctggctttatagaggag
gtaacagaagattccagtctgctagagggtggcactaacgggacagatgacacagccaca
cagtttgcagagcagctgtggcacctgttgtttgtagagaggcctttcacagtggatggt
gacagtccagactcagagccccgggtccctggtggaggggttggggtaggatcagggggg
ttaggtctgggggggctgggagggcttggaggcctgggaggaggtcctatcggagggtca
gtccctgctgggctaggaggacccctggggggtcctctgggagggggggaacactggggg
cctggtcgcccccctcgcctgcacagtcagcggaggtaccgctccagagggagcagcaga
cctgaccgctcacctgccgtagaggggatagtacaacagtttctggctggtctatttgcc
aactctggagttcctggctcacctcccctctcttggacggggatgctacactctaaccca
ggggactatgcttggggacaggggggactggacgcagtcatcacacagttgttaggtcag
tttgagaacacgggccctcctcctgcagagaaagagaagatctcctccatacctacagtc
aacgtgtctcaggatcaagcagactgcagtatggagtgtccggtgtgcaaggaggacttt
gcagtgggagagcccgtcagacagctgccctgcaaccacttcttccactcagactgtata
gtaccctggttggaaatgcatgatacgtgtcctgtgtgtaggaaggggttgaatggagaa
gacagcaacacccagaaccccccagaatccccctctctaaacacggacccccgcacacag
gagagatggtccttctga
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