Oncorhynchus masou masou (cherry salmon): 135520782
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Entry
135520782 CDS
T10723
Name
(RefSeq) DNA repair and recombination protein RAD54B-like
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
135520782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omm03400
]
135520782
DNA repair and recombination proteins [BR:
omm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
135520782
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
135520782
NCBI-ProteinID:
XP_064802638
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All DBs
Position
29:82741361..82768239
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AA seq
941 aa
AA seq
DB search
MRRSGAPSQVFGNMAKKPRFVPPGTSLAGPPDPPVGTLLEPEPLAPKLAPGNVLYKVQRS
LSAPAPPLALPVKAFSLAKSSPQAPGLSRALARVLSAADSKKNELEPEDPSFTEENTGDP
ADFRCSSQSPAGGCGPGVFGAGSGSGAGSDGPRYFSVMWCKASGRKHKRWQGDAVLVTRG
RTATLKDTEGKDIGKGSGYKVSELASLGEGETLMIGAKQVEVMGLISELDYNKGRCFLDV
HVEKEGPKISAPPPSRRPASKPFCRPTLLGGETDRGVAKPQEEGPCKPRHDPLAPGAIVM
PRPSTNHQWAYNKAGLPLVDVVVDPYLTTHLRPHQRDGLLFLYECVMGMRATCRYGAILA
DEMGLGKTLQSVALTWTLLKQGPYGGKPVAKLVLVVAPGSLVQNWGAEFKKWLGRERINV
YTVNQDHRVELFAASPLHSVLVISYEMLLRSLEVVQKLEFGLVICDEGHRLKNSSIKTSS
ALSGLSCTRRVILTGTPVQNDLQEFYAIIEFVNPGILGSSAAYRKVYEEPILRSRQPICT
EEERVLGEERAAELSRLTGLFILRRTQEIINRYLPPRLDWTVFCSPSPLQRELYQVLLSH
RVIRACLQGSTQTHTHLACITALKKLCNHPGLLYSTVQERSDGGSAEGSLYEGLRGVFPE
SYSSGGFSTADSGKLLVLSDLLTTIHHLSPTDRVVLVSNYTQTLDLLQDLCVHLGYTYCR
LDGNTPTIQRQRLVDNFNSPHSAHFLFLLSSKAGGVGLNLIGASHLVLYDIDWNPANDIQ
AMSRVWRDGQKKTVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDLGKGAEHTSFSSNEL
RDLFSLTDTPCLTHDLLHCSCSMDGTAPEEGEDEAPASDRPCQLGRQGDRGRAGQKHLSM
SELIQWRHFAGDTHTFRDAYLDHARTHISFAFQSTISHTTQ
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgctcaggggcccccagccaggtctttggtaacatggcgaagaagccccggttc
gtccctcctggaacctcactggctggtcctcctgatccccctgtgggtactctgcttgaa
ccggagcctctggcccctaaacttgccccggggaacgtgctctacaaggtccagaggagc
ctctcagcccctgcaccgccccttgccctgcctgtgaaggccttcagcctggctaagagc
agcccccaagccccaggcctgtccagagctctagccagggtgctaagtgcagcagacagt
aagaagaacgagctagagcctgaagacccttcctttacagaggagaacactggagaccca
gctgatttcagatgttcttcacagagtccggcaggaggctgtggtccaggtgtgttcggg
gcagggtctggtagcggtgctggttctgacgggccgcggtacttcagtgtgatgtggtgt
aaggccagcgggaggaaacacaaacgctggcagggagatgctgtcctggtgacacgaggg
cgcaccgccacgcttaaagacacggagggcaaggacatcggcaagggtagtggctataag
gtatcagagctggcatcgctgggtgaaggagagaccttgatgataggagctaaacaggtg
gaggtgatgggactcatatcagagctggactacaataagggccgctgtttccttgacgtc
catgtggagaaggaggggcctaagatatcagctcctcccccctcacgacgcccagcttcc
aaaccgttctgccgtccgacgctattgggaggagagactgataggggagtggccaagcct
caggaggaggggccctgtaaaccacgccatgaccctctagcaccaggagccattgttatg
ccccggccctcaaccaatcaccagtgggcgtataacaaggcaggcctcccactggtggat
gtggtggttgacccctacttgaccactcatctccgaccccaccagcgagacggtctgctg
ttcctctacgagtgtgtcatggggatgagggctacatgtaggtacggtgctatcctggca
gatgagatgggtctgggtaagaccctccagagcgtggctttgacatggacgctgctaaag
cagggcccgtacggcgggaagccggttgctaagcttgtgctggtggttgcccctggcagc
ctggtgcagaactggggggcggagtttaagaagtggcttggccgtgagaggatcaacgtc
tacactgttaaccaggaccacagggtggagctgtttgcagcgtctcctctccacagtgta
ttagtgatcagctatgagatgctgcttcgttctctggaagtggtacagaagctggagttt
gggctggtgatctgtgatgagggtcacaggttgaagaacagcagcatcaagacttcctct
gccctcagcggtctcagctgtacacgcagagttattctgacaggtactcctgtccagaat
gacctgcaggagttctatgccatcatagagtttgtgaacccgggcattctggggtcgtct
gctgcctacaggaaggtgtacgaggagccaatcctccgctcccgacagcccatctgcact
gaggaggagagagttttgggggaggagcgagcggctgagctctctcgtctgactggtctg
tttattctgaggcggacccaagagatcatcaaccgttacctcccaccacgtcttgattgg
acagtgttctgtagcccctcccccttgcagcgggagctgtaccaggttctcctctcgcac
cgtgtcatccgagcctgtctacaggggtcgacacagactcacacacacctcgcctgcatc
accgccctgaaaaagctctgcaaccacccaggactgctctactccactgtacaggagcgt
tctgatggcggctcagcagagggttctctgtatgaagggctaagaggtgtctttccagag
tcttactcttctgggggcttcagtacagctgactcagggaaactactggtcctgtctgac
ctactgaccactattcaccacctcagccctactgacagggtggtgttggtgtccaactac
actcagacgttagacctactccaggacctgtgtgtccacctgggctacacctactgtcgc
ctggacggcaacacccccaccatccagaggcagcgattggtggacaacttcaacagccct
cactccgcccacttcctcttcctcctgagttctaaagccggaggggtggggcttaacctg
atcggcgcctcccacctggtcctatacgacatcgactggaaccctgccaacgatatacag
gcaatgtcacgagtgtggagagacggacagaagaagactgttcacatctaccgcctgctc
actgcaggtaccatagaggagcgtatcttccagaggcaggtgtccaaacagggcctttct
gggacagtggtggacttggggaaaggggcggagcacaccagcttctcctccaatgagctg
cgagatctcttcagcctgacggacacaccctgtctcactcacgacctgctacactgcagc
tgcagtatggacggaacagccccggaagaaggagaggatgaggcacctgcgtctgatagg
ccgtgccagctgggtcgtcaaggtgaccgtggtagggcagggcagaagcatctgagcatg
tcagagctgatacagtggagacacttcgcaggggacacacacaccttcagagatgcttac
ctggaccatgcacgaacccacatctccttcgccttccagtccaccatctcacacaccact
cagtaa
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