Oncorhynchus masou masou (cherry salmon): 135520938
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Entry
135520938 CDS
T10723
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03013
Nucleocytoplasmic transport
omm03015
mRNA surveillance pathway
omm03040
Spliceosome
Brite
Enzymes [BR:
omm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135520938
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
135520938
mRNA cycle factors
Stress granule specific factors
135520938
Spliceosome [BR:
omm03041
]
Complex C
Other components
EJC/TREX
135520938
Ribosome biogenesis [BR:
omm03009
]
Eukaryotic type
90S particles
Helicases
135520938
Translation factors [BR:
omm03012
]
Eukaryotic type
Initiation factors
eIF-4
135520938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135520938
NCBI-ProteinID:
XP_064802889
LinkDB
All DBs
Position
4:complement(522330..534533)
Genome browser
AA seq
406 aa
AA seq
DB search
MEVATVPRTRRLLKEEDMTKIEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHSCIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaagtagccaccgtaccgcgcacgaggcgtctgttaaaggaggaagacatgaccaag
atcgagtttgagaccagcgaggaggtcgatgttactcctactttcgacacgatgggccta
cgagaggatctcctccgtgggatatacgcatacggattcgagaagccttccgcaatccaa
caaagagcaattaaacagatcatcaagggtagagatgtcattgcacagtctcagtccgga
acaggaaagactgccacgttttgcgtatcagtactgcagtgtcttgacattcaggtgcgt
gaaacccaagcactgatcctggctcccaccagagagttagctggacagatacagaaggtg
ctcctggccctaggtgactacatgaacgtccagtgtcattcctgtatcggagggacaaac
gtgggtgaggacatccgcaaactggactatggccagcacgtggtagcagggacccctggg
agagtgtttgatatgatccgcaggaggagtttgaggacgcgtgccatcaagatgctggtg
ctggacgaagcagacgaaatgctcaacaagggtttcaaagagcagatctacgacgtgtac
cggtatctgccccccgccacccaggtctgtctgatcagcgccacgctgccccacgagatc
ctggagatgaccaacaagttcatgaccgaccccattcgcatcctggtcaaacgtgatgag
ttgactctagagggcatcaagcagttcttcgtggcagtagagagggaggagtggaagttt
gacaccctgtgtgacctgtatgacaccctcaccatcacacaggctgtcatcttttgcaac
accaagcggaaggttgactggctgactgagaagatgagggaggccaacttcactgtttcc
tccatgcacggagacatgccccagaaggagagggagtccatcatgaaagagttccggtcc
ggtgccagccgagtgcttatctccactgatgtgtgggcccgaggtctggacgtgccccag
gtgtccctcatcatcaactacgacctgcccaacaacagagagctgtacatccacaggatt
ggccgatcgggtcgttacggccgcaagggtgtggccattaactttgtgaagaatgacgac
atccgtattctccgtgacattgagcagtactattccacacagatcgatgaaatgccaatg
aacgtggctgacctgatctaa
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