Oncorhynchus masou masou (cherry salmon): 135521056
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Entry
135521056 CDS
T10723
Name
(RefSeq) partitioning defective 6 homolog gamma-like
KO
K06093
partitioning defective protein 6
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04144
Endocytosis
omm04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135521056
09144 Cellular community - eukaryotes
04530 Tight junction
135521056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135521056
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
135521056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
Herpes_DNAp_acc
Motif
Other DBs
NCBI-GeneID:
135521056
NCBI-ProteinID:
XP_064803053
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All DBs
Position
29:complement(99140611..99144586)
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AA seq
441 aa
AA seq
DB search
MNRSLSKSQSSLQYRATVEVKSKYGAEFRRFSLNRSNPGEFQDFYKLILRLHRLTSSDVI
IGYADIQGELLPINNDGNFCKAVSTAPTLLRIFIQRQEEVDDNTFCPNATVTRRRKVPAI
PLPRGDVNRKRPTVLISRPQDFRPISSIIDTDFLPASQRRVRLYRQGSERPLGFYIRDGT
TVRVTPHGLEKVPGIFISRLVPGGLAESTGLLAINDQVLEVNGIEVMGKVLDQVTDMMIA
NSHNLIITVKPVNQRNNIVRTGSWMSGINSGSVSSLDYQSYHSTPICQSYHSMPICVGAY
SFTDDELQSDEDLDIVIERRLRNSSRRSSASTSTASRSQAWSQPQQSPRPSPRPSTRRPP
RRPYSVISSTSYHSQPSLTNLNLRLNRDLTLQQHYGSSPAIREMNGGVFNHSSLLTLRTE
LRRSLVLQRGGVEEDGMVITL
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggagtttaagtaaatcgcagtcttctttgcagtatcgtgcgacagtggaagtg
aaaagcaaatatggagcagagttcagaaggttttctcttaaccgttccaaccccggggag
ttccaagatttctacaagctcatcctgcgcctgcaccgtctaaccagcagtgacgtcatc
attggctatgcagatatccagggagagctactacccatcaataacgatggcaacttctgc
aaggccgtgtccactgctcctaccttactgcggatcttcatacagagacaagaggaagta
gacgacaataccttctgccccaatgccactgtgacgcgccggaggaaggtgccagcgatc
cccctgccacgcggcgacgtgaaccgcaaaaggcccacggtcctcatcagcaggccgcag
gacttccgtcccatctcgtccatcattgacacagatttcctgcccgcatctcagcgccgg
gtgcgcctttaccgccagggctcagagaggcccctggggttctatatccgggatgggacc
actgtgagggtgactccccacggcctggagaaggtacctgggatcttcatctcacggctg
gtccctggaggcctggctgagagcacagggctgctggccattaacgaccaggtgcttgag
gtgaatgggattgaggtgatgggcaaggtgttagaccaggtcacagacatgatgatcgca
aacagtcacaatcttatcatcacggtgaagccggtgaaccagcgtaataacatagtgcgt
accggcagctggatgtcggggataaactcaggcagtgtcagctctttagactaccagagt
taccacagcacgcccatctgtcagagttaccacagcatgcccatctgtgtgggagcctac
agtttcactgatgacgagctgcagagcgacgaggacttggacattgtgattgagagaaga
ctcagaaactcatcccgtcgctccagtgcctccacctccacagcctcccgttcccaggct
tggtcccagccccagcagagtcctaggccttctcctaggccatccacccgacgccctccc
cgtcgaccttactctgtcatctcctcaacctcctatcactcacagcccagcctcactaac
ctgaacctcagactgaaccgagacctgaccctgcagcagcactacggcagcagcccagcc
atcagggagatgaatggaggtgtgtttaaccacagcagcctgctcaccctgaggacagag
ctacgacgcagcctggtgctacagaggggaggggtggaggaggacggaatggtcatcacc
ttgtga
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