Oncorhynchus masou masou (cherry salmon): 135521081
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Entry
135521081 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: iroquois-class homeodomain protein irx-1-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135521081
Transcription factors [BR:
omm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
135521081
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
SSTK-IP
MRP-S32
Motif
Other DBs
NCBI-GeneID:
135521081
NCBI-ProteinID:
XP_064803095
LinkDB
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Position
29:complement(102620592..102625029)
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AA seq
457 aa
AA seq
DB search
MSFPQLGYPQYLSASQAVYGGDRPGXLTPSSRGGSSELAGNQSAAAAAVTSVLGMYANPY
TAHNYSAFLPYSSADLALFSQMGSQYELKDSPGVHPGSFAAHTSPAFYPYGQFQYGDPAR
PKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK
VTWGARSKEDEDGNIFGSDNEGDAEKNDDEEEIDLESIDIDKIDDNDGDQSNEEDDDKPE
GRERNRELDSLEKRRAFALQHEVFDKSKNSISSVKELSDSNSNTRGVSPDRQGRFQLPVN
NKPKIWSLAETATSPDSSVKSTSPSGPTGHTPPQMQHPAFLPSHGLYTCQIGKFHNWTNG
AFLGQNSLLNVRSFLGVNQHHHHNLHLQTQLQQQQASVLVSPGASPQLSPKHIDRENVVR
SASPPTQSLKSSFRPLHDGPRTQQEAPQLVLTALSSA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccccagttgggctaccctcagtacttaagtgcctcccaagcggtgtacggc
ggggatcgcccggggntcctgactccgtcgtcccggggagggagctctgagttagcggga
aaccagtcagctgctgcggctgcagtcacctcggtgttgggcatgtacgcaaacccctac
actgcacacaactacagcgcattcctgccttacagcagcgcagacctggctctgttctct
caaatgggctcccagtacgagctgaaggacagtcctggcgtgcaccccggcagcttcgcg
gcccacacctcgccagctttctacccttacggtcagttccagtacggggacccggccagg
cccaagaacgcgacccgggagagtaccagcaccctgaaggcctggctcaatgagcacagg
aagaacccctaccccaccaagggagagaagatcatgttggccatcattactaagatgacc
ctgacacaggtgtccacctggttcgctaacgccaggaggaggctgaagaaggagaacaag
gtgacgtggggagccaggagtaaggaggatgaggatggaaacatcttcggctctgacaac
gagggagacgcggagaagaacgacgacgaggaggagattgatctagagagcatcgatata
gacaagatagacgacaacgatggagatcagagcaatgaggaggacgatgataaaccggag
ggcagagagcgaaaccgagaactggacagtctggagaaacggcgggccttcgccctgcag
cacgaggtctttgacaaatctaagaactcaatttcctccgtgaaggaactttctgatagc
aacagcaacaccagaggtgtgtccccggacagacagggacgttttcagctcccagtgaac
aataagcctaaaatctggtcgttagctgagacggctaccagtcctgatagttctgtcaag
tccacctctccctccggccctaccggtcacaccccgcctcagatgcaacacccagccttc
ctgccctctcacggactatacacctgtcagataggcaagttccataactggaccaacgga
gctttcctggggcagaactctctgctcaatgtccggtcgtttctcggagttaatcagcac
catcatcataacctccacttacagacccagctgcagcagcagcaggcctcggtgttggtg
tcgcctggagcctcgccacaactcagccccaagcacatagaccgtgaaaacgttgtaaga
agtgcctctcctccaacgcaatctctgaagtcctcattcagaccccttcatgatggcccc
aggactcagcaagaagccccgcagctggttctaacggccctctcctcggcttga
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