Oncorhynchus masou masou (cherry salmon): 135521806
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Entry
135521806 CDS
T10723
Name
(RefSeq) integrin alpha-10-like
KO
K06586
integrin alpha 10
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04510
Focal adhesion
omm04512
ECM-receptor interaction
omm04810
Regulation of actin cytoskeleton
omm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135521806
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135521806
09142 Cell motility
04820 Cytoskeleton in muscle cells
135521806
04810 Regulation of actin cytoskeleton
135521806
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135521806
Cell adhesion molecules [BR:
omm04515
]
Integrins
Integrin alpha subunits
135521806
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
Integrin_A_Ig_3
VWA_2
FG-GAP_3
FG-GAP_2
ITGAX-like_Ig_3
vWA_SIBA-E
Metallopep
Motif
Other DBs
NCBI-GeneID:
135521806
NCBI-ProteinID:
XP_064803614
LinkDB
All DBs
Position
30:complement(3252184..3350940)
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AA seq
1170 aa
AA seq
DB search
MELHKYLLLLKFIVLLKGLCECFNIDVKRPRIYTGPEEALFGFSVLQHDNAGDKSMLVGA
PWDGPSNTRTGDVYKCIVGEERSSNCTKTNLGESTLQNVSRNLKNSHLGMTLSPDSPDGF
LACAPLWSQECGTSVFSTGICASVSDDLEPRETIAPTAQRCATYMDIVIVLDGSNSIYPW
YEVQNFLSNILSKFHISPEQMQVGVLQYGEVAVHEWSLRDYQTTQEVVEAAKNISRQEGR
ETRTAYAIHMGCTEAFSPERGAREGATKVMIVVTDGESHDGEELPDALEECEKRNITRYA
IAVLGHYIRRQQDPETFISEIKYIASDPDDKYFFNVTDEAALNDIVDALGDRIFTLEGTL
GYNESSFKFEMSQIGFSTHVLDDGILFGMVGAYDWDGGVLKEGAKGRIMPTREAFESEFP
QELKNHAAYLGYTVSSVIVGDWRRLYVAGAPRFKHKGKVILFELSDNGDVNIAQALNGEQ
IGSYYGSEVCGLDVDQDGITDVLLVAAPMYLGPGNKEAGRVYIYSLSGEEVFMSNGTLMA
EDRFQDARFGYALASAPDLNHDGYTDLLVGAPLEDGHNGAIYVYHGQGIHIIHNYKQRIA
GSSLSPSLQYFGRSVSARLDLDGDGLLDLAVGAQGSAVLLSSRSIVQINMSLSFQPHSIN
VIQKTCQRGGRESACLNATACFLALSRSPGTHSSSFELSVVAMLDERKLTARALFDDSNQ
RQTQLGVRVHTGQNVCHNLPFHVFDTADYIRPISFSLRFKINDTESGPVLDEGWPTTFKR
WIAFFKDCGEDDVCVTDLVLQAHMDISGTRQQPYVIRSPRRRLAVEVQLQNRLENAYNTS
LTLHYSRNLHFSSLSIREDTQLKIECTSLSSNSHSCNVSYPVFRSHSKVNFMLEFEFSCT
SLLSKVQMKLTVASDSVEREATLGDNSVQLQTVVQYEPELFITSDSNLNRYEVHPTRTIS
EAIGPEFYTHFRLQNLGCYSVSNLELRLSLPSVAAGDRVFMAVTEVFSYNVTGVNCSVDS
DVSQLKDRQRDVRPLHPEDMQQTDLLNCSRSWCVEVVCEVQQLHRGQTALIRVSRRVHDN
FFRQAKFKVVRIVSAYRLAAQESNLVTLGSGAIWRETVLEVLKGRAIPISLWILIGSIIG
GLLLLALIIFAMWKLGFFTRKQVKDEDLED
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcacaaatacctgctactcctcaagttcatagttctcctcaaagggttgtgt
gagtgtttcaacatcgatgttaagcggcctcgtatctacactggtccagaggaggcccta
tttggtttctctgtgctacagcatgacaatgcgggggacaaatcgatgctggttggtgct
ccttgggatggaccttccaataccaggacaggagacgtgtacaaatgcatcgtgggagag
gagaggagctccaactgcaccaaaaccaacctaggtgagagcacgttacagaatgtatct
agaaacctgaagaactctcatctaggaatgaccctcagtccagactcacctgatggattc
ctggcgtgtgcgcccctgtggtctcaggagtgtggtacgtcagtcttcagtacggggatt
tgtgcttctgtcagcgacgacctggaacctagagagaccatcgcccctacagcacagaga
tgtgcaacatacatggacatagtgatcgttctggatggctccaatagtatctatccctgg
tatgaagtccagaacttcctcagtaacatcctcagcaagttccatatcagcccagaacag
atgcaggtgggggttttgcagtacggtgaggttgcggtccatgagtggtcactgagagac
taccagacaacacaggaggtggttgaagcggctaagaacatcagccgacaggaggggcgg
gagacacgcacagcatacgccatccacatgggctgtacggaggcattcagccctgagcgg
ggggcgagggagggggccaccaaggtcatgatcgtggtgacggacggagagtcacatgat
ggggaggagctacccgacgctctggaggagtgtgagaagagaaacataaccagatatgca
atcgctgtattgggtcactacatccgcaggcagcaggaccctgagacgtttatcagtgag
atcaagtacattgccagcgaccctgacgacaaatacttcttcaacgtgactgacgaggcg
gcgctcaacgacatcgtagatgcactaggagaccgcatcttcactctagaggggacgctg
gggtacaacgagagctccttcaagtttgagatgtcccagattggcttctccacacacgtt
ctcgatgatggcatcctgtttgggatggtgggggcgtatgactgggacggaggggtgctg
aaggagggcgctaagggccgcatcatgcccaccagagaggcctttgagtcagagttcccc
caggagctcaagaaccatgctgcctatctgggctatacagtgtcgtcagtgatagtggga
gactggaggaggctgtatgtggctggagctcccaggttcaaacacaaaggaaaggtcatt
ctgtttgaactgagtgacaatggagatgtcaacattgcacaggccctcaatggagaacag
attgggtcgtactatggcagtgaggtgtgtgggttggacgtggaccaggatggcattact
gatgttctgctggtggctgcacccatgtacctgggccctggcaacaaggaggcaggcaga
gtctacatctactccctcagtggggaggaggtgtttatgtctaacggtactctgatggca
gaggataggttccaggatgctaggtttggctacgccctggcctccgccccagacctcaac
catgacgggtacactgacctgctggtgggggcacccctagaggacggacacaatggggcc
atatacgtctaccacggccagggcatacacatcatccacaactacaaacagcgtatcgca
gggtcgtccctgtccccctctctgcagtattttgggcgcagtgtgagtgccagattagac
ctggatggcgatgggctgttagatctggctgtgggggcccaggggagtgctgtactactc
agttctcgtagtatagtccagatcaacatgagtctgtccttccagccccactccatcaac
gtcatccagaagacgtgtcagagaggagggagggagtctgcctgtctcaacgctacagcc
tgcttcctggctctgtcccgttcccctggaactcacagcagcagcttcgagctgtcggtg
gtggccatgttggatgagagaaagttgacagcgagggcattgtttgacgacagcaaccag
agacagacacagctgggggtcagagttcacacaggacagaacgtctgccacaacctgccc
ttccatgtgtttgacacagcagactacatccgtccaatcagcttctccctgcgctttaag
atcaacgacacagagagcggcccagtgctggacgaaggctggcccaccaccttcaagaga
tggattgcgttcttcaaagactgtggtgaggatgatgtgtgtgtcactgatctggtgctg
caggctcatatggacatctctgggacaagacagcagccctatgtgatccgtagccctcgc
agacgtctggctgtagaagtccagctgcagaacagactggagaacgcctacaacaccagc
ctgacactgcactactcacgcaacctccacttctctagtctcagtatacgggaggatacc
cagttgaaaattgagtgtacatctctcagttccaacagtcattcctgtaatgtcagctat
cctgtgttccgctcccactccaaggtgaacttcatgttagagtttgagttcagctgtacg
tctctgctcagtaaagtccagatgaaactcacagttgccagtgacagtgtggagagagag
gctacgttgggagacaacagtgttcagctccagactgtggttcagtacgaacctgaactc
ttcatcaccagtgactccaatctgaaccgttatgaggtccacccaaccagaaccatatca
gaggcaataggaccagagttctacacacacttcaggctgcagaacctgggctgttacagt
gtgagtaacctggagttgaggctgagcctgccctctgtagcagctggagaccgagtcttc
atggctgttactgaggtcttctcttacaacgtgacaggggtgaactgcagtgtagacagt
gacgtgtcccagctgaaggacagacagagagatgtacgaccactacatcctgaagacatg
caacagactgacctactgaactgcagcagatcgtggtgtgtggaggtggtgtgtgaggta
cagcagctgcatcgaggacagaccgctctcatacgagtcagccgcagggtccacgacaac
ttcttcagacaggctaagtttaaggtggtgagaatagtgagtgcctatcgtctggctgct
caggaatctaacctggtcactctggggagtggcgccatctggagggagacggtgttggag
gtactaaaggggcgggccatccctatttctctctggattctgataggtagcatcattgga
gggcttctgctattggccctcattatcttcgcaatgtggaagctggggttcttcactcgt
aaacaggtaaaggacgaggacctcgaggactga
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