Oncorhynchus masou masou (cherry salmon): 135521838
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Entry
135521838 CDS
T10723
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135521838
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
135521838
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GFIT
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NCBI-GeneID:
135521838
NCBI-ProteinID:
XP_064803674
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Position
30:4400489..4412672
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AA seq
955 aa
AA seq
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MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVDNRKVIETQMERFKVVERETKTKAYSKEGLGLALKVDPAQRE
KEETGNWLTNTIDTLNMQVDQFESEVESLFIQTRKKKGEKEKQDRIEELKRFIERHRYHI
RMLETILRMLDNDSVQVDSIQKIKDDVEYYMESSQDPDFEENEFIYDDLDLEDIRESPMD
SQELDDESWDDHDDDAHAISSAALVATSPTGLGNIEDEMFLHSSSTPTSTTSSSPIPPSP
ATCTAENSEDDKKRGRSTDRDVSQSPAKNGASSLLSFSSSANSGSSSSSSLVSMAAVVGG
NPGVPTSNSLIGSFSSAVQQHQPQPPQQPVLQPLQQPQQPQTKPCTPSPPSHPLLSTAPS
LPTPTTPISASQNSLPQVSPGHILNSSLGLGLGLAKVGMTGTSSANSMSGLGLTGMSASL
NTMLSGSTHAPYAQAASLGGLGLSTTTQSSVSVESSSIPTSCSSGVTTNGAGTGLGLLGS
SPAHGSLTGGILGLVPGQSVIPGPPLIPLSPVGAVPGGAVGMMGGNGGSMGPIGGVVGSN
AAPARPPSGLKQNGSTSYSAVVAESTAESAFSTPSQSQSSQPSSLTSSASQHMDNGPSLI
SSITLPPSSPSPSFSDSIPGGGSLLNGPHSYTQASEGLKLPTDLRQILMETRMSAQAPEP
PGAMATATNTRKRKQCQAPEPLSSLKAMAERAALGSGLDGEIPNLHLTDRDIFSGSSAAP
GTPAAPQPSLSEVSIPPSLGVCPLGPTPLSKDQVYQQTMQESAWTHMPHPSDSERIRQYL
MRNPCPTLPFHHQMPPHHSDSIEFYQRLSTETLFFIFYYLEGTKAQYLSAKALKKQSWRF
HTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagagaaaactccaaggtgaaattgacagatgtttgaaaaaggtagctgaa
ggcgtagaacagtttgaagacatttggcagaagcttcacaatgcagccaatgccaaccaa
aaggaaaaatatgaggcagaccttaaaaaagagattaaaaagctacagcgattgagggat
cagataaaaacatgggtggcatcaaatgagatcaaagacaaaaggcagctcgtggataat
cgcaaggtcatagagacgcaaatggagcggtttaaggtggtagagcgggagacaaagacg
aaggcctactctaaagaaggcctggggctcgccctgaaagtggacccagctcagagggag
aaagaagagacgggaaactggctaacgaatacgatagacactctaaatatgcaggtggac
cagtttgagagtgaggtggaatccctcttcattcaaaccaggaagaagaaaggagagaaa
gagaagcaggatcgcattgaggagctaaagaggtttatagaaaggcataggtaccacatt
cgcatgctggagaccatcctgcgcatgctagacaacgactcggtgcaggtggactccata
cagaagatcaaggacgacgtggagtactacatggagtcgtcacaggacccagactttgag
gagaacgagttcatttacgacgatctggatctggaggacatccgtgagtcgcccatggac
agccaggagctcgatgacgagtcctgggatgatcatgatgatgatgctcatgctatcagc
tctgcagcgctggtggccacctctccaacgggcttggggaacatagaggatgagatgttc
ctccactcgagcagcactcccacctccaccacctcctcttcccccatccctccctccccg
gccacctgcactgctgagaactctgaggacgataagaagagagggcggtcgacagacagg
gacgttagtcagtctcctgcgaagaacggcgcttcctccttgttgtccttttcctcgtcc
gccaattccgggtcctcttcttcctcctctcttgtctccatggccgccgttgtcggaggc
aaccctggggttcccacaagcaacagtctaataggaagcttcagcagcgccgtacaacaa
catcagcctcaacctccacagcaaccagtcctgcagccactgcaacaaccacaacaaccc
caaacaaaaccttgcacccccagcccacccagccacccccttctctccaccgccccctct
ctccccacacccaccacacccatctcagcctcccaaaactccctaccccaggtctcgcct
ggtcatatcctcaactccagcctaggccttgggttgggcctggctaaagttggcatgact
gggacaagcagtgccaactcaatgtctggtctgggcctgactgggatgtctgcctctctg
aacaccatgctctctgggtccacccatgccccttacgcacaggcagcctcgttgggaggc
ctgggtctgagtaccactacccaatccagtgtctcagtggagagctcctccatccccacc
tcttgctccagtggagtgaccaccaacggggctgggacaggcctgggcctgctggggtcc
agcccagcacacggctccctgactggggggatcctgggcctggtgcctgggcagagtgtg
atccctgggccccctctgatccctctcagcccggtcggtgctgtccctgggggggcagtg
gggatgatgggaggaaacggaggaagcatggggccaatcggaggagtagttgggtcgaac
gcagcccctgccagaccgcccagtggactgaagcagaacggaagcacaagttacagtgct
gtggtggcagagagcacagcagagtccgccttcagcacacccagccaatcacagagcagc
cagccttcctcgctgacctcctcagccagtcagcatatggacaacggtcccagcctcatc
agctccatcaccttgccccccagctctccgtccccctcgttttctgacagtatccccggt
ggagggagtctcctcaacggaccccactcctacacacaggcctctgagggcctcaagctt
cctacagacctccgtcagatactgatggagaccagaatgtcagcgcaggccccagagcca
ccaggggccatggctacagccactaacacacgaaagagaaagcagtgtcaggccccggag
cctctgagttctctgaaggcgatggctgagagagcagcattaggatcaggtctagatgga
gagatccccaacctgcacctcacagacagagacatcttctctggttcgtcggctgccccc
ggaacgcccgcggccccccagccctccctgtcggaggtgagcatccccccttccctgggg
gtgtgtcccctgggtcccactccgctctccaaggaccaggtgtaccagcagaccatgcag
gagtctgcttggacacacatgccgcacccctcagactccgagaggatcaggcaatacctg
atgaggaacccatgccccaccctgccattccatcatcagatgcccccccaccactcagac
tctatagagttctaccagagactgtccacagagacgctcttcttcatcttctactacctg
gagggcactaaagctcagtacctgtcagccaaggctctgaagaagcagtcgtggaggttc
cacaccaagtacatgatgtggttccaaaggcacgaagaacccaagaccatcactgatgag
tttgaacagggcacttacatctactttgactatgagaagtggggtcagaggaagaaggag
gggttcacctttgagtacaggtacctggaagaccgagacctgcagtga
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