Oncorhynchus masou masou (cherry salmon): 135521841
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Entry
135521841 CDS
T10723
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135521841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omm03041
]
135521841
Spliceosome [BR:
omm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
135521841
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
135521841
NCBI-ProteinID:
XP_064803684
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Position
30:complement(4415095..4419646)
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AA seq
532 aa
AA seq
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MSLADELLADLEEAGDEGEDGLYPGEEGESDGEAGEGQVEGGLEDIPEEMEVDYSGAESV
SSIAKLRNSKQFSEIMDKIAIYVEKQRKNSEVSGPVEADPEYKLIVAANNLTVEIENELN
IIHKFVRDKYSKRFPELESLVPNSLDYVRTVKELGNNLDKCKNNENLQQILTNATIMVVS
VTASTTQGTMLGEDELKRLEEACDMALELNQSKHRIYEYVESRMSFIAPNLSVIVGASTA
AKIMGIAGGLTNLSKMPACNLMLLGTQKRTLSGFSSTAVLPHTGYIYHCDVVQTLPPDLR
RKAARLVSAKCTLASRVDSFHESADGKVGYDLKEEIEKKFDKWQEPPPVKTVKPLPAPLD
GQRKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRVR
QAQVNEATKARISKSLQRKLQKQNMTYGGRSTVGGRSTVGSRSTVGGRSTVGGRSSVRDN
SSGTSSSVAFTPLQGLEIVNPHAAEKKVAEANQKYFSNMAEFLKVKKEGEGK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttggccgatgagctcctggctgatctggaggaggcgggggatgagggggaggat
gggctgtacccgggggaagagggggagagtgatggggaggcaggggagggacaggtagag
ggaggtttggaggacattccagaggagatggaggtggactacagcggagctgagagtgtc
tcgtccatcgctaaactgcgcaacagcaaacagttctcagagatcatggacaaaattgca
atctatgtcgagaagcagcgcaagaactctgaagtctccggtccagtggaggcagaccca
gaatacaagctcatcgttgctgccaataacctcacagtagaaattgagaacgaactgaac
atcattcacaagtttgtacgtgacaagtattctaagaggttccctgagttggagtccctg
gtgcccaactctctggattacgtccgcactgtcaaggagctggggaacaacctggacaag
tgtaagaacaacgagaatctgcagcagatcctgaccaacgccaccatcatggtggtcagc
gtcacagcctccaccacacaggggacgatgctgggtgaggatgaactgaagaggttggag
gaggcctgtgacatggcgctagagctgaaccaatcaaaacacaggatctatgaatatgtg
gagtccaggatgtcattcattgctcctaatctgtcagtcatcgttggagcctcgaccgca
gccaagatcatgggtattgctgggggcctgaccaacctgtctaagatgccagcctgtaac
ctgatgctactgggaacccagaagaggaccctgtcagggttcagcagcaccgctgtgctc
ccacacaccggctacatctaccactgtgatgtggtccagactctacccccggacctgagg
agaaaggcagcacgcctggtttcagcgaagtgcaccctggcatctcgagtggacagcttc
cacgagagtgcagacggcaaggtgggctatgacctgaaagaggagatcgagaagaagttt
gataaatggcaggagcctccaccagtgaagactgtcaaacccctgccagcaccgttggac
ggacagaggaagaagagaggagggcggaggtatcgtaagatgaaggagcgtctgggtctg
acagagatcaggaaacacgccaacaggatgaccttcgcagagattgaggatgatgcgtac
caggaggacctgggtttcagtctgggccagctggggaagtcgggcagtggacgcgtcaga
caggctcaggtcaacgaggccaccaaggccaggatatccaagtccctacagaggaagctg
cagaagcagaacatgacgtacggcggcaggtccacagttggcggcaggtccacagttggc
agcaggtccacagtcggcgggaggtccacagttggcgggaggtcctcggtcagagacaac
tcctcaggaaccagttccagcgtagccttcactccactacagggactggagattgtgaac
ccgcatgcagcagagaagaaggtggctgaggccaaccagaaatacttctccaacatggca
gagttcctcaaggtcaagaaggagggagagggaaagtga
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