KEGG   Oncorhynchus masou masou (cherry salmon): 135521877
Entry
135521877         CDS       T10723                                 
Name
(RefSeq) ubiquitin-like protein ATG12
  KO
K08336  ubiquitin-like protein ATG12
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Pathway
omm04068  FoxO signaling pathway
omm04136  Autophagy - other
omm04140  Autophagy - animal
omm04621  NOD-like receptor signaling pathway
omm04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:omm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    135521877
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    135521877
   04136 Autophagy - other
    135521877
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    135521877
   04622 RIG-I-like receptor signaling pathway
    135521877
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omm04131]
    135521877
   04121 Ubiquitin system [BR:omm04121]
    135521877
   03029 Mitochondrial biogenesis [BR:omm03029]
    135521877
Membrane trafficking [BR:omm04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    135521877
Ubiquitin system [BR:omm04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   135521877
Mitochondrial biogenesis [BR:omm03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    135521877
SSDB
Motif
Pfam: APG12 ATG8
Other DBs
NCBI-GeneID: 135521877
NCBI-ProteinID: XP_064803729
LinkDB
Position
30:complement(5560107..5563412)
AA seq 120 aa
MSDNAESPTETQKDEPSTPQQPTEDLGTADEKKKIDVLLKAVGDTPIMKTKKWSVEKGRT
VQSLSQFISRFLKMEANEQLFIYVNQSFSPSPDQEVGVLFECFGSDGKLVLHYCKSQAWG
NT seq 363 nt   +upstreamnt  +downstreamnt
atgtctgacaacgcagagtctcctacagaaacgcaaaaagatgagccttcaaccccacaa
cagcctacggaagacttggggacggcagacgagaagaaaaaaattgatgtgttgttgaag
gcagtaggagacacccccatcatgaagacaaagaaatggtcagtagagaaagggaggaca
gtgcaatcactctctcaattcatctctcgattcctcaagatggaggccaatgaacagctg
ttcatttacgtcaaccagtcattctctccctcgcctgatcaggaagtaggagtcctgttt
gaatgttttggcagcgatgggaagcttgttctacattactgtaaatctcaagcctggggt
taa

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