Oncorhynchus masou masou (cherry salmon): 135521931
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Entry
135521931 CDS
T10723
Name
(RefSeq) protein jagged-1b-like isoform X1
KO
K06052
jagged-1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04330
Notch signaling pathway
omm04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
135521931
04371 Apelin signaling pathway
135521931
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
omm04090
]
135521931
CD molecules [BR:
omm04090
]
Proteins
135521931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
JAG1
DSL
EGF_DL_JAG
EGF_2
JAG1-like_EGF2
EGF_Teneurin
EGF_CA
EGF_3
CD34_antigen
Motif
Other DBs
NCBI-GeneID:
135521931
NCBI-ProteinID:
XP_064803825
LinkDB
All DBs
Position
4:4646023..4679760
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AA seq
1247 aa
AA seq
DB search
MILRPSSSCAAFSIHVFLQCMWIKVAVASGHFELQIVSMQNVNGELQTGVCCDGSRNAVD
RRCTRDECDTYFKVCLKEYQLKVSSAGPCSFGTASTPVVGGNTFSLRNTRSDKSRIVLPF
SFAWPRSYTLIVEALDFNNDSSTGSVGGERIEKAVQSGMINPSRQWQSLKHNGPVGQFEY
QIRVSCDEHYYGFGCNKFCRPRNDFFGHYNCDHNGNKTCLEGWSGPECSTAICRQGCSTE
HGSCKLPGDCKCLYGWQGEYCDKCIPHPGCVHGSCVEPWQCLCDTNFGGQLCDKDLNTCG
TFQPCLNMGTCSNTGPDKYHCACPDGYSGVNCEKAEHACLSEPCFNGGSCLETSQGFECQ
CAPGWSGPSCSINVDECFPNPCGHGGTCQDQVNGFKCTCPFQWSGKTCLIDANECEGDPC
LNANSCRNLIGGYFCECLPGWMGQNCDTNINDCQDQCQNGGTCKDRVNGYRCVCSPGFGG
EHCEKDVDECASGPCLNGGRCKDDVNGFQCLCLPGFSGNFCQLDIDYCMPNPCQNGAQCF
NLATDYFCKCPEDYEGKNCSHLKDHCRTTPCKVIDSCTVAVASNSTPGGMRLISSNVCGP
HGRCRSQAGGQFSCECQEGFTGTYCHENINDCESGPCQNGGTCIDKVSLYQCICAEGWEG
PNCDNNIDDCNTNPCRNRGTCRDLVNDFYCECKNGWKGKTCHSRESQCDEATCNNGGTCY
DEGDTFKCMCAAGWEGSTCNIAKNSSCLPSPCENGGTCVVSGDSFTCVCKEGWEGLTCNQ
NSNDCNPHPCYNSGTCVDGDNWYRCECAAGFAGPDCRININECQSSPCAFGSTCVDEING
YRCLCPPGMAGLRCQEVAGRPCVVSGLVAVDGTKWDDDCNTCQCHNGKVTCTMIWCGPKS
CRVHSKSHSGGECPVGQMCVPVRDECCFVKPCPSQGECWSASHSPKPHAKCHPESHCANV
TFTFNKDTMPQGLTVENICSELRSLYVVRNLSSEYSVSMTCEPSATANNEIHVAISTEDP
RRGKAPIKEITDKFIDLVSKRNGNSTITTAVIEVRVQRRQSHNPNADYLVPLLVSVVIVI
WLLAVVSAFIWCLKRRLKPSTHTGVNTQSSSPATTAEDTNNAVNNVREQLNQIKNPIDKH
GLTNGLPPVKEHPNHHHYHYEDKNSLINAKIRTNNSDVGSHHSDDEESEKRFQKARFPRH
TPYTLVDREERSPQPLRTAGKHSNWINKQDNRDLESAQSLNRMEFIV
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgattttgagaccgagttcaagctgtgctgctttttctattcatgtcttcttgcaatgc
atgtggattaaggtggctgtggcatcaggacacttcgaattgcaaattgtgtcgatgcag
aacgtgaatggcgaactgcaaactggtgtgtgctgcgatggatctcggaatgccgtagat
cgcagatgcacgagggacgagtgtgatacctattttaaagtgtgtctaaaggagtaccag
ttgaaggtctcttcggcgggcccatgcagtttcgggacggcttcaacacccgtggtcgga
gggaatactttttctttgcggaacacgaggagtgacaagtcaaggattgtgttacctttc
agcttcgcttggccgaggtcctatacgttgatcgtggaggccttggacttcaacaacgac
tcttctacgggcagcgtgggaggcgagaggatcgagaaggctgttcagtcgggcatgatc
aaccccagccgccagtggcagagcctgaagcataacgggccggttggccagttcgagtac
cagattcgggtcagctgcgacgagcactactatggtttcggctgcaacaagttctgccgt
ccgcgcaacgacttttttggccactacaactgcgatcacaacggcaacaagacctgcctc
gaggggtggtctggaccagaatgcagcactgctatttgcaggcaaggctgcagcactgaa
cacggttcctgtaaattgcccggagattgcaagtgtctgtacggctggcagggcgagtac
tgtgataagtgcatccctcacccgggctgtgtgcatggaagctgcgtggaaccgtggcag
tgcctctgtgacacaaactttggcggccagctctgcgataaagacctgaacacatgtggt
acattccagccctgtctgaacatggggacctgcagcaacactggacctgacaagtaccac
tgtgcctgtcctgacggctactctggtgtcaactgcgagaaagcagagcatgcctgtctg
tcggagccctgttttaacggagggagctgtttggagaccagtcagggcttcgagtgccag
tgtgcccccggctggagtggcccctcctgcagcatcaatgtggacgagtgtttccccaac
ccctgtggccatgggggcacctgccaggaccaggtcaacggcttcaagtgcacctgtccc
ttccagtggagcggcaagacctgcctcatcgacgccaatgagtgcgaaggcgacccctgc
ctgaatgccaactcctgccggaacctaattggagggtacttctgcgagtgcctccctggt
tggatgggccagaactgcgacaccaatattaatgactgccaggaccagtgtcaaaatggg
ggaacctgcaaggacagggtgaacgggtaccgctgtgtttgttcgccgggcttcggcggt
gagcactgcgagaaggatgtagatgagtgtgccagtggcccgtgcctgaacggcggccgt
tgcaaggacgacgtcaacggcttccagtgcctgtgcctgcccggtttctctggcaacttc
tgtcagctggatatcgactactgcatgccgaacccatgtcaaaacggggcccagtgtttc
aacctggctaccgactacttctgcaaatgtcccgaagactatgagggcaagaactgttcc
catttgaaggaccactgtcgtaccacaccctgcaaagtgattgacagctgcacggttgcc
gtggcatccaacagcacccctgggggcatgcgtctgatttcgtccaatgtgtgcgggccc
cacgggcgctgccggagccaggctgggggccagttcagctgcgagtgccaggagggcttc
actgggacatactgccatgagaatataaatgactgtgaaagcggcccgtgccagaacggg
ggaacgtgtattgacaaagtcagcctgtaccagtgcatctgtgccgagggttgggaggga
cccaactgcgacaataacattgacgactgcaacaccaacccctgtcgtaaccgtggcacg
tgccgggacctggtgaatgacttctactgtgagtgtaagaacggatggaagggcaagaca
tgtcactcaagggagagccagtgtgacgaggcgacatgcaacaatggcggaacgtgctac
gatgaaggggacaccttcaaatgcatgtgtgctgccggatgggagggttccacctgtaat
atagctaagaacagcagctgtctgcctagcccttgtgagaacggaggcacctgtgtggtc
agtggagactctttcacctgtgtctgcaaagagggctgggagggcctgacctgcaaccaa
aattccaacgactgcaatccccacccttgctataacagtggaacctgtgtggacggagat
aactggtaccggtgtgagtgtgccgcaggattcgcaggaccagactgcaggattaacatc
aacgagtgccagtcgtcgccttgtgcgttcggctccacctgcgtagacgagatcaatggc
taccgctgcctgtgtccaccagggatggccggcctcagatgccaagaagttgctgggaga
ccctgtgttgtcagcggtctggtggccgtggacgggaccaaatgggacgacgattgcaac
acctgccagtgccacaatgggaaggtcacctgtacaatgatctggtgcggtcccaaatcc
tgccgggtccacagtaaaagccacagcggtggcgagtgcccggtcggtcagatgtgtgtg
cccgtccgggacgagtgctgttttgtcaagccatgccccagccagggcgagtgctggtcg
gcctcccacagtcccaagccccatgcaaagtgccaccccgagagccactgtgccaacgtc
accttcaccttcaacaaggacaccatgccacagggcttgactgttgagaacatctgcagc
gagctaaggagtctgtatgtggtgaggaacctctcgtcagagtactcggtgtccatgaca
tgcgagccatcggccacagccaacaacgagatccatgtagccatctcgacagaggacccc
agaagaggcaaggcccctatcaaggaaatcacggacaagttcatagacctggtcagcaag
cgaaacggcaacagcactatcaccacagccgtcatcgaggtccgcgtccagaggaggcag
agccacaaccccaatgcagactacctggtccccctgctggtgtccgtagtcatcgtcatc
tggctcctggctgtggtctctgcttttatctggtgcctcaagcggcgcctaaagcccagc
acccacacgggtgtcaacacccagtcgtcgtccccagcgacgacagccgaagacacaaac
aatgcagtcaacaacgtgcgcgagcagctcaaccagatcaagaaccccatcgataaacac
ggtctgaccaatggcctacccccagttaaagaacaccccaaccaccaccactatcactat
gaggacaagaactctcttatcaacgccaaaattagaacaaacaactccgacgtgggtagc
caccattcggatgacgaggagtctgagaagaggtttcagaaggctaggttcccaaggcat
acgccatatacgttagtggaccgggaggagcggagcccacagccgctccgcacggccggc
aaacactccaactggattaacaaacaggacaacagagacttggagtcggcgcagagctta
aaccgaatggaattcattgtatag
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