Oncorhynchus masou masou (cherry salmon): 135521950
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Entry
135521950 CDS
T10723
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04517
IgSF CAM signaling
omm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
135521950
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135521950
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omm04812
]
135521950
Cytoskeleton proteins [BR:
omm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
135521950
Intermediate filaments
Intermediate filament-binding proteins
135521950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
135521950
NCBI-ProteinID:
XP_064803849
LinkDB
All DBs
Position
4:complement(4698591..4809117)
Genome browser
AA seq
2350 aa
AA seq
DB search
MTTVAAEYEHMEITQQYGSSDTVNNRWDEEWDNENSSARLFERSRIKALADEREAVQKKT
FTKWVNSHLSRVSCRITDLYRDLSDGRMLIKLLEVLSGERLPKPTRGRMRIHCLENVDKA
LQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETDGDNKEKRSAKDA
LLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHHNLQNAF
NLAEQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAI
ETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLNGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKTWERLEKAEHERELSLRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVDAATKKHEAIETDITAYEERV
QAVVSVAKELEAEKYHDIKRIAARKDNVIRLWEYLLELLKSRRQRLEMNLGLQRVFQEML
YIMDWMDEMKMMLLSQDYGKHLLGVEDLLQKHALVEADIGIQADRVKAVNNNAQKFAIDG
DVYKPCDPQVIRDRVAHMEFCYQELTQLAAERRARLEESHRLWKFFWEMAEEEGWIREKE
QILSSDESGKDLTGTVRLLSQHRTLEDEMSGRAGHLLHTITEGQTMADGGHFGAAKIRER
ITNLRAQWAALEELAAVRKAHLEEAYALHQFQADADDADAWTLDVLRIVSSGEVGHDEFS
TQALVRKHKDAAAEVASYRPVIDALYEQAGALPEAQVQSEQVKGRLAGIEERYKEVAELT
RFRKQALQDALALYKMFSEADACEMWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEM
NNQASRVAVVNQIARQLMHNGHPSEKNIKAQQDKLNNRWSQFRELADQKKESLISALGVQ
NYHLDCKETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEDKLGDLRGE
AERLAGEHPDQAKAIKGRLAEITAVWEEMKATLRNREESLGEASKLQQFLRELDDFQSWL
SRTQTAVASEETPNTLAEAEKLLAQHEGIKNEIRNYEEDYQKMRDMGEMVTQGQTDAQYM
FLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTTQAEAFLNNQEYMLAHTEMA
TTLEGAEVAIKQQEDFMTTMDANEEKINGVVEAGRRLATDGNINADRIQERVASIDDSHK
KNRKAALELLMRLKDNRDLQKFLQDSQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIEKDGMQLVLEKPETESVVKEKLSALQKMWEVLESTTQTKAQCLFD
ANKTELFTQSCADLNKWLGGLEGQIQSDDYGKDLTSVNILLKKQQILENQVEVRQREVVE
LQSQALVLGQEGNVTEEVDCQRQMVEHKFKELLDPLRKRKNFLVASREIHQFNRDVEDEI
LWVEERMRIATSTEHGHNLQTVQLLIKKNQTLQKEIQGHQPRFDDIFERSESLLMEDSLA
VEAIRQHLADLQQLWGLMIEETEKRHARLEQSHNAQKYYFDAAEAEAWMSEQELYMMSEE
KAKDEQSSVAMLKKHQIVEQSVEDYAETVHQLSKTSRGLTAAGHTESERIGMRQSQVDKL
YAGMKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFSRDTGHIGQERVDAVNRLSDKLINAGHADAATVAEWKDGLNEAWADLLELIDTRTQ
ILSASYELHKFYHDAKEILGRILDKHKKLPEEVGRDQNTVETLQRMHTTFEHDIQALGTQ
VRQLQEDAVRLQSAYAGDKADDIQRRESEVLEAWNTLLESCDVRRGHLLDTGDKFHFLSM
VRDLMLWMEDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLA
RKHYASEEIKYKLLQLMDKRKDMIDKWEDRREWLRLILEVHQFGRDAGVAEAWLLGQEPY
LFGLELGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERMRK
PPSPEPLPAQDSPRQSGVENGLQNGLPSDQDSPQNGLDRVEIMNGVAEQNSKDPSPIPSP
TANRRGKGSLSSTLLTQNHDSPVAQVEGFLHRKHEWEGHNKKASSRSWHNVYCVINNQEM
GFYKDNKGAGQGIPYHNAIPISLIGAVCDVAMNYKKKKHVFKLRVADGNEYLFQAKEEEE
MSTWIQAILNAGTPDKVSITPSNQSTPASSRAQTLPATVTLTTESSPGKREKDKEKDKEK
RFSLFGKKKL
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgtagccgcggaatatgaacacatggagatcacgcagcagtacggtagcagc
gacacggtcaacaaccgctgggatgaggagtgggataatgagaacagctcggctcgcctg
ttcgagcgctcgcgcatcaaggccctggcagatgagcgtgaagcggtgcagaagaagacc
ttcaccaaatgggtgaactctcacctctcccgggtgtcctgccgcatcacggacctgtac
agggacctgagtgatggacgcatgctcatcaaactgctggaggtgctgtctggggagaga
ctgcccaagcccaccaggggacggatgcgtatccactgcctggagaatgtggacaaggcc
ctgcagttcctcaaggagcagagagtccacctggaaaacatgggctcacatgacatcgtt
gacggcaaccaccgcctcaccctgggcctcatctggaccatcattctcaggttccagatc
caggacattagcgttgagactgatggagacaacaaggagaagagatctgccaaggatgcc
ctgctcctctggtgccagatgaagacggctggctatccaaacgtgaacattcacaacttc
agcaccagttggcgagacggcatggcattcaatgccctcatccataagcacaggccagac
ctgattgactttgacaagctgaaaaagtctaatgcccaccacaacctgcagaatgccttc
aatttggctgagcagcatctggggctaaccaagctcctggacccagaggatatcagtgtg
gaccacccagatgagaagtctgtcatcacatacgtggtgacatactaccactacttctcc
aaaatgaaggccctgaaagtcgaggggaaacgtattgggaaggtactggacaatgccatt
gagacagagaagatgattgagaagtacgagtctctggcctcagacctgctggagtggatc
gagcagaccatcatcatcctcaacaatcgcaagtttgccaactctttaaatggggtgcag
cagcagcttcaagccttcaacacatatcgcacggttgagaaaccccctaagtttactgag
aagggcaacctggaggtgcttctgtttaccatccagagcaagatgagggctaacaatcag
aaagtctacatgcccagggagggcaaactcatctccgacattaacaagacctgggagaga
ctggagaaggcagagcatgagcgggagctgtctctgaggacagagctgattcgacaggag
aaactggagcagctggctcgccgctttgaccgcaaggctgccatgagggagacctggttg
agtgagaaccagcgcctcgtctcacaggacaactttggcttcgaccttccagcagtggac
gcggccaccaagaagcatgaggccatcgagactgatattacagcttacgaggagcgtgtg
caggccgtggtgtccgtcgctaaggagctggaggcagagaaataccacgacatcaaacga
atcgcagcacgcaaggacaatgtgatccggctgtgggagtacctgctggagcttctgaag
tcgaggcgccagcgcctggagatgaacttgggtctgcagagggtcttccaggagatgctt
tacatcatggactggatggacgagatgaagatgatgctactgtcccaggactatgggaag
catctgctcggagtggaggatctcttgcagaaacatgccctggtggaggctgacatcggc
atccaggccgaccgagtcaaagctgtcaacaataatgctcagaagtttgccatcgatggc
gatgtttacaagccctgtgaccctcaggtaatacgtgaccgcgtggcacacatggagttc
tgctatcaggaactgacccagctggctgccgagcgacgggcccgcctggaggagtcccac
cgcctctggaagttcttctgggagatggccgaggaggagggctggatccgtgagaaggag
cagatcctgtcgtcggacgagagcggcaaggacctgacgggcactgtgcgcctgctgagc
cagcaccgcaccctggaggacgagatgagtggccgtgcaggtcacctgctgcacaccatt
actgagggccagaccatggccgacggcggccacttcggcgctgccaagatccgtgaacgc
atcaccaacctgcgggcacagtgggcagcgttggaggagctggcggccgtgaggaaggcc
catctggaggaagcatatgccctgcaccagttccaggcggatgcagatgacgccgacgcc
tggaccctggatgtcctgcgtatcgtgtccagtggcgaggtgggccatgacgagttctcc
acacaggccctggtgcgcaaacacaaggacgccgccgccgaggtggccagctatcggccg
gtgatagatgcgctctatgagcaggcgggcgccttgcctgaggcgcaggtccaatcggaa
caggtcaagggccgtttggcaggcatagaggagcgttacaaggaggtggccgagctgacc
cggtttagaaagcaggcactgcaggacgccctggccctctacaagatgttcagcgaggcg
gacgcctgcgagatgtggatcgacgagaaggagcagtggctcaacagtatggagatccca
gagaagctggaagacctagaggtcatacagcacaggttcgagagcctggagcctgagatg
aacaaccaggcatcacgcgtcgctgttgtgaaccagatcgccaggcagctgatgcacaat
ggacaccccagtgagaagaacatcaaagcccagcaagataagctcaacaacagatggagc
cagttccgggaactggcagaccagaagaaggagtctctaatctcggcgctgggtgtgcag
aactaccacctggactgcaaagaaaccaagtcatggatccgcgagaagacgaaggtcatc
gagtccacccaggagctgggcaacgacctgacgggtgtcatggccctgcagcgtaaactc
actggcatggagcgtgacctggctgccatcgaggacaagctgggcgacctgcgtggcgag
gcagagcggctggccggcgagcacccggaccaggccaaggccatcaagggccgcctggcc
gagatcactgccgtgtgggaggagatgaaggccacactgcgtaatcgcgaggagtccctt
ggtgaggccagcaagctgcagcagttcctgcgcgagctggatgacttccagtcgtggctg
tcacgcacacagacagccgtcgcctcggaggagacgcccaacacgctggctgaggcagag
aagctgctagcacagcacgagggcatcaagaatgagatccgcaactacgaggaggactac
cagaagatgcgcgacatgggcgagatggtgacccagggccagaccgatgcccagtacatg
ttcctgcggcagcggctacaggccctggacacgggctggaatgagctgcacaagatgtgg
gaaaaccggcagaacctgctgtcccagtcccacgcctaccaactgtttctcagggacacc
acgcaggccgaggccttccttaacaaccaggaatacatgctggcccatacagagatggcc
actacgcttgagggggccgaagtagccatcaagcagcaggaggacttcatgaccacaatg
gatgccaacgaagagaagataaacggtgtggtggaggctggcaggcggctggcgactgat
ggcaacatcaacgccgaccgcatccaggagagagtggcgtctattgacgacagccataag
aagaaccgcaaggctgctctggagctactgatgaggctgaaggataaccgggaccttcag
aagttcctacaggattcccaggagctgtccctgtggatcaatgagaagatgctcacggcc
caggacatgtcgtacgacgaggccaggaacctccacagcaaatggctcaagcatcaggcc
ttcatggccgagcttcagtccaacaaggagtggctggacaaaattgagaaggatgggatg
cagctggtgttggagaagcctgagacagagtcggtggtcaaggagaagctctcagccctc
cagaagatgtgggaagtgttggagtctaccacccagaccaaagcccagtgcctgtttgac
gccaacaagaccgagctgttcacacagagctgtgctgacttgaacaagtggctgggtggc
ctggagggacagattcaatctgatgactatggcaaagacctgaccagtgtcaatatcctg
ctcaaaaagcagcagatattggagaaccaggtggaggtccgtcagagggaggtggtggag
ctgcagagccaggcactggtcctcggccaggaagggaatgtcacagaggaggtggattgc
cagagacagatggtggagcacaagttcaaagagctgctcgacccgctgaggaagagaaag
aacttcctggtggcctcccgtgagatccaccagttcaaccgcgatgtggaggatgagata
ctttgggtcgaagagaggatgcgaattgcaacctccacagagcatggtcacaacctacag
accgttcaactgcttatcaagaaaaatcagaccttgcagaaggagatccagggacaccag
ccccgcttcgacgacattttcgagcggagcgagagcctgctgatggaggacagccttgcc
gtggaggccatccgccagcacctggccgacctgcaacagctgtggggtctgatgattgag
gagacagagaagcgtcatgcccgactggagcagtcccacaatgcccagaagtactacttt
gatgccgccgaggcagaggcctggatgagcgagcaggagttgtacatgatgtctgaggag
aaagccaaggatgagcagagctctgtagccatgctgaagaagcaccagattgtggaacaa
tcggtggaggactacgctgagacagtccatcagctctccaagaccagcagaggcctgaca
gctgcaggacatacagagagtgaaaggataggcatgcgtcagtctcaggtggacaagctc
tatgccggcatgaaggacctgtctgaggagaggcggggcaaactggatgagaggttccgc
ctgttccagctcaaccgcgaggttgacgacttggagcagtggattgccgagcgggaggtg
gtggccggatctcatgagctgggacaggactacgagcatgtcactatgctccaggagcgc
ttccgggagttttcccgtgacacaggccacatcggccaggagcgtgtggatgccgtcaac
cgcttgtccgacaagctgattaatgcgggtcacgcagatgccgccacggtggctgagtgg
aaggacggtctcaacgaggcctgggctgacctgctggagctcatcgacacgcgcacgcag
atcctgtccgcctcttacgagctacacaagttctaccacgacgccaaggagatcctgggc
cgcatcctggacaaacacaagaagcttcccgaggaggtgggacgtgaccagaacacggtg
gagacactgcagcggatgcacaccaccttcgagcacgacatccaggccctgggaacacag
gtgaggcagctgcaggaggatgccgtccgcctccagtcagcctacgccggtgacaaggca
gacgacatccagcggagggagagtgaggtgctggaggcctggaataccctgctggagtcc
tgcgatgtccgcagaggccacctcctggacacgggtgacaaatttcacttcctcagcatg
gtgcgcgatctcatgctgtggatggaggatgtcatccgtctcatcgaagctcaggagaat
ccaagggacgtgtcctctgtggagttgttgatgaacaaccaccagggtatcaaggctgag
atcgatgcccgtaatgacagcttcaccgcctgcattgagttgggcaagtctctgctagcc
agaaagcactatgcatcagaggagatcaaatataaattactacagctgatggacaagagg
aaagacatgattgacaagtgggaggaccgacgggagtggttaagactgattttggaagtt
caccagtttgggagggatgcaggggtggcagaggcgtggctgctgggacaggaaccatac
ctgtttggcctggagttggggcagagcgtggacgaagtggagaaactgatcaagaggcac
gaggcttttgagaagtcggccgctacttgggaggagcgcttctcagcactggagaggttg
actacgttggagttattggaagtgagaagacagcaagaggaagaagagagaatgcgaaaa
cccccttcaccggagcctttaccggcgcaggactcaccacggcagagtggagtagagaac
ggactgcagaacggactgccctcagaccaggattctccacagaatggcttggatagagtt
gagatcatgaatggagtggcggagcagaactcaaaggacccgagccccattccctcaccc
acagccaaccggcggggcaagggcagcctgtcctccacgttgctgacccagaaccacgat
tcgcctgtggctcaggtggagggcttcctgcatcgcaagcatgaatgggagggacacaac
aagaaggcctcaagcagatcatggcataacgtgtactgcgttatcaacaatcaggaaatg
ggcttctacaaagacaacaagggtgctggtcaaggcatcccctaccataatgcgattccg
atcagtctaattggggctgtgtgtgatgtggccatgaactacaaaaaaaagaagcatgtc
ttcaaactcagagttgctgatggaaatgagtatctcttccaagccaaagaagaggaggag
atgagcacatggatccaggccattctgaacgcggggacacctgacaaggtatcgattacg
cccagcaaccagagcactccagcgtcgagccgagcccagaccctgcccgccactgtcacc
ctcaccactgaatccagcccaggcaagcgggagaaagacaaggaaaaggacaaggagaag
cgattcagcctctttggcaagaaaaaactataa
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integrated database retrieval system
