Oncorhynchus masou masou (cherry salmon): 135522059
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Entry
135522059 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: activating signal cointegrator 1 complex subunit 3-like
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
Enzymes [BR:
omm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
135522059
DNA repair and recombination proteins [BR:
omm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
135522059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135522059
NCBI-ProteinID:
XP_064804047
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All DBs
Position
30:11462170..11624396
Genome browser
AA seq
2209 aa
AA seq
DB search
MSPPRLTGALRSFSTVSKQEDFTEEVYDLKTKRLKRQELFSREGLTWQKIVQFFTQHLEK
AEQQAAAQELKSILQAAKQIVGTEHGQDTIESAAVFLFETFHNKDHVGHEETRAIKQMFG
PFPSSAADASCAAVSRAVAPLGESQVEEFVRSQSSCRAPQRGSAFGRNITFSYDCYTLDP
QEALPGRGDPEDETPGGGLDFHSFLNNHQGRRSNGGEADGGRQSPGGAQSSGDGTILRGE
VEKYLNGGNMISSSPEELCTSLFEMLASTKSDDELQNELFELLGPEGFEMISVLLQRRSS
IVDSLLSIPADTINYPPDGSRGGEGGSKPTYGCQVTIQSGKEKEMMKMHRREEKRERKRG
ERRWDDTESSSDLYFDPKEMRAQREQALLTARRSPVLSRERVYERIRYPNVYDCYAEATK
TSAFVGGAKLMLPEGIKRENNKMYEEVEIPPSDPMSIGFEEKPIYISELDEIGQLVFKGM
QRLNRIQSIVFETAYNTNENLLICAPTGAGKTNIAMLTVLHEIRQHLQPGGVIKKDEFKI
VYVAPMKALAAEMTNYFSKRLEPLGIAVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTR
KSVGDVALSQIVKLLILDEVHLLHEDRGPVLESLVARTLRQVESTQSMIRILGLSATLPN
YLDVASFLHVNPYIGLFYFDSRFRPVPLGQSFVGIKSTNKIQQLHDMEEVCYEKVLEQIR
NGHQVMVFVHARNATVRTAMGLMEMAKNRGESSFFQPDHGPDYGQCEKSIQRSRNKQMKE
MFPDGFGIHHAGMLRADRSLMESMFSRGYLKVLCCTATLAWGVNLPAHAVIIKGTQIYDA
KRGTLVDLGILDVMQIFGRAGRPQFDKYGEGTIITAHDKLSHYLTLLTQQNPIESQFLET
MADNLNAEVSLGTVTNVEEAVRWLSYTYLYIRMRANPLAYGINHKAYQMDPGLELYRKEL
VVMAARKLDKARMIRFEERTGYFASTDLGRTASHFYIKYNTMETFNELFNSQKTEADILS
IVSKAEEFEQVKVRDEEMEELEQMLCNYCELPAAGGVENGYGKINILLQTYIGRGEVDSF
SLISDLSYVAQNAARIVRALFEIALRKRWPAMTYRLLNLCKVIDKRLWGFAHPLRQFSIL
PHNVLARLEEKKLSVDKLKDMQKDEIGHMLHHVNIGLKVKQCVHQIPSILMEATIQPITR
TVLRVRLQITPDFQWHDQCHGSVGEPWWLWVEDPINDHIYHSEYLLLQKKQVVSGEPQQV
VFTIPIFEPMPSQYYIRAVSDRWLGSEAVCIINFQHLILPERHPPHTELLDLQPLPITSL
GNLEYESLYKFTHFNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAELAMFRVFNQYPTS
KVVYIAPLKALVRERIEDWKIRIEEKLGKKVVELTGDVTPDMRAIAAADLIVTTPEKWDG
VSRSWQNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTNKTVRVVGLSTAL
ANARDLADWLGIGQVGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPVFQAIRSHS
PAKPVLIFVSSRRQTRLTALDLIAFLATEDDPKQWLHQDETQMTDIIATVRESNLKLTLA
FGIGMHHAGLHERDRKTVEELFVNCKIQILIATSTLAWGVNFPAHLVIVKGTEYYDGKTR
RYVDYPITDVLQMMGRAGRPQYDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVLSD
HLNAEIAAGTITSKQDAMDYITWTYFFRRLVMNPSYYSLDDISHETINKYLSNLVERSLR
DLECSYCMEIGEDDCTIEALTYGRISSYYYLKHQTVRMFKERLRAELPIQDILSVLTDAE
EYAELPVRHNEDQLNSELAQRLPLQVNPHSYDSAHTKTHLLLQAHFSRAQLPCSDYGTDT
KTVLDNAIRICQAMLDVAANEGWLVTALSICNLVQMIVQGRWLNDSSILTLPTIEQQHLY
LFSRWSSKGGKGGARGFHGPIEGLPELIATCEGRENTFAAIVGEELQPHQISQAWSFLSH
LPVVEVRLSVKGWWEGCGEQTERPLPAAGGKLRDDRSWLDVHADQEYVLQVSLQRINTGQ
QRRKQDTKAQAPRFPKNKDEGWFLVLGEVERRELLAVKRIGYCRHRSTISLAFYTPVKTG
KCIYTLYLMSDSYLGLDQQYDLHLNVTPACIAAQVNSEVTEAMGGLSVK
NT seq
6630 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaccccggctcaccggcgccctgcgctccttctctactgtcagcaagcaggaa
gacttcactgaagaagtatatgatctgaagaccaagcgtctgaagaggcaggagctgttc
tccagagagggcctgacatggcagaagatagtccagttcttcactcagcacctggagaag
gcagagcagcaggctgcagcacaggagctgaagagcatcctacaggctgccaagcagata
gtggggacagagcatggccaggacaccattgagagtgctgctgtcttcctgtttgagacg
ttccacaacaaggaccatgtgggtcacgaggagacgagggccatcaagcagatgtttggg
cccttcccctcctcggcagccgacgcctcctgtgctgctgtgtcccgggctgtggcccct
ctgggagagtcccaggtggaggagtttgttcgttcccagagctcctgtcgcgcccctcag
cgcggctcggccttcggacgcaacatcaccttctcctatgactgttacactctggacccc
caggaggccctgcctgggcggggggaccctgaggacgagacccctggtggaggcctggac
ttccacagcttcctcaacaaccaccaaggtcgcaggagtaatgggggagaggcggatgga
ggcaggcaaagcccgggaggggctcagagctctggggatgggaccatcctgagaggggag
gtggagaagtacctgaacggaggcaacatgatctcctccagccctgaggaactgtgcacc
tccctgtttgagatgctggcctccaccaagagtgatgacgagctgcagaatgagctgttt
gaactgctgggcccagagggatttgagatgatctctgttctcctccagagaaggtcttcc
atcgtggactctctcctttccatccctgcagacacgatcaactacccaccagacggtagc
cgtggaggagaggggggcagcaagcccacgtacggctgtcaggtgaccatccagtcgggg
aaggagaaagagatgatgaagatgcaccggagggaggagaagagggagaggaagaggggg
gagagacgttgggatgacaccgaatcctcttccgacctctactttgaccccaaggagatg
agagctcagagagagcaggccctgctgacagcacggcggtctcctgtgctgagcagagag
cgggtgtacgaacgcatccgctaccccaacgtctatgactgctacgccgaggccaccaag
acctccgccttcgtagggggagccaagctgatgttaccagaggggataaagagagagaac
aataagatgtatgaagaggtggagattcctcctagtgatcccatgtccatcggctttgag
gagaaacccatctacatctctgaactggacgagattggtcagttggtgtttaaggggatg
cagcgtctgaacaggatccagtctatagtgtttgagacagcctacaacaccaatgagaac
ttgctcatctgtgcccccaccggggccggcaagaccaacatcgccatgctgacagtcctc
catgagatcagacagcacctccaacctggaggggtcatcaagaaggatgagttcaagata
gtgtatgtagctcctatgaaggccctggcagcagagatgacgaactacttcagtaagcgg
ttggagccactgggcattgctgtcaaagagctcactggagacatgcagctaaccaaaggg
gagatcctgcgtacacagatgctggtgaccacccctgagaagtgggacgtggtgaccagg
aagagcgttggggacgtggccctgtcccagattgtaaagctcctcatcctggacgaggtg
catctgctacacgaggacagaggaccagttctggagagcctggtggccaggacactacga
caggtggagtcaacccagagtatgatccgtatcctgggtctgtcggccacgctgcccaac
tacctggacgtggcctccttcctccacgtcaacccctacatcggactcttctacttcgac
agccgcttcagacccgtgcccctcggacagagcttcgtcggcatcaagtccaccaacaag
atccagcagcttcatgatatggaggaggtttgctatgagaaggttctggagcagatcaga
aatggacatcaggtgatggtgtttgtccacgctcgtaatgccacggtgaggacagccatg
gggttgatggagatggctaagaaccggggagagtcttccttcttccagccagaccatgga
cctgactacggccagtgtgagaaatcaatccagcgttccaggaacaagcagatgaaggag
atgttcccagatggttttgggatccaccacgctgggatgctgcgtgctgaccgtagcctg
atggagagcatgttctccaggggttacctcaaggttctgtgctgcactgccacactggcc
tggggagtcaacctgcctgcacacgctgtcatcatcaagggcacccaaatctacgatgct
aagcgtggtaccctggtggacctgggcatcctggatgtgatgcagatcttcgggcgtgcc
gggcggcctcagtttgacaagtacggcgagggcaccatcatcacggcacatgacaagctg
agccactacctcaccctgctcacccagcagaaccccatagagagccagttcctagagacc
atggctgacaacctcaacgctgaggtatcactagggactgtgacgaacgtggaggaagca
gtgaggtggctgagttacacctacctgtacatccgcatgagagccaaccctctggcctac
gggatcaaccacaaggcctaccagatggacccaggtctggagctgtatcgtaaggaactg
gtggtgatggcagccaggaagctggacaaggccaggatgatccgcttcgaggagaggaca
ggatactttgcctccactgacctgggcagaaccgccagtcacttctacatcaaatacaac
accatggagacgttcaacgagctgttcaactcccagaagacagaggctgacatcctcagc
atcgtctccaaggccgaggagtttgaacaggtcaaggtgcgtgatgaggagatggaggaa
ctagagcagatgctgtgtaactactgtgagctgcctgctgcaggcggagtggagaacgga
tacggcaagatcaacatcctactgcagacctacatcggccggggagaggtggacagcttc
tccctcatctcagacctgtcctacgtagcacagaacgcagctcgtatcgtcagggctctg
tttgagattgctctgaggaagcgctggcctgccatgacctaccgcctgctcaacctgtgt
aaagtgatagacaagcgtctgtggggcttcgctcatcccctgagacagttctccatcctg
cctcacaatgtgctggcccgtctggaggagaagaaactctctgtggacaaactgaaagat
atgcagaaggacgagataggtcacatgcttcaccacgtgaacatcgggttgaaggtgaag
cagtgtgtccaccagatcccttccatactgatggaggccaccatccaaccaatcacacgc
accgtgctcagggtccgcctccagatcacccccgacttccagtggcacgaccagtgtcat
ggttcagtgggagagccctggtggctgtgggtggaggaccccatcaacgatcatatctac
cattcagagtacctgctcctacagaagaaacaggtggtgagtggggagccccaacaggtg
gtattcaccatccctatctttgagcccatgccctcccagtactacatcagagctgtgtca
gaccgctggctgggctcagaggctgtctgcatcatcaacttccaacacctcatcctgcct
gaaagacatcccccacatactgagctgctggacctgcagccgttgcccatcacctccctg
gggaacctggagtatgagagtctgtacaagttcacccacttcaatcccatccagacacag
atcttccacacgctctaccacacagacaccaacgtcctgctgggggcgccaacgggctcc
gggaaaaccatcgctgccgagttggccatgttccgagtcttcaaccagtaccctacctcc
aaggtggtgtacattgcccctctgaaagctctggtcagggagaggattgaggactggaag
atcaggatagaggaaaaactggggaagaaggtcgtggagctgacaggtgatgtgactcca
gacatgcgggccatcgccgcggccgacctgatcgtgaccacgccggagaagtgggacggc
gtgagtcgctcctggcagaaccgtagctacgtccagaaagtagccattctcatcatcgac
gagatccacctgctaggggaggacagaggtcctgtgctagaggtcatagtgtccaggacc
aacttcatctcctcccacaccaacaagactgtccgcgtggtgggcctgtccacggccttg
gcaaacgcacgagacctcgccgactggctagggattggacaggtgggtttgtttaacttc
cgtccctctgtgcgtcccgtcccattggaggttcacatccaaggcttcccaggacagcac
tactgcccccgcatggccagcatgaacaagcctgtgttccaagcgattcgcagtcactct
ccagccaagcctgttctgatctttgtgtcgtcgcggcgacagactcgtctgacggctcta
gacctgatagccttcctggccaccgaggacgaccctaaacagtggctgcaccaggacgag
actcagatgacagacatcatcgccacggtgagggagtccaacctgaagctgacgttggcg
tttggtatcggcatgcaccacgctggactacacgagcgagacaggaagactgtggaggaa
ctgtttgtcaactgcaagatccagatactgatagccaccagtactctggcctggggagtc
aacttccctgcccatctggtcattgtcaaaggtactgagtactacgatgggaagaccaga
cgctacgtggactaccccatcacagacgtgctgcagatgatgggccgtgcaggccgccct
cagtatgacgaccagggcaaagctgtgatcctggtccacgacatcaagaaagacttctac
aagaagttcctctacgaacccttccctgttgagtccagtctcctgggtgtcctgtcagac
catctgaatgctgagatcgctgcagggaccatcacctctaaacaggatgctatggactat
atcacctggacgtacttcttccgcaggctggtcatgaaccccagttactacagcctggat
gacatcagccacgagaccatcaacaagtacctgtccaacctggtggagaggagtctccga
gacctggagtgttcctactgtatggagataggagaggatgattgcaccattgaggccctg
acgtacggtcgtatctcctcctactactacctgaagcaccagacagtcaggatgttcaag
gagaggctgagggctgagctgcccatccaggacatcctctctgtcctcacggatgctgag
gagtacgcggagctgcccgtcaggcacaacgaggaccagctgaacagtgagctggctcag
cgtctccccctgcaggtcaacccccacagctacgacagcgcccacaccaagacccacctg
ctgctgcaggcccatttcagccgcgcccagctgccctgctccgactacggcaccgacacc
aagaccgtgctggacaacgccatacgcatctgtcaggccatgctggatgtagcagccaac
gagggttggctggtgactgctctcagcatctgtaacctagtgcagatgatcgttcagggc
aggtggctcaatgactcctctatactgaccttacctaccatagagcagcagcacctctac
ctgttcagcaggtggagctccaagggagggaagggcggggccaggggcttccacggacca
atagaagggctccctgagctgattgccacctgcgaggggcgggagaacaccttcgctgcc
atcgtgggagaggagcttcagccccatcagatctcccaggcctggtcgttcctcagccat
ctgccggtggtggaggtgcgtctgagtgtgaagggttggtgggaggggtgtggggagcag
acagagcgccccctccctgcggccggggggaagctcagggatgacagaagctggctggac
gtccacgctgaccaggagtacgtcctgcaggtctcactgcagcgcatcaacaccggccag
cagaggaggaagcaggacactaaggcccaggcccccaggttccccaagaataaggatgag
ggctggtttctggttctaggagaggtggagcgcagagagctactggccgtcaaacgcatt
ggatactgccgacaccgcagcaccatttccctggccttctacacccccgtgaagaccgga
aagtgtatctacacgctatacttgatgagtgacagttacctgggtctggaccagcagtat
gacctccacctcaacgtgacccctgcctgcatcgctgcccaggtcaacagtgaagtcact
gaggccatgggaggcttgtccgtcaagtga
DBGET
integrated database retrieval system
