Oncorhynchus masou masou (cherry salmon): 135522069
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Entry
135522069 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
omm04054
]
135522069
Pattern recognition receptors [BR:
omm04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
135522069
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
TIR_2
LRR_4
LRR_5
LRR_9
LRR_1
Motif
Other DBs
NCBI-GeneID:
135522069
NCBI-ProteinID:
XP_064804061
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All DBs
Position
30:12974624..12979421
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AA seq
579 aa
AA seq
DB search
MLCDIQKGPVLWLKKLRLLSFQIPNITSEQFGCLKNLKQLILSGNQITTVADFTFKELAK
LRFLDLRNNKISQITENSFFGLHCLETLNLELNPLETIEAFTFIHLTLLKHICLGDFQPL
PSELESSVNVNLTHIFGVFPQGLMHMNISSMWYTLNIIISSNSTPKPGISLQLSATTVFF
QDCWRPFFQSVVSLTAITERLLCGSHFAARYFTSLQYFGFNSVLSAAFDLNTLVEMRYLT
LMGVELYRQPGLATMFHNLTKLETLNLVTCRILSLEEEMNRDLHSLRQMSVHIPEEFSVM
ESFTEPLTNLRYLLLYNFRLDCSCDNTWLLAWAERQIHVQVVFYHPGEADVTCKNENGIQ
DFVRYSAANCSLDVGFVLFLCTSLGLLIFMLVVLLHQLAREYLLAFCHIIRCWLEEAVRR
PNLRGRYXYDXFVSYIGRDKHWVVEQLLPGLEQRGPPFLRLCLHSRDFQLGKDIVDNITD
SLYGSRYTVCVVSHNYLRSNWCSLELRLATLRLLVEQRDILILVFLEDIPPRQLSAHHRL
ARLVKTRTYLDWPQDQAMQPAFWDRLWTKLVPPEPHPSQ
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgctttgtgacattcaaaagggtcccgttctgtggctgaaaaaactgcgcctgttaagc
tttcaaatcccaaacatcacctcagagcagtttggttgcttgaagaatctgaaacagctg
attttgtcaggaaatcagattaccactgttgcagactttacatttaaggaactagctaaa
ttgaggttcttagacctacggaataacaagatctctcagataacagagaacagtttcttt
ggcctgcattgcttggaaaccctaaatctggaactaaacccacttgaaacgattgaagca
tttaccttcatccacctcactttgctgaagcacatatgtttaggggactttcaacctttg
cctagtgagttggagagtagcgtgaatgtgaatctgacacacatatttggtgtgttccct
caagggttaatgcacatgaacatttcttccatgtggtacaccctcaacatcatcatcagc
agcaacagcaccccaaaaccagggatttcccttcagctcagtgccacaactgtattcttc
caggactgctggagaccgtttttccagtccgtcgtcagcctcacagccataacggaacgc
ctcctgtgtgggtctcattttgccgcaagatacttcacctccctacagtactttggcttc
aattctgtgctgtcagctgcatttgacctgaacacacttgtggagatgaggtatctgacg
ctaatgggagtggaactctaccggcagccagggctggccactatgttccacaacctcacc
aagctggagaccctgaacctggtcacctgcaggatcctcagtctggaggaggagatgaac
agagacctgcattccctcagacagatgtcagtccacatcccagaggagttcagtgtgatg
gagagcttcacagagccgctgaccaacctgaggtacctgctactctacaattttcgcttg
gactgcagctgtgacaatacctggctgctcgcctgggctgaaagacagatacatgtccag
gtcgtattttatcaccctggggaagcagacgtgacatgtaaaaatgagaatggaatccag
gactttgtcaggtactcagcagctaactgttccctggatgtgggctttgtcctgttcctc
tgcacctcgctgggcctgctcatcttcatgctggtggtgctgctccatcagctggctcgg
gaatacctgctggccttctgccacatcatccgctgctggctggaagaggctgtacggagg
cccaacctcagggggcgctactgatatgatngctttgtgtcgtacattgggagagacaag
cactgggtggtggagcagctgcttccgggcctggagcagagggggcctcccttcctgcgt
ctatgtctgcacagcagggacttccagttggggaaggacattgtggacaacatcacagac
agcctctacggcagccgctacaccgtgtgtgtggtgagtcataactacctgcgcagtaac
tggtgctccctggagctgcggctggccaccctccgactgctggtagagcaaagggacatc
cttatcttggtcttcctggaggacatccctcctcgccagctgtctgcccaccaccgcctg
gccaggctggtcaagaccaggacctacttggactggccccaggaccaggccatgcagcct
gccttctgggatcgtctgtggaccaaactggtccctcctgaaccacaccctagccagtga
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