Oncorhynchus masou masou (cherry salmon): 135522122
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Entry
135522122 CDS
T10723
Name
(RefSeq) valine--tRNA ligase-like
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
135522122
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
omm01007
]
135522122
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
omm03016
]
135522122
Enzymes [BR:
omm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
135522122
Amino acid related enzymes [BR:
omm01007
]
Aminoacyl-tRNA synthetase
Class I (U)
135522122
Transfer RNA biogenesis [BR:
omm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
135522122
Prokaryotic type
135522122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
GST_C
tRNA-synt_1_2
GST_C_2
Arc1p_N_like
GST_C_3
tRNA-synt_1e
Jag_N
Motif
Other DBs
NCBI-GeneID:
135522122
NCBI-ProteinID:
XP_064804176
LinkDB
All DBs
Position
30:14820130..14834198
Genome browser
AA seq
1276 aa
AA seq
DB search
MASLYVSPHPDDFRSLMALVAAEFCPSRLCTLIEDPPASLALCSRPSLVLGSGGGEVLSG
ASAVAWYLASQGKRIGSNAKQESQVWQWLSFADNELTPVSCAVVFPLLGVLGVDKKLQQS
SHAEMMRVLNVLDKNLEPRTFLVGDSLTLADIAVATAALLPFKYALEPSNRKALTNVTRW
FLTCVNQPQFVKVLGQISLCEKMVPVTPKPSVAPVPAANANPTADANATNGKPKTEAQLK
KEAKNREKLEKFQKKKEMEEKKKQEKKLAPLTEKKAKPEKKDLGVISYDVPTPPGEKKDV
LSPLPDSYSPLYVEAAWYSWWEKQGYFKPEYGRKSISEPNPRGVFMMCIPPPNVTGSLHL
GHALTNAIQDCLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLMRERGLSRHDLGRDQF
IQEVWKWKNEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSYAVQEAFIRLHEDGVIYRSK
RLVNWSCTLNSAISDIEVDKKELTGRTLLPVPGYKDKVEFGVLVSFSYKIEGSDEEVIVA
TTRIETMLGDSAVAVHPADPRYQHLKGKMVLHPFCDRKMPIVFDEFVDVNFGTGAVKITP
AHDHNDYEVGNRHNLAFINILDENGLLINVPAPFLGMKRFEARKAVLQALKDRGHFKETK
DNPMVVPVCSRSKDIVEPLLKPQWYVDCADMGKQAADSVREGRLKIIPDHHHKTWFNWLD
NIRDWCISRQLWWGHRIPAYFVTVTDPSVTPGEDMDGHYWVSGRTEEAARDKAAKRFNVS
TDKVTLRQDEDVLDTWFSSGIFPFSIFGWPNETQDLNVFYPGTLLETGHDILFFWVARMV
MMGLKLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGLYAQLQDSNL
DPVEVEKAKQGQKSDYPTGIPECGTDALRFALCAYTSQGRDINMDVNRILGYRHFCNKLW
NAVKFAMRTLGDNFVPSEKAQLCGEESVSDRWILSRLCSAVGLCNAGFQAYDFPAITTAI
YNFWLYELCDVYLESVKPVFSRAEEDSGSQSQAEVCRQTLFTCLETGLLLLAPIMPFVGE
ELYQRLPRRRSQDGHPSIHVTPYPETEEFCWHSEDVDRQMEFVMTVVRTIRSLRADYNLT
KTRADCYLQCIDSETMSLVEQYSLQIQTLSLSQTIQPVSATGAVPEGCAVAIASDRCTVH
LMLKGLIDLEKEVAKLTVKKGELEKQMDKLREKMEKSDYKEKVPVKVQDLDAEKLRQSQT
ELEKATEAIDNFKRMV
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgctctacgtctccccccaccctgacgacttcaggagcctcatggctttggtc
gctgcagagttctgcccctctcggctctgcacactcatagaagaccctcctgcctccctg
gccctgtgctctcgccccagcctggtgctgggctctgggggaggtgaggtgctctctggg
gccagtgctgttgcatggtacctagcctctcaggggaagaggatagggtcgaatgctaaa
caggagagccaggtgtggcagtggctcagctttgcagacaatgagctgactcctgtgtcc
tgtgctgtggttttcccactactgggggtgttgggagtggataagaagcttcagcagagt
tctcatgctgagatgatgcgcgtgctaaacgttctagataagaacctggagcctcgaaca
ttcctggtgggagacagcctcactctggctgacatcgctgtggcaaccgcagcactcctg
cccttcaaatacgccttggagccgtccaacaggaaagccctgacgaacgtgaccaggtgg
tttctgacctgtgtcaaccagcctcagtttgtcaaggtcctgggacagatctctctttgt
gagaagatggtgcccgtcacacccaaacccagcgttgctcctgttcctgctgctaacgct
aatccaactgctgatgccaacgctaccaatggcaaaccaaagacagaagctcagctgaag
aaggaggctaaaaacagagagaagttagagaagttccaaaaaaagaaggagatggaggag
aagaaaaagcaagaaaagaaactggcacctctgacagagaaaaaggccaaaccagagaag
aaggacctgggagtgatctcatacgacgtccccacccctcctggagagaaaaaagatgtc
ctgagccccctgccagactcgtacagtcctctgtacgtggaggcagcctggtactcctgg
tgggagaagcagggatacttcaaacctgagtacgggcggaagagtatcagtgagcctaac
ccccgtggagtgttcatgatgtgtatccctccgcccaatgtgacgggatctcttcactta
ggccatgccctaaccaacgccatccaggactgtctgaccagatggcaccgtatgcgtggc
gagacgaccctgtggaacccaggctgtgaccacgcgggcatcgccacccaggtggtggtg
gagaaaaaactgatgagggagaggggcttgagccgtcacgacctggggagagaccagttc
atccaagaggtctggaagtggaagaacgagaagggagaccgtatctaccaccagctgaag
aagctgggttcctctctggactgggacagagcctgcttcaccatggaccctaaactgtcc
tatgcagtccaggaggcgttcattcgtctgcatgaggacggcgtgatctacaggagcaag
aggctggtcaactggtcatgcaccctcaactctgccatctcggatatagaggtggataag
aaggagctgactggcaggactctgctgcccgtgcctggctacaaggacaaggtggagttt
ggagtactggtctccttctcctacaagatagagggatcagatgaggaggtgattgtggcg
accactcgtatagagaccatgctgggagattctgctgtggctgtccaccctgctgacccc
agataccagcaccttaaagggaagatggtgcttcatcccttctgtgacaggaagatgccc
atcgtgtttgatgagttcgtggacgtcaactttggaacaggtgctgtgaagatcacccca
gcccatgaccataatgattatgaggttggaaacagacacaacctggccttcatcaacatc
ctggatgagaatggcctgctcatcaacgtgccagctccattcctgggtatgaaacgtttc
gaagcgaggaaggctgtgctgcaggctctgaaggacagaggccatttcaaggagaccaaa
gataaccccatggtggtgcctgtctgcagtcgttctaaggacatagtggagcccctgctg
aagcctcagtggtatgtggactgtgctgacatgggcaagcaggcagctgactcggtccgg
gagggaagactcaaaatcatcccagaccaccaccataagacctggttcaactggttggac
aacatcagggactggtgtatctctcgtcagctgtggtggggtcacaggatcccagcctac
tttgtcaccgtgactgacccttcagtcacaccaggagaggacatggatggtcattactgg
gtgagtgggaggacagaggaggcggccagagataaagctgccaagcgcttcaacgtctcc
actgacaaggtcaccctccgacaggatgaggatgtcctggatacatggttctcctctggt
attttccccttctccatcttcggctggcccaatgagacccaggacctgaatgtgttctat
ccaggcaccctgctggagacgggtcatgacatcctgttcttctgggtggcccgcatggtg
atgatgggcctcaaactcactggcaagctgcccttcaaagaggtgtacctccatgcggtg
gtgagggacgcccacgggaggaagatgagcaaatctctggggaacgttatcgaccccctg
gacgtcatcacaggcatctctctggagggtctgtatgcccagctgcaggacagtaatctg
gacccagtagaggtagagaaggccaagcagggacagaagtcggactaccccactggtatc
ccagagtgtggcacagatgccctccgcttcgccctgtgtgcctacaccagccaaggtagg
gacattaacatggatgtgaatcgtatccttggttaccgtcacttctgtaacaagctgtgg
aatgctgtgaagtttgccatgaggacgctgggagacaactttgttccttcagagaaagcc
cagctgtgtggagaggagagcgtgtcagaccggtggattctgtcccgtctgtgttctgct
gtgggtctgtgtaatgcagggttccaggcctacgacttcccagctatcaccaccgccatc
tacaacttctggctctacgagctctgtgacgtctatctggagagtgtgaagccagtgttc
tccagggcggaggaggacagtgggtctcagagccaggctgaagtctgcagacagactttg
ttcacctgcctggagaccggcctgctcctcctagctcccatcatgcccttcgtgggcgag
gagctctaccagaggttgccacggcgacgatcccaggatggccaccctagtatccatgtc
acgccctaccctgagactgaggagttctgctggcacagtgaggatgtggaccgtcagatg
gagtttgtgatgaccgtagtccggaccatccgttcactcagggccgactacaacctgacc
aagacacgtgccgattgctacctccagtgtatagacagtgagacgatgtctctggtggag
cagtacagtctgcagatccagaccctgtctctttcccagaccatccagcccgtctcagcc
accggggccgtcccagagggctgtgctgtggccattgcctccgacaggtgcaccgtccac
ctcatgctcaagggtctgatagacttggagaaggaggtggccaagttgactgtgaagaag
ggagagctggagaaacagatggataaactgagagaaaagatggagaagagtgactacaag
gagaaggtgcctgttaaagtacaggatctggatgctgagaagctgcgtcagagccagacg
gagctggagaaagcaacggaagccatagacaacttcaagagaatggtgtaa
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