Oncorhynchus masou masou (cherry salmon): 135522169
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Entry
135522169 CDS
T10723
Name
(RefSeq) DENN domain-containing protein 4B-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135522169
Membrane trafficking [BR:
omm04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
135522169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_long
PPR_3
DUF2464
PPR
SPA
Motif
Other DBs
NCBI-GeneID:
135522169
NCBI-ProteinID:
XP_064804264
LinkDB
All DBs
Position
30:complement(16559456..16605063)
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AA seq
1501 aa
AA seq
DB search
MTEEKCPQLVDYFVVAGLAPGGSAPLDEEGQQRGGRVVEPVIDLAVIARGLGEEVPEGFT
CIEKTQGGHPAELSTGLINNPHMYLCYRRGHDKPPILDLGVLYEGKEVVKQGWYVIETTP
YSRSASLSSGGPATHRTFLTYRRAPESQALHTLGVTDISLLLPSKGEVAPHTFCRVEKNL
NTGIWGPALYLCYKRAVAKANALVYEAGLISRYPEADVESFPLPESVPMFCLPMGVTVES
WPLNTKYQLPVFSTFVLTSACGDKVYGAAIQFYEAFPRECLSERQSVRLGLVSVVDRRPI
ANRTLQVKKSVCVLSHWPFFTVFQKFLTFVYRYSISGPHVLPLEKHISSFMHNVPFPSPQ
RPRILVQLSPYDNLLLCQPVSSPLLLSGASFVKLLQNLGPENACVLLLAVLTEHKLLLHS
LRPDVLTSVSEALVSMTFPLRWHCPYIPLCPLRLADVLCAPMPFIVGVHSSYFDLYDPPT
DVVCVDLDTNTIFQAEDKKPLSWRSLPRKHGKMLVNTLTNLMKTLEKIYTTGQEEATLEF
LLTDYDLIYGRQKQLELEIQEAFLRFMSCLLRGYRAYLLPITQAPSDRTTDCSSLFNLQG
FLKSRERTHQKFYTQLTRTQMFTQFIEECSFVSDCHACLEFFDECVQKQSDVEKPEEVRL
IDLDEAHSGEHTVFIMPPEEPQEPDGSECPTHYSYETFPVLCMDLFDQPQDQLRVPTKGS
APSSPAPRRTKQEIKLAQKRAQIYSAVPDMWSKCLLGHCYGLWFIYLPTFVRAESAKVRA
LQTAYEVLKHMETRKVVLPDEVCYRILMQLCGQYGQPVLAVRVLLEMKKAGITPNTITYA
YYNKAVLESKWPSTNQGGRLRWAKLRNVLMAVAQFRQPVRQWQKSGSAGSRTDTMDSNQR
SRPQSNLIRQSSWSGLSESSSHESLTGSMVKSNSLNSMRGSTDKSKLSMKAVLRNAGANG
CSDPTSRKPPVGPRDTSTPSPFPPSGVLVRRDQVCLSTFYKDCAETADSDPDCSCQPGER
DGRPPGPRDTVSRKAVDENYNHVSPPSRGSLTGKLQQLLTPTRHRVSGRRAASVDARRSG
GENGPVSLVSEQRQSRKAQVAESLLKAKERLYNATSESSLSVGSDVDLPDTTNLAFPLRK
SWDTNQEGAGLQVLMSSCSLCRSCNSLVYDEEIMAGWTSDDSNLNSSCPFCSTTFVPLLN
AEICDLGPVSSTHHSLERTNWNTEDEVESAAKPPGGQEAILGHNGVSEDSSSETSSYSET
SSATMGSSVGESPQVTVAYLSPLVLRKELESLLENEGEAVLAQGQLLDSHSIIFWNLVWY
FHRLGLPSNLLQLVRSSPLANQLAQTSENSAVRVRLLWDTLTPDTDHWPPLYILWRIHSG
VPMRNHSWRRHNHPFTLAFLEEVLRWVGMNEIHKGITLFLETIAKQPGTPKIQRSLYREM
LFLTLAAMGRDHVAAFDKKYKAAYQRLSGSLGRGELRRKRAQPPSLKAVDCRRSFLLPLE
C
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggagaaatgcccccagctagtggactactttgtggtggcagggctggctccg
gggggctcggccccgctggacgaagagggccagcagagagggggccgggtggtggagccg
gtcatagacctggcggtgattgcacggggcttgggggaggaggtgcctgagggcttcacc
tgcatcgagaagacccaggggggccacccggccgagctgagtactggactcatcaacaac
ccccacatgtacctgtgttaccgccgtgggcacgacaagccacccatcctcgacctcggg
gtgctgtacgagggcaaagaggtggtgaagcagggctggtatgtgatcgagaccaccccc
tacagccgctcagccagcctgagctccggggggcccgccacccaccgcaccttcctgact
taccgccgggccccagagtcccaggccctccacaccctgggggtcacagacatctccctc
ctgctgcccagtaagggggaggtggccccccacaccttctgccgggtggagaagaacctc
aacactggcatatggggtccagccttatacctgtgctacaagagagctgtagccaaagcc
aatgccctagtctatgaagcaggtctgatcagtcggtatcctgaagcggatgtggagtcg
ttccccctgccagagtctgtgcctatgttctgcctgcccatgggtgtgacggtggagagc
tggcccctcaacaccaagtaccagctccctgtcttctctaccttcgtcctcactagcgcc
tgtggcgacaaggtttacggtgctgccatccagttctacgaggcgttcccacgggagtgc
ctctcagagcggcagagcgtccgtctgggcctggtgagcgtggtggaccggcggcctatc
gccaaccgcaccctgcaggtgaagaagagcgtgtgtgttctctcccactggcccttcttc
accgtcttccagaagttcctcaccttcgtctaccgatactccatctccggaccccacgtg
ctgcccctcgagaagcacatctccagcttcatgcacaacgtcccgttcccttcccctcag
cggcctcgcatcctagtgcagctctccccctatgacaaccttctcctctgtcagcctgtc
tcctcccccttactgctcagtggtgctagctttgtgaagctgctgcagaacctgggccct
gagaacgcctgtgtcctgctgctggccgtgctgacggagcacaaactactgctacactcc
ctccgccccgacgtcctcacctctgtcagcgaggccctggtgtctatgacgttccctctg
cgttggcactgcccgtacatacccctgtgcccgctgcggctagcagacgtactgtgtgcc
cccatgcccttcatcgtgggcgtccactccagctactttgacctctatgacccccctact
gacgtggtgtgtgttgacctggacaccaacaccatctttcaagcagaggacaagaagccg
ttgtcatggcgatcactaccaaggaagcatggcaagatgctggtgaataccctcaccaac
ttgatgaagactctggagaaaatctacaccactggccaagaggaggccaccctggagttc
ctgctgacggactatgacctgatctacgggcgtcagaagcagctggagctggagatccag
gaggccttcctgcgcttcatgagctgcttgctgaggggctaccgtgcctacctgctgccc
atcacccaggccccctcagacaggaccaccgactgcagctccctcttcaacctgcagggc
ttcctgaagtctcgtgaacgcacccaccagaagttctacacccagctgaccaggacccag
atgttcactcagttcatcgaggagtgctcattcgtcagtgactgccacgcctgtctggag
ttcttcgacgagtgtgtccagaagcagtcggatgtggagaagcctgaggaggtgcgtctg
atagacctggacgaggcccacagtggggagcacacggtattcatcatgcccccagaggaa
ccccaggaaccagacggttcagagtgccccactcactacagctatgagacgttccctgtg
ctctgcatggatctgtttgaccagcctcaggaccagctacgtgtccctaccaaggggagt
gcccccagcagccctgccccgcgacggactaaacaggagattaagctggcacagaagcgg
gcacagatatactcggcagtgcccgacatgtggtccaaatgcctgctgggccactgctat
ggtctgtggttcatatacctgcccacctttgtgcgggcggagagtgccaaggtgcgtgcc
ttgcaaacggcatacgaggtgctcaagcacatggagaccaggaaggtggtactaccggat
gaggtgtgttacaggatcctgatgcagctgtgtgggcagtacgggcagcctgtgctcgct
gttagggtacttctggagatgaagaaagctgggatcacacccaacaccatcacctatgca
tactacaacaaggcagtgctggagagcaagtggccctctaccaatcagggtggtcgtcta
cgctgggccaagttgcgtaacgttctgatggccgtggcgcagttcagacagccagtcaga
caatggcagaaaagtggttcagcaggctcgcggacagatacaatggacagtaaccaacga
tcccgcccacaatctaacctgattcgtcagtccagctggagcggccttagtgaaagctcc
agccacgaatcgctgacggggtctatggtgaagagcaacagcctgaacagcatgagaggc
tcaacagacaagtctaagctctcaatgaaggcggtgctccggaacgcaggtgccaatggc
tgcagtgatcccacctcccgtaaaccccccgtggggccacgagacacctccaccccttct
ccctttccccctagtggtgtcctggtgcgccgcgaccaggtgtgcctgtccaccttctac
aaagactgtgccgagacggccgactctgaccctgactgcagctgccagcctggggagaga
gacggcaggccacctgggcctagagacactgtgagccgcaaggccgtggacgagaactac
aaccatgtgtcaccaccgagtcggggcagcctgacggggaaactgcagcagctgctcacg
cctactcgccatcgagtctcggggcggcgggccgccagtgtagacgcccggcgctcgggg
ggagaaaacgggcctgtgagcctggtgtcagaacagagacagtcccgaaaagcccaggtg
gctgagagcctactgaaggctaaggagaggctctacaatgctacctctgagagttctctg
tcggtggggagtgacgttgacctccctgacaccaccaatttggcctttcctctccgcaag
tcctgggacaccaaccaagagggagcgggactacaggtgttgatgtcgagctgctccttg
tgtcggagctgtaactccctggtctatgatgaggagataatggccgggtggacgtctgac
gactccaacctcaactccagctgtcccttctgctcgaccaccttcgtcccccttctcaac
gctgagatctgtgacctaggacccgtcagcagcactcaccatagcctggaacgtaccaac
tggaacacggaggatgaggtggagagcgcagccaagccccctggtggccaggaggccatc
ctgggtcacaacggtgtgagtgaggactccagttctgagaccagcagttattctgagacc
agcagcgctaccatgggttcatcggtgggcgagtctccccaggtgacggtggcctacctg
agcccattggtgctgcgcaaggagcttgagagcctgctggagaacgagggtgaggcggtg
ctggcacagggccagctcctggacagccattccatcatcttctggaacctagtgtggtac
ttccatcgcctgggcctgcctagcaacctgctgcagctggttcgctcctcaccgctggcc
aaccaactagcacagacttcagagaactcagcagtgagggtgaggctgctgtgggacaca
ctgacacctgacacagaccactggccccccctctacatcctgtggaggatacacagtggc
gtacccatgcggaaccacagctggcggaggcacaaccaccccttcaccctggccttcctg
gaggaagtgctgcgctgggtcggcatgaacgagatacacaagggaatcaccctcttcctg
gaaaccattgctaagcaaccgggcacgcccaagatacaaaggagtctgtacagagagatg
ctcttcctcacactggctgccatgggtagagatcacgttgctgcgtttgataagaaatac
aaggccgcgtaccaacggctgagtggctccttggggcgcggggagctccgcaggaagcga
gcccagccacctagcctcaaggctgtggactgcagacggagcttcctgctgcccctcgag
tgctga
DBGET
integrated database retrieval system
