Oncorhynchus masou masou (cherry salmon): 135522230
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Entry
135522230 CDS
T10723
Symbol
sema6cb
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C isoform X1
KO
K06842
semaphorin 6
Organism
omm Oncorhynchus masou masou (cherry salmon)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
135522230
NCBI-ProteinID:
XP_064804378
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Position
30:complement(18511110..18642985)
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AA seq
1106 aa
AA seq
DB search
MRLVPGSPRPLPLLAVVLALALTALLPHLTMGVTPFPQDLEPISIGGREHSYLYPSFQGL
MSDNDTVRLGLDFQRMLRINHMLYIAARDHVFAVSLSASSEQIVPQQKLTWKTKDVDKCT
VRGKNSDECYNYIKVLVPRNDETLFACGTNAFNPTCRNYKMSTLEQDGEEVVGQARCPFE
SRQSNVGLFAGGDFYSATMTDFLASDAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIE
YGNYVYFFFSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPG
DSFFYFDVLQSLTNVLQINHRPAVLGVFTTQANSITGSAVCAFYMDDIEKAFNGKFKEQR
NSESAWTPVPEEQVPKPRPGCCSGDGSAAAYKSSTTFPDDTLTFIKNHPLMDEAVPSVNH
RPYFTRTTSRFKLTQLAVDTSAGPYKNHTVLFLGSEDGRVLKILASTQLNASFSTQLLED
IDVYNPTKCKVRGEDRRVLGLELDREHHALFVAFSSCVVRVPLSRCNDYGSCKKSCLSSR
DPYCVWQRTGSCVTVVPRLRGGFEQDVENGYPHYPDSCHDVLATTRKQNTLADSAYGKTT
PTTTASTTNQVALFPKVAGDSERGTGPDGSPPVPVGDQGSPDSEAISVEMEGVRRPPEME
KTNHSVHYTLLIACVLVAFVLGAFLSGFLVSCYCNHTGHKNKRLAKDPEAPIPHALSLRS
LAKLNGLLECQNKEDKMEVSSPKLYNSFFQNGKEHHQGAPRRNGGHHPGMSMGDQVHPHH
LHHSSELSGLPTPDSTPELPIKNMKAFKNQWEKNQNCNNAKEPKSHNMGQGTRPSSGQLH
QQIYPYSHSFSNGQALANGHALVGGPQHLEERKIHNTERMLVQQPYPCYSQKVMEVTSLD
ELLKHIHEANASKNAQVMTSSGLSASGGCHGGQLAFSNRVQPHIPETESAPYYSSSTLPR
DSLSRRMDVPPDMPHHHQSTLERRHSSQRHSLITAATKIANGGGGGGMVHRQQSFSQRNG
HQHQPPAMLARMNSTGSACEIHYPLIPNGYLTRQQSYNGEQQEDTGGYLHRGAIVRRTTS
LKPDVPPKPLFIPASSPVTQQGNFNY
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggtgcccgggtcgcctcggcccctcccccttctggcggtggtcctggctcta
gccctcacagcactcttacctcacctgaccatgggagtcacacccttcccccaggacctg
gagccaatcagcattggggggagagaacactcctacctgtacccaagcttccagggcctc
atgtcagacaacgatacagtacgactgggcctggacttccagaggatgctccggatcaac
cacatgctctacatcgcagccagggatcatgtgtttgctgtcagtctcagcgcctcctct
gagcagatcgtcccacaacagaaattgacttggaagacaaaggacgtggataaatgcaca
gtgagggggaagaacagcgatgagtgctacaactacatcaaagttctggtcccacgcaat
gacgagacgctatttgcctgcggtaccaacgcatttaaccccacctgccgcaactacaag
atgtccacactggaacaggacggtgaggaagtggtgggtcaggcccgctgtccctttgag
tctcgccaatccaacgtcggcctctttgctggtggcgatttctactcggccaccatgaca
gacttcctggcgagtgatgcggtaatttaccgtagtctgggagagagcagcccggtgctt
cgtaccgtgaagtacgactccaaatggctacgagagcctcatttcctccatgccattgag
tacgggaactatgtgtacttcttcttcagtgagattgctgtggagtacaccacacttggc
aaggttgtgttctccagagtggctcgtgtatgtaagaacgacaacggaggttctcccagg
gttctagagcgttactggacatcgttcctcaaagcgcggctcaactgctcggtgccaggc
gattccttcttctactttgacgttctgcagtcgctgaccaacgtgctacagatcaatcac
agaccagccgtgctgggggtcttcactacacaggccaacagtatcacaggctcagcagta
tgtgcattctacatggacgacattgagaaggctttcaacgggaagttcaaggagcagagg
aacagtgagtcagcctggacacccgtgcctgaggagcaggtacccaaacccagaccaggc
tgctgttccggcgacggctctgccgctgcctacaagtcgtccacgaccttccccgacgac
accctgaccttcatcaagaaccaccccctgatggacgaggctgttccctccgtcaaccac
cggccctacttcacacgcacaaccagcaggttcaagttgacccagctagcagtggatact
tcagctgggccctataagaaccacacggtgctgttcctggggagcgaggacggcagggta
ctaaagatcctggccagcacccagctcaacgcctccttcagcacacagctactggaggac
atcgatgtgtacaaccccaccaaatgtaaggtgcgcggagaggacagacgggttctggga
ttggagctggacagggaacatcacgccctgtttgtggccttctccagctgtgtggtccga
gtacctctgagccgctgcaatgactacggctcctgcaagaagagctgtctgtcctcgagg
gacccttactgcgtgtggcagaggactgggagctgtgtcacagtggtgcccagattgagg
ggcggatttgagcaggatgtggagaacggctaccctcactaccccgacagctgccacgac
gtcctggcgaccacacgcaagcaaaacactcttgctgattcagcatatgggaagaccaca
cccacaacaaccgccagcacaaccaatcaggtggccctattccctaaggtggcaggtgac
tctgaaagaggtacaggtcctgatggcagtcctccagtcccagttggggaccaggggtca
cctgactcggaagcaatcagtgtggagatggagggtgtccgacggcctcccgagatggag
aagaccaaccacagtgtccactacaccctgctgattgcctgtgtgctggtggcctttgtc
cttggagccttcctctcaggctttctggtctcctgctactgcaaccacactggccacaag
aacaagaggctggccaaggacccagaggcccccattcctcacgccctatccctacgcagc
ctggctaagctcaatggcctgctggaatgccagaacaaggaggataagatggaggtgtcc
tcgcccaagctctacaactccttcttccagaacgggaaggagcatcatcaaggagcaccc
agacggaacggtggtcaccacccaggaatgtccatgggagaccaggtccacccccatcac
ctacaccactcttcggagctctcgggtctgcccaccccagactccacccctgaactgccc
atcaagaacatgaaggctttcaagaaccagtgggagaagaaccagaactgcaacaatgcc
aaggagcccaagtcccacaacatgggacaagggaccaggccaagctcaggccagctccac
cagcagatctacccctactctcacagtttctccaatgggcaagctctggccaatgggcat
gccttagtcggtggaccccagcacctggaggaacgcaagatccacaataccgagcgcatg
ttggtccagcagccttacccctgctactcacagaaggtgatggaggtcacgtcgctggat
gagctgctcaaacacatccacgaggccaacgccagcaagaacgcccaggtcatgacctca
tccggcctgtcagccagcggcgggtgccatgggggtcaactagcattttccaaccgtgtc
cagccgcacatccccgagacggagtctgcaccctactacagctcatccaccctgccccga
gacagcctgtcccgccgcatggacgtacctccagacatgccccatcaccaccagtccacc
ctggagcggagacactcttcccagagacactcactgattaccgctgccactaagattgcc
aacggagggggtggtggagggatggtccaccgacagcaaagcttcagccagcgtaacggc
caccagcaccaaccgcccgctatgctggctcgaatgaactccaccggcagcgcctgcgag
atccactacccgctcatccccaacgggtacctgacacgccagcagagctacaacggagag
caacaggaggataccggaggatacctccaccggggggccatagtccgccggaccacctcc
ctcaaacccgacgtccctcccaaacccctcttcatccctgcctcctctcccgtcacccaa
cagggaaacttcaactactga
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