Oncorhynchus masou masou (cherry salmon): 135522250
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Entry
135522250 CDS
T10723
Name
(RefSeq) retinoic acid receptor RXR-alpha-B-like
KO
K08524
retinoid X receptor alpha
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03320
PPAR signaling pathway
omm04148
Efferocytosis
omm04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
135522250
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
135522250
03320 PPAR signaling pathway
135522250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135522250
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
omm03310
]
135522250
Transcription factors [BR:
omm03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
135522250
Nuclear receptors [BR:
omm03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
135522250
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
135522250
NCBI-ProteinID:
XP_064804483
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Position
1:complement(17739033..17776273)
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AA seq
511 aa
AA seq
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METKPFLSFGFLKSQCSVAPPPQRWCPGETGGSPTACLCFTGICPLHQPRRPTDPSGQLS
SPSLRSHHAHRRMGAHRLHPSLLIPSSVSSSGPPHSPICTRSSPITSLALPFSVSSRPAG
HHSTSSSMGFSPQLSFPVIPSSSIIISTEDIKPPLGQNRWLKVPSQPTCTCLSFNKHICA
ICGDRASGKHYGVYSCEGCKGFFKRTVRKELTYTCRDNKDCLIDKRQRNRCQYCRYQKCL
AMGMKREAVQDERQRAKERRESEADSLGCANEDMPVERIEEAELAVELKTKTCIKGSLGV
PTNSPNDPVTNICQATDKQLFNLVEWAKMIPHFSELALDDQVILLRAGWNELLIASFSHR
SITVNDSILLANGLQLHRNSAHSAGVGSIFDRVLTELVSKMRDMLMDKSELGCLRAIVLF
NPDSKGLSNPGEVEALREGVYASLEAYCKHKYPGQPGRFAKLLLRLPALRSIGLRFLEHR
FFFKLIGDTPVDTFLTEMLEAPRQMTKQHCS
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaaaccattcctttcttttggcttcctcaagagccagtgctcggtagcccca
cctcctcagcgatggtgcccgggggagacgggcggctcgcccacagcatgcttgtgcttc
acaggcatttgcccacttcaccagcccaggagacccacagacccctccggtcagctgtcc
tcaccatcgctccgctcacaccacgcccataggagaatgggtgctcaccgattgcaccca
tctctgctcatcccatcgtctgtgagctcctcaggacctccacactcacccatctgcacc
cggagctcgcccatcaccagcctggctttgcccttttctgtcagcagccgtccagcggga
caccactctacctcctccagcatgggcttcagcccgcagctcagcttcccagtgatcccc
agtagcagcatcattatcagcacagaggacatcaaacccccactgggccaaaacagatgg
ctaaaggttccttctcagcccacatgcacctgtctctcctttaacaaacacatctgtgcc
atctgtggagaccgcgcctcaggtaaacactatggagtatatagctgtgaaggttgcaag
ggcttcttcaagagaacagtgaggaaagagctgacgtatacctgtcgagacaacaaggac
tgtctgattgacaagcgccaacgcaaccgatgtcagtactgccgctaccagaagtgtctg
gccatgggcatgaagagagaagctgtgcaggacgagcgccagagagccaaggagaggcgc
gagagtgaggcggactcgttaggttgtgctaacgaagacatgcctgtggagaggatagag
gaggcggagctcgctgtggagctaaagaccaagacatgcatcaaggggagcctgggcgtg
cccaccaactcacccaacgaccctgtgaccaatatatgccaggcaacagacaagcagctc
tttaacttggtggagtgggccaagatgatcccccacttctcagagctggccctggacgac
caggtcatcctcctaagagcagggtggaatgagctcctcatagcttctttctcccatcgc
tccatcactgtgaacgacagcattctgctagcaaacggactccaactgcatcgcaacagc
gcccacagtgcaggggtggggtccatctttgacagagtgctgactgagcttgtgtcgaaa
atgcgagacatgctgatggacaagtctgagttagggtgccttcgagccatcgttctcttc
aacccagactcaaaaggcttgtcaaacccaggggaggttgaggctctcagagaaggggta
tatgcttcactggaggcatactgtaaacacaaataccccggccaaccaggaagatttgcc
aaactgttacttcgattgccagccctacgttccattggcctcaggtttctagagcaccgg
ttcttcttcaaactgataggggatacacccgttgacacattcctcacggaaatgttggaa
gctccacgccaaatgacgaaacagcactgcagttga
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