Oncorhynchus masou masou (cherry salmon): 135522284
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Entry
135522284 CDS
T10723
Name
(RefSeq) high affinity nerve growth factor receptor-like isoform X1
KO
K03176
neurotrophic tyrosine kinase receptor type 1 [EC:
2.7.10.1
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04010
MAPK signaling pathway
omm04020
Calcium signaling pathway
omm04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135522284
04020 Calcium signaling pathway
135522284
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
135522284
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
omm01001
]
135522284
Enzymes [BR:
omm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
135522284
Protein kinases [BR:
omm01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
135522284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
LRRCT_2
Ig_3
LRR_8
ig
Ig_2
TrkA_TMD
LRR_5
C2-set_2
Atypical_Card
C2-set_3
CFC
Motif
Other DBs
NCBI-GeneID:
135522284
NCBI-ProteinID:
XP_064804460
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All DBs
Position
30:19857150..19885281
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AA seq
808 aa
AA seq
DB search
MAVVVGSAPWVAPMALVLLAITLAVPALGGCPSACRCSFAMLQCLEPNGIATIPALALQE
SENVTEIYIENQADLENITEVDLANYRELKNLTVTFCRLAYISANAFQHNIKLQYVNLAS
NSLEHISWKVFHFLPLLNLVLRDNPLECSCDIHWLQQWQLNDHSDLDNQPLQCFSNGHAL
QLDSLEMENCTVPDVAIVHANTKVQEGGNLTFVCQVTGVPMPVVRWRTNKLLSRYTVQER
FWGSTLELELQLWNMSSEDNLHNLTCEAENRAGPGEEKVTLDIEFPSKIIFLHNAEQQHH
WCFPFKVDGNPEPTIRWLFNGSDLTEGRYTYTQFIPDSDDGSVKHGCLFLNKPTHLNNGL
YTIIVGNRLGVDQATATGKFMDNPFDPFDPEGIIPVLEESDPLPTNKSNEDVTENTESRM
FGVSVAVGLAVFACAFLLMMVLVINKCGQQSKFGIHRSSVLGTEDDLAVSLRFMNFGTSP
PSSDDSGMSSFVENPQYFCGIFKDKDMCVQHIKRQDVVLKWELGEGAFGKVYLAECANLS
PDSDKMLVAIKTLKDANESTRQDFQREAELLTVLQHQNIVRFYGVCTDGEPLAMVFEYMR
HGDLNRFLRAHGPDAHILEEVKMPPLGQLTLPQMLHIAAQIASGMVYLASLHFVHRDLAT
RNCLVGDMGEGLMVKIGDFGMSRDIYSTDYYRVKVGGRTMLPIRWMPPESIMYRKFTTES
DIWSFGVVLWEIFTYGKQPWYQLSNSEAIECITQGRELERPRTCPKEVHGLMQGCWQREP
QQRLVIKDIHSRLLALVKSPPIYLDILG
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggttgtgggttccgctccatgggtagccccaatggctctggtactactggca
atcaccctggcagtaccagccctgggagggtgcccatccgcctgccggtgctccttcgcc
atgctgcagtgcctggagcccaatggcattgccactatacccgcgttggcactacaggag
agcgagaacgtcacggaaatttacatcgaaaatcaagccgacctggagaacattacagaa
gtagaccttgccaattatagagagttgaagaatctcacggtcacgttctgcaggctggcg
tacatctcggctaatgctttccaacacaacatcaagctccaatatgtaaacctggcatct
aactccctggagcatatcagttggaaggtgttccattttcttcccctgctcaacctggtt
ttgagggacaacccccttgaatgctcctgtgatatccattggctgcagcaatggcagctt
aacgaccacagtgacctcgacaaccaaccgctacaatgcttctcaaatggccatgcccta
cagttagactccttagagatggagaattgcactgtaccggatgtcgccattgtccatgcc
aacaccaaggtccaggagggaggcaacctgacatttgtgtgtcaggtgacaggagtgccc
atgcctgtagtgaggtggcgcacgaataaactgctgtctcgctatactgtacaggagagg
ttctggggctccacgttggagctggagctgcagctgtggaatatgtcctcagaagacaac
ctgcacaacttgacctgtgaggcagagaaccgggccgggcctggggaagagaaagtgacg
ttggacattgaatttccatccaaaatcatattcctgcacaacgctgagcaacagcaccac
tggtgtttcccctttaaggtggacgggaaccctgagccaaccatccgctggcttttcaac
ggctccgacctgaccgagggtcgttacacctacacacagttcattcccgactcggacgac
ggctctgtgaagcacggttgtctatttctcaacaagcccacccacttgaacaatggcctc
tacaccatcattgtggggaacagactgggcgtggatcaagccacggccacgggaaagttc
atggacaacccctttgacccctttgatcctgagggcatcatcccagtccttgaagaaagt
gatccacttcccaccaacaaatctaatgaggatgtcactgagaacacggagagcagaatg
tttggggtgtcagtggcagtgggtttggctgtgtttgcttgcgccttcctccttatgatg
gtactggtcatcaacaagtgcggccagcagtccaagtttggtattcaccgttcatctgtc
ttgggaacagaggatgatcttgctgtgtcactgcgtttcatgaactttgggaccagccct
ccttcctctgacgactctggcatgtccagctttgtggagaaccctcagtacttctgtggc
atcttcaaagacaaagacatgtgtgtgcaacacatcaaaagacaggatgtagttctgaag
tgggaattgggtgagggggcttttggcaaagtctacctggcagagtgtgccaacctcagt
ccggacagtgacaaaatgctggtggccatcaagactctgaaggatgccaacgagtcgacc
cggcaggacttccagagagaggctgagctgctcacagtgctccagcaccagaacattgtt
cgcttctatggagtgtgtacagatggagagccactggcgatggtgtttgaatacatgaga
catggagacctcaaccgcttcctcagggcgcacggtccagatgcccatatcctggaagag
gtgaagatgcccccgttgggccagctcactcttccccagatgctgcacatcgccgcccag
atcgcttcgggcatggtctacctggcctcccttcacttcgtgcaccgggacctcgccaca
cgcaactgcctggtgggagatatgggagagggtctgatggtcaagataggagactttggc
atgtcccgggacatctacagcacagactactacagggtaaaggtgggtgggcgtacgatg
cttcctattcgctggatgcctccggagagcatcatgtacaggaagttcaccacggagagt
gatatctggagctttggagtggtcctctgggagatcttcacctatgggaaacagccctgg
taccagctctccaacagtgaggctatcgagtgcattacacagggccgggagctggagaga
ccacgcacttgccccaaagaggtgcatggcctgatgcagggctgctggcaaagggagccc
cagcagaggctggtcatcaaggacatccacagccgcctccttgcccttgtcaagagcccc
cctatctacctggacatcctggggtag
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