Oncorhynchus masou masou (cherry salmon): 135522412
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Entry
135522412 CDS
T10723
Name
(RefSeq) glutamate receptor ionotropic, kainate 3-like isoform X1
KO
K05203
glutamate receptor, ionotropic kainate 3
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04080
Neuroactive ligand-receptor interaction
omm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
135522412
04082 Neuroactive ligand signaling
135522412
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omm04040
]
135522412
Ion channels [BR:
omm04040
]
Ligand-gated channels
Glutamate (ionotropic)
135522412
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Paralog
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
135522412
NCBI-ProteinID:
XP_064804705
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All DBs
Position
30:complement(24881834..24996213)
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AA seq
985 aa
AA seq
DB search
MRNTLLSARSSIVEYWTSAILCLFWIQYSCGMPHVIRIGGIFEQTEGPVPLVSPEELAFK
FAVNNINRNRTLLPNTTLTYDIQRINIYDSFEASRKACDQLSLGVVAIFGPSHSSSSNAV
QSICNALEVPHIQVRWKHHPMDNRDTFYANLYPDYSSLSYGILDLVQFLKWKTATVVYDD
STGLIRLQELIMAPSRYNIRLKIRQLPLDGEDTRPLLKEMKRGREFRIIFDCSHEMAAQI
LKQAQTMGMMTEYYHYIFTTLDLMAIDLEPYRFCGVNMTGFRILNVDNPQVASIVEKWSQ
ERQIPPKPDSGLLEGIMTTDAALTYDAVHIVSVSYQHAPQMTVNSLQCHRHKPWRFGGRF
MNFIKESHWEGLTGRLSFNRTSGLRTDFDLDIISLKEEGLEKVGKWSASGGLNITEVPKR
KGMNITDSLANRSLVITTILEEPYVMLKKSDKALVGNERFEGFCIDLLKELASILGFTYE
IRLVPDGKYGSQDDKGQWNGMIKELMEHRADLAVAPLTITYLREKVVDFSKPFMSMGISI
LYRKPNTTNNGFFSFLNPMTPDIWVYILLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSD
VVENNFTLLNSFWFGVGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLT
VERMESPVDSADDIAKQTKIEYGVVKDSATMSFFKKSKVSTFEKMWAFMSSKQSTSLVKS
IEDGIQRVLKSDYALLMESTTIDYITQRNCNLTQVGGVIDSKGYGIGTPMGSPYRDKVTI
AILSILEDGRLHMLKEKWWSGSSCLDEERREKAGPMGIQNLGGIFIVLASGLVLSVFVAI
AEFIYKLRKTAKREQVFLQCHGGRDQTVVHLREACETQTPPPGPGHGQDGCSDQHAHVQR
PTTPGKGQHELQHWDDPRVPVTVCASQRKSLLGNVEGVIGPETWDNGIEGITRFTINHSD
IGTLTKHGTLTQHGTIKMAASATQV
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacactttgttgtctgcccggagttcgattgtggaatactggacatcggccatt
ctatgtctcttttggattcagtactcttgtgggatgcctcatgtcattcgaatagggggg
atttttgagcaaacagagggaccggtgccgctcgtcagcccagaggagcttgcgtttaaa
tttgcagtgaacaacatcaacagaaacaggactttattgcccaacacgacgttaacgtac
gacatacagaggattaatatctacgacagttttgaagcgtcgagaaaagcctgtgaccaa
ctgtctttaggtgtagtggcaatatttgggccctcacatagctcgtcctcaaacgccgtc
cagtccatctgcaatgcgttggaagtgccacacatccaagtgcgatggaaacatcaccct
atggacaacagggacacattttacgccaacctgtaccccgattactcttctctcagttac
ggcatcttagatttggtgcagttcctcaagtggaaaacagccaccgtcgtatacgatgac
agtacaggtcttattagactacaggaactgataatggccccctccaggtataacatcagg
ctaaagattcgccagctccctcttgacggagaggacaccaggcctctcctcaaggagatg
aagagaggacgggagtttcgcattatcttcgactgcagccacgaaatggctgcacagatc
cttaaacaggcccagacgatgggaatgatgacagagtactaccactatatcttcaccact
ctggacctcatggctatcgacctggagccctaccgtttctgtggcgtcaacatgaccggc
ttccgcatcctcaacgtggacaacccccaggtggcgtccatcgttgagaagtggtcccaa
gagaggcagatacctcccaaacccgactcgggtctcctggaggggatcatgacgacagat
gctgctctgacgtacgacgcggtccacatcgtgtccgtctcctaccagcacgcgccacag
atgacggtcaactcgctgcagtgccaccgccacaagccatggaggtttggcgggcgcttc
atgaacttcatcaaagagtctcactgggaaggcctgacgggcaggctgtcgttcaacagg
accagtggcctccgcacagactttgacctggacatcatcagcctgaaagaggagggcctg
gagaaggtggggaagtggagtgcgtccggaggtctcaatatcaccgaggtgcccaagcgg
aaagggatgaacatcacagactcgctggccaaccgttccctggtcatcaccaccatcctg
gaggagccatatgtcatgcttaagaagtctgacaaggcgctggtgggcaacgaacgtttc
gagggattctgtatcgacctgctcaaggagctggccagcatcctgggcttcacctacgag
atccgcctggtgcctgatgggaagtacggatcgcaggacgacaagggccagtggaacggc
atgatcaaggagctgatggaacacagagccgacttggctgtggcccctcttaccattact
tacctgcgtgagaaggtcgtggacttctccaagcccttcatgagcatgggcatcagtatc
ctgtatcgcaagcccaacaccaccaacaacggcttcttctccttcctcaaccccatgacc
cctgacatctgggtctatatcctgctggcctacctaggcgtcagctgtgtcctcttcgtc
atcgctaggttcagtccatacgaatggtatgacgcccatccctgcaatcccggatccgat
gtggtagagaacaacttcaccctccttaacagcttctggttcggtgtgggctccctcatg
cagcaaggctctgagctgatgcccaaagctctgtccaccaggatcatcggaggcatctgg
tggttctttaccctcatcatcatctcctcctacacggccaacctggccgccttcctcacc
gtggagcgtatggagtcgcccgtggactctgccgacgacatcgccaagcagaccaagatt
gagtatggtgtggtcaaagacagtgccaccatgtcttttttcaagaaatcaaaggtgtct
acttttgagaagatgtgggcttttatgagtagtaaacagagtacgtcgctggtcaagtcc
attgaggacggcatccagagagttctgaagtctgactatgccttgctcatggagtccacc
acaattgattacattacccagcggaactgcaacctcacccaggttggaggcgtcattgac
agcaaaggctatggaataggcactccgatgggctctccataccgggacaaagtgaccatc
gccatcctgagcattctggaggatggccgtctgcacatgctcaaggagaagtggtggagc
ggcagcagctgtctggacgaagagcgccgtgagaaagccggccccatgggcattcagaat
ttgggagggatctttatagtactggcgtctggcctggttctctccgtctttgtggctata
gccgaattcatatacaagctaaggaagacggcgaaacgtgagcaggtctttctgcagtgc
catggtggacgagatcagacagtcgttcacctgcgggaggcgtgtgaaacacaaacacca
ccaccaggtcccggtcatggtcaagacggatgcagtgatcaacatgcacacgttcaacga
ccgacgactcccgggaaaggacaacatgagctgcaacactgggatgacccccgtgttccc
gtgacggtttgcgcctcccagagaaagagcctcctgggcaatgtggagggcgtgattggt
cccgaaacctgggacaatggaatcgaggggattaccagattcaccatcaaccacagcgac
atagggacactaacgaaacatggaacactaactcaacatggtactatcaaaatggcagca
tcggcgacacaggtatga
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