Oncorhynchus masou masou (cherry salmon): 135522510
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Entry
135522510 CDS
T10723
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135522510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135522510
03021 Transcription machinery [BR:
omm03021
]
135522510
03036 Chromosome and associated proteins [BR:
omm03036
]
135522510
Transcription factors [BR:
omm03000
]
Eukaryotic type
Helix-turn-helix
ARID
135522510
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135522510
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135522510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
135522510
NCBI-ProteinID:
XP_064804888
LinkDB
All DBs
Position
30:30400509..30431222
Genome browser
AA seq
2334 aa
AA seq
DB search
MAAQVASAATLNTSPPSELKKPDRDPNEDSILGEKQQENKQSGLERGSPGRGDLQDGADV
GNAGGGGEPEMKNGNGNPSRTINNQNDSIGSEGNNHPGMVHHHGSGFPPPSYGYSQHYGR
APFHQHGGQQSPGMAAAAGPAVQSSNMMDPYQPNSHDLGFSNHQFNNYNPFPNRTPYSGQ
GYGMNPSRNTQAPAAGGQPANVKQQPAGGPTAMAASYNNQRYNMGNPQPTSTPTLNQLLT
SPSSTRVYPNYPSSEYSNQEGASKGPTDTGSSGQYGGGNPGWQQRTHHPPPMSPGSTGQP
LGRSQPPGAMDPMAKMRGQPYVGGSPYSQQPGQGPPPGAQQGHAYPGQGYGPLTSQRYPV
AIQGRTPGAMGGMHYGQQMQSYGQQGPGGYGPPGQGPYYSQQGQASHPGQQQGPYPQAPA
GQQGGQTPYPQQPHPSQTSSSHAQGGPPYPQPHMPPQSQGPQPGPSQGPPQSQTPYSQGP
VQAQTQSGQPPYPQQQGPPSQPPQQASSQVPAGSQPQLSYPPTQGPQQLSTQQQQPQTPA
QPPQQPPGHSQHPQVQPASYSQNPPQQQQQQSQQSPYQRFPPPPQQEISQDSFSSQSSAP
PSNQPKSVSEDVSIQGRPSSLPVSPHPTCAKDLSGSIDDLPTGTDGALSPGVSTSGVSSS
QGEQSNLAQSPFSPHTSPHLPGIRGPSPSPAGSPASATTSRTGPLSPPTMPGTQIPPRPS
SVQSDGSVHPAMSQSPMAQDRGFMQRNPQMPPYSSPQSASPLSPRQSSGGQMHPGMGPYQ
QQNNSMGGYGPQGGQYGPQGYPRQPGYNNMPNANYPGMGNPMNPGNPMSGQGGLPFAGIP
PGRMPPGQVGVRPYGPNMGPNMPPNMGNMPPQVGSGMCPPPGLNRKAQEAAAVVMQHAAT
NSIHSRMPGYPNMPPGMMGPGAPYGPPMNNMPGMMNAQGGSPFPMGPNMANNSSGLAPSP
EFGMDGKINQGQKMNNKVDGTPKTEPTKSKKSSSSTTTNEKITRLYELGPELERKMWVDR
YLGFIEEKAMGMTNLPAVGRKPLDLFRLYVSVKEIGGFAQVNKNKKWRELSTNLNVGTSS
SAASSLKKQYIQCLYAFECKIERGEDPPPEIITDNKKANQAKVQPPSPAGSGSLQGPQTP
QSTSSSMAEGSDLKPPTPASTPHPTQMPPGARSNVALQDPFAEGSDPTFPRRNSMTSNSG
YQSGMSTPEMPGRMGPGPYEGPGPNKDPFGAMRKVGEQFLPASQGPNSGMAEQQQFNRGP
PPGAMGNMSMAQRQQYGPGPYGQGYERRPEQGMGPEGSMGSGAPQPNLMPANPDTGMYSP
NRYPSQQQPRNDSYGNQYPGHGTPPGGSYPNQQPGMYPQQQQNYKRPVEGGYPPAKRHEG
EMYSGPFSAGLQQQQPQQQPGVASAPPAGQPEMYQPQYSSGSFPGTDRRLPGPQGQFPFP
FNRERMQATTGPNAQPSMPPQMMQPSPDGPQGGAWQGRGEMNYPGNYPNRQGGPPGGSAQ
GPGHPGMNRGSEEIMSSEQRMNHEGQWGPGQMGPRQPPYVPGGTAPPMTRTLQSNYQSAQ
AMQNHIPQVSSPSPMPRGGPMESRTSPSKSPYMHSGVKMQKAGPPVPASHIVPQSVQSPL
IRRDMPFPPGSVEATHPILKPRRRLTTKDIGTPEAWRVMMSLKSGLLAESTWALDTINIL
LYDDNSISTFNLNLLPGLLELVVEYFRRCLIEIFGILREYEVGDPGQRTLLDPDALDRDW
SCTEDEESGVEDIEGEEDDDDEEEEVVVQHSKQSAGTTIEGQAPVKQEDEQESCSEQDTL
KEKDAEDEEKSFSNFEQPSSSSDPPALGPATPQERPKQASKFDKLPLKMVRKKDPFPAGR
PSQRGKVQEFDSGLLHWSAGGGDSTEHIQTHFERREEFLVPRERVLVVPTAKRKRLETEM
VGDKDNATPTEKDKQKGGGDQRPYQPSSTEKASTTTDTSADGKEGKSEHSDAETEETSQT
EEPQSQLENDKPSGPPHQQVPQRVVEDEPHSKDEGPLLTLANWQDALARRCVCVSNIVRS
LSFVPGNDQEMSKHPGLMLLLGRLVLLHHRHPERKQAPLTYEKEEESDDCLGQRDEWWWD
CLSLLRENCLVTLANISGQLDLSIYPESICLPLLDGLLHWAVCPSAEAQDPFPTLGPHSA
MSPQRLVLETLSKLSIQDNNVDLVLATPPLGRLEKLYGTLVRLVGERKVAVCREMSVVLL
ANLAQGDSMAARAIAVQKGSVGNLLGFLEDSLAATQLQQSQSSLLHLQGMHFEPTSNDMM
RRAARALHALAKVEENHSEFTLYESRLLDLSVSPLMNSVVSHVICDVLFLIGQS
NT seq
7005 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgccgccactctcaacacaagcccgccttccgaactaaag
aagccggatcgagacccaaatgaggattctatactgggggaaaagcagcaggaaaacaag
cagtcgggattagagcgcggatctccgggccggggggatctgcaggacggggccgatgtt
ggaaatgcagggggaggaggggaacctgagatgaagaacgggaacgggaacccgtccagg
actattaataatcagaatgattccatcggatccgaggggaataaccatcccgggatggta
caccaccatgggtccggttttcctccaccttcttatggatacagtcaacactacggccgg
gccccttttcatcaacatggcggacaacaaagccctggcatggcagctgctgcaggtcca
gccgtgcagtcgagcaatatgatggacccatatcaacccaattcgcacgaccttggcttt
tctaaccaccagtttaacaattacaatccattcccgaacagaactccctattctggccaa
ggatacggcatgaacccctcgcgtaatacccaggctccggctgctgggggacagccagcc
aacgttaagcagcaaccagcaggaggacccacagcaatggctgcatcttacaacaatcag
agatataatatggggaatccacagccaacatctaccccaaccctcaaccagctcctaacc
tctccaagctccacgcgggtatatccaaattacccatctagtgaatatagtaatcaggaa
ggagctagtaagggaccaacagacacgggcagtagcggtcagtatggaggggggaatccg
ggttggcaacaaaggacccatcatccgccgcctatgagccctggaagtacagggcaaccc
ctaggtagaagccagcccccaggtgcaatggatccgatggctaaaatgagaggccagccg
tatgttgggggcagtccatactcccaacagcctgggcaggggcctcccccaggagcccag
cagggtcatgcatacccgggccaaggctacggtccacttacctcccagagatacccggtg
gccattcagggccgcacccctggggctatgggaggcatgcattacgggcagcagatgcaa
tcttatggacagcagggaccaggaggctatgggcctccgggccaagggccctactacagc
caacagggccaggcttcacacccaggccagcagcaagggccctacccccaggcacctgca
ggacagcagggtggtcaaacaccctaccctcagcagccccacccttcccagacgtcatcc
tcacatgcccagggtgggccgccctatccgcagccccatatgcccccccagtcccagggc
ccgcagccaggtccatcccaagggcccccacagtctcaaactccctactcccagggccct
gtccaggctcagacccagtctggtcagcctccttacccccagcagcaggggcctcccagc
cagccaccacagcaagccagctcccaggtcccagcagggtcgcagccccagcttagctat
ccacccacgcagggcccacagcagctctccacacagcagcagcaaccccagacacccgct
caaccccctcagcaaccaccaggtcacagccagcatccacaggtccagcctgcatcctac
tcccagaatcctccacagcaacaacagcaacagtcacagcagtcaccttaccaacgcttc
cctcctccaccacagcaggagatatcccaggactcgttcagttcccagtctagcgcccct
ccctccaaccagcccaaaagtgtctcagaggacgtcagcatacaaggccggccgtccagc
ctaccggtgagtcctcacccaacctgtgcaaaggatctctcaggctccatcgatgacctg
cccacgggcacggatggcgctctgagtcctggcgtgagcacttcaggtgtgtcaagcagc
cagggtgagcagagcaacctggcccagtcgcccttctcgccccacacctctccccatctg
ccaggcatccgagggccctcgccgtcgcccgccggctcccctgccagtgccaccacctcc
cgcacgggacccctctcaccccccacaatgccagggacccagattccccctagaccatcg
agtgttcagtctgacgggagtgtgcaccccgccatgagccagtctcccatggcccaggac
agagggttcatgcagagaaacccccagatgcccccctacagctcaccacagtctgcctct
cccctgtcaccccgacagtcctctggaggccagatgcaccctgggatgggaccttatcag
cagcagaacaactccatggggggctacggacctcagggtgggcagtatggcccacaaggt
tatccccggcaacctggatacaacaacatgcccaatgccaactaccctggcatgggcaac
cccatgaaccctggcaaccccatgtctgggcaaggggggctgccatttgcaggcatccct
cctggtagaatgcctccgggccaggtgggagtgcgtccctatggccccaacatggggccc
aacatgccacccaacatgggtaacatgccacctcaggtgggctcagggatgtgccctccc
cccggcctcaaccggaaggcccaggaggctgcagctgtagtcatgcaacacgctgctacc
aactccatacacagcaggatgcctggctaccccaacatgccccctggcatgatgggccct
ggcgccccctatggccctcccatgaacaacatgcctggcatgatgaacgcgcagggcggc
tcacctttccctatggggcccaacatggccaataactccagtggtttggccccaagtcca
gagtttggtatggatggaaaaattaaccagggccagaagatgaacaacaaagtggacgga
acaccgaaaacggaaccgactaaatccaagaagtcgagctcttccacgacaaccaacgag
aagatcacccgtctgtacgagttgggccccgagctcgagaggaagatgtgggtggaccgc
tacctgggctttatcgaggaaaaagccatgggcatgaccaacctgcctgctgtgggccgc
aaacccctagacctcttcagactctacgtctcggtcaaggagattggaggcttcgcacag
gtgaacaagaacaagaagtggcgtgagctgtccaccaacctgaacgttggcacgtcaagc
agcgccgccagctccctgaagaagcagtacatccagtgtctgtacgccttcgagtgcaag
attgaacgcggggaggacccccctcctgagatcatcactgacaacaagaaggccaaccag
gccaaggtccagccaccctccccagctggatcaggttctctccagggccctcagaccccc
cagtccaccagcagctctatggccgagggcagcgacctcaagccccccacacctgcctcc
accccacaccccacccagatgccacccggggccaggagcaatgtggccctgcaggaccca
tttgctgaaggtagtgaccctactttccccagaaggaactccatgacctctaactctggc
taccagtctggcatgagcaccccagagatgccaggtcgcatgggtccagggccctatgag
ggtccagggcctaacaaagacccctttggtgccatgcggaaagttggggagcagttcttg
cctgccagtcagggtcctaacagtgggatggcagaacagcaacagtttaaccgtgggcct
ccaccaggtgctatggggaacatgtcgatggctcagagacagcagtatggaccaggccct
tacggacaaggctacgagaggaggccggagcaggggatgggcccagagggcagcatggga
tctggtgcaccgcagccaaacctgatgcccgctaaccccgacacagggatgtactcgcca
aaccgctacccatcacagcagcagccacggaatgattcctatggtaatcaatatcctggc
catggtactccccctggtggttcttatcccaatcaacagccaggaatgtacccacagcaa
caacagaactacaagcgtcctgtggaagggggctacccaccagcgaagcgacacgagggg
gagatgtacagcgggcccttcagtgcagggctgcagcagcaacaaccgcagcagcagcca
ggggtggcctctgcaccccctgctggccagccagagatgtaccaaccacagtacagcagc
ggctccttccccggcactgaccgccgcctgcctggtccccagggccagttccccttcccc
ttcaacagagagcgcatgcaggccaccactgggcccaacgcccagccctccatgcctcct
cagatgatgcagccaagccctgacggcccccagggtggcgcgtggcagggccgcggggag
atgaactatcctggcaattaccccaaccggcagggtggccccccagggggctcagcccag
ggacctggacaccccggcatgaaccgcggttcggaggaaattatgtcatcggagcaacgc
atgaaccacgagggccaatgggggccaggtcagatgggtcctcggcagcccccctacgtt
cctggagggacagccccgcccatgacccgcaccctccagtccaactaccaatccgctcag
gccatgcagaaccacattccacaggtgtccagtccctcccccatgccccgtgggggcccc
atggagagtcggacgtcgcccagtaaatctccctacatgcacagtggcgtcaagatgcaa
aaggcagggcccccggtccctgcctctcacatagtgccccagtctgtacagtcccctctg
atccgtagagatatgccctttcccccaggctcagtggaggccacccaccctatcctaaaa
ccacgccgacgcctcaccacgaaagatatcgggaccccagaggcttggagggtaatgatg
tccctcaagtctggactgttggctgagagcacgtgggccctcgacaccatcaacatcctc
ctgtatgacgacaacagcatctccaccttcaacctcaatttgctgcctggcctgctggag
ctggtggtggagtacttccggcgctgcctcatcgagatcttcggaatcctgcgcgagtac
gaggtgggcgaccccggccagaggactctactggaccctgacgccctggacagagactgg
agctgcacggaagatgaggaatcaggggtggaggacatagagggagaggaggatgacgac
gatgaggaagaagaggtggtggtgcaacattcaaaacagtcggccgggacgacaatcgag
ggacaggctccggtgaagcaagaggatgagcaggagtcgtgctcagaacaggacactctg
aaagagaaggacgctgaagatgaggagaagagcttctctaactttgagcagcccagctct
tcatcggacccccctgccctgggcccggctaccccccaggagagacccaaacaggctagc
aagttcgacaagctccccctgaagatggtacggaagaaggacccgtttccggcaggcagg
ccaagccagagaggaaaagtgcaggagtttgacagtgggctgctccactggagcgctggc
gggggagacagcacagaacacatccaaacccactttgagaggagggaggaatttctggtc
ccacgagaacgagtgctggtcgtcccaacagccaagaggaaaaggctagaaacagagatg
gtgggggacaaggacaatgctacccccacagagaaagataagcagaaaggtgggggagat
cagaggccctaccagccatcatccacagagaaggcctcaacaacaaccgacacctcagcc
gacggtaaggaggggaagtccgagcactcggacgctgagacagaggaaacgtcacagacg
gaagagccccagagccagctggagaacgacaaaccgagtggccctcctcatcaacaagtc
ccccagcgtgtggtggaggacgagcctcatagcaaggacgagggcccactgcttacactg
gccaactggcaggacgctctagcccgccgctgcgtctgcgtctccaacatcgtgcgcagc
ctctccttcgtgcctggcaatgaccaggagatgtccaaacaccctggcctcatgctgctg
ctgggtcgcctagtgctgctgcaccaccgccaccctgagaggaagcaggccccgctcacc
tacgaaaaggaggaggagtctgatgactgccttggccagagggacgaatggtggtgggac
tgcctgtcgctgttgagggagaactgcctggtcactcttgccaacatctctggccagctg
gacctctccatctaccccgagagcatctgccttccgctgctggacggtctcctccactgg
gccgtgtgcccttcggctgaggcccaggaccccttccccacgttggggccccacagcgca
atgtcaccccagagactggtcctggagactctcagcaagctgagcatccaagacaacaat
gtggacctggtcctagccacgccgccgttgggtcggttagagaagctgtatgggaccttg
gtgcggctggttggggagagaaaggtggccgtctgcagggagatgtcggtggtgttgttg
gccaacctggcccagggagacagcatggcagcgcgcgccattgccgtgcagaagggaagc
gtgggtaacctcctgggcttcttggaggacagcctggcggccacccagctacagcagagc
cagagctctctgctgcacctgcaggggatgcactttgagcccaccagtaatgacatgatg
cggcgggcagcccgggccctgcacgccttggccaaggtggaggagaaccactcagagttc
acactctacgagtcacgcctccttgacctctcagtgtcacctctcatgaactcggtggtg
tctcacgtcatctgcgatgtactctttctgattggccagtcatga
DBGET
integrated database retrieval system
