Oncorhynchus masou masou (cherry salmon): 135522543
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Entry
135522543 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: protein scribble homolog
KO
K16175
protein scribble
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
135522543
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PDZ
LRR_8
LRR_14
PDZ_6
LRR_4
PDZ_2
LRR_9
LRR_LRWD1
AbLIM_anchor
Motif
Other DBs
NCBI-GeneID:
135522543
NCBI-ProteinID:
XP_064804979
LinkDB
All DBs
Position
30:complement(32801296..32930232)
Genome browser
AA seq
1876 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCNLQNVPDEIFRYSRSLEELLLDANQLRELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKALEIADFSGNPLSKL
PDGFTQLRGLAHLALNDVSLQTLPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEHLD
LGSNELDVLPDTLGALPNLRELWLDRNQLSSLPLELGNLQRLVCLDVSENRLEELPSELS
GLLALTDLLLSHNLLEVVPDSIGSLKQLSILKVDQNRLTHLSDSIGECENLTELVLTENL
LQTLPRSLGKLKKLTNLNVDRNRLDNVPDELGGCASLNVLSLRDNRVAKLPAELADATEL
HVLDVAGNRLQNLPFALANLNLKAMWLAENQSQPMLKFQTEDDESTGEKVLTCYLLPQQP
SPSLENLLQNSVDDSWIDSNLNRVSVIQFQEETTKQDEDDEAAAERRGLQRRATPHPSEL
KVMKKVIEEKRNEAYISSPDGDPESPGTEEKRLSNLSNQSHDSAASNSTASANSHEERSC
VITTARESLVGGRGEQEEEELDEMEVEYVEPTVHFAEEPIYQGGNEDEEGGDGVPCSYLE
EQRPQFPTEKQRLIRKDTPHYKKHFKITKLPKPEAVAALLQGFSPDAHLTQHPTSHHPDP
EKEEEEEEECMVTPQRHNRIEEPKQEERSLLHVNSSLQPVKGVSFDQVNNLLIEPARIEE
EEHTLTILRQTGGLGISIAGGQGSTPYKGDDEGIFISRVSEEGPAAQAGVKVGDKLLEVN
GVVLQGAEHHTAVEALRSSGTAVSMSVLREHMVEPENAITTTPLRPEDDYFPRERRASGL
PFCIEAGSPAGFRHRLSACLVRNDKGLGFSIAGGKGSTAYRTGDMGIYISRIAEGGAAHR
DCTLRVGDRVITINGVDMTEARHDQAVALLTGTSPTIALLVERDQAEPGTPGGXPGLSRA
RAHSPPPPEPSDSPDQEEGNDDSSLLPHGNHLSQPPEDEYPIEEVALVKAGGPLGLSIVG
GSDHASHPFGINEPGVFISKVIPHGLACQSGLRVGDRILEVNTIDLRHATHQEAVKALLS
NKQEIRMLLRRDPSPPGMEEIVIQKQPGEKLGISIRGGAKGHAGNPFDATDEGIFISKVS
SSGAAARDGRLLVGMRILEVSNHSLLGMTHTEAVRVLRAVGDTLVMLVCDGFDPGNAATV
EASPGIIANPFAAGIVRKNSMESISSIDRDLSPEEMDILQKEVEMVRETSQWEREEMEKV
ERMRLEREEDTRLLEEETENLGTGPLKLDYRTLAALPTTALQKVNRAPSTEPPRTDSPIR
DAPYSPTTQPASIHFTPTALPAKEEISPLSPYETRPGAIQPPSRGGGRPITSPATPDGHS
SPNPFQHGPSPINSQTFDLFGQRNNVHHNQPSPEPELNNEVFEDEGDGGMGMGQAAPVSP
RPSLSSDCLDYMSLAAVPRLYRASMDMVVKTPSLGGRDDLAQRSFRDRQKYFEIDMKQQT
PDTKPKGRVSLVGADDLKKMREEEERRFEQRALEYLMDEDDEEEDDLVKQMGVLKATGKV
VLDGVEYKVEPVATPRRHCNTPPSYSATPPSYCGSSGPSSVDGKGDYQRNSLEESIKLEQ
QRPNSMTGLIPVYPGESGAPIRTAKAERRQQERLRMQSPELAPAGDKDLSPSEKRALEAE
KRAMWRAARPYGLEEDVRQYEQDLAKRLYQSRVRASQGTXATPQSQNAAASSAASQLRMK
SLEQDALKAQMVIAKSREGKKRGTLDQLAESPSPALTPSPTPLEDFSPQGVTSPGRLSLS
EKKFDYRQFAAIPSSKPVYDIQSPDVVDDIQFIDDGSSNPVHAADPTATSALEMALYSNT
RQLRQGCRSLETAVPT
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatccctttgtggcgttgtaaccgccacgtcgagtcggtggacaagcga
cattgtaatttgcaaaatgtccccgacgagatatttcgctacagccgcagtctggaggag
cttcttctcgacgctaaccaactccgagaactacccaagcctttcttcagacttctgaac
ttgcggaaactgggtctgagtgacaatgagatccagaggctccctcctgaggtggccaac
ttcatgcagctggtggagctcgacatctccagaaatgacattcctgagatccccgagagc
attaagttctgcaaggcattggagattgcagacttcagtggaaaccccctctccaagttg
cctgatggtttcactcagctcagagggctcgcccacctggcacttaacgacgtgtcattg
cagacactgcccaacgacataggaaacctggccaacctggtgacgctggagctcagggag
aacctgctcaagtccctgcccacgtcgctctctttcctggtgaaactggagcatctggac
ctgggcagcaatgaactggatgtgttgccggacacacttggtgctctccctaacctacgg
gagctgtggttggaccgcaaccagctctcctctttgccactagagctggggaacctgcag
agactcgtgtgtctagacgtgtcagagaaccgactggaggagttgccctcagagctcagc
ggcctgctggccctcactgacctgctgctctcacacaacctcctggaggtggtccccgac
agcataggctctctgaagcagctgtccatcctgaaagtggaccagaaccgactgacccac
ctgagtgactccataggagagtgtgagaacctgacggaactcgtactgaccgagaacctc
ttacagactctgcctcgctcgctgggcaagttgaaaaagctgaccaacttgaatgtggac
cgcaaccggctggacaacgtgcctgatgagctgggtggttgcgccagcctcaacgtgctc
tccctcagagacaatcgcgtggccaaattgcccgctgagctggctgacgccactgagctt
catgttctggatgtggcagggaacaggttacagaacctgccgtttgccctggccaacctc
aacctgaaggccatgtggctggcagagaaccagtcccagcccatgctcaagttccagacg
gaggacgacgagagcaccggggagaaggtgctcacctgctacctgttgccccagcagccc
tcccccagcctggagaacctgctgcagaacagtgtggacgacagctggatagacagcaac
ctgaaccgggtatccgttatccagttccaggaggagaccaccaagcaggatgaggacgat
gaggcggctgcagagcgcaggggtctccagcgccgggcgacgccccaccccagtgagctg
aaggtcatgaagaaggtgattgaggagaagaggaacgaggcctacatatccagtcctgat
ggagatccagagtctcctggtactgaggagaaacgactgagcaatctgtccaatcagagc
cacgactctgcggcgtccaacagcacagcctctgccaactctcatgaggagagatcgtgc
gtgattaccacagcgagggagagcctagtgggtgggcgtggtgaacaggaggaggaggag
ctagacgagatggaggtggagtatgtggagcccacggtgcactttgcagaggagcccata
taccagggtgggaatgaggacgaggagggtggggatggggtcccatgcagctacctagag
gaacagaggccccagttccctacggagaagcagcgtctgatcaggaaggacacgccgcac
tacaagaagcacttcaagattaccaagctgccaaaacccgaggcggtggccgcgttactg
cagggcttcagccccgacgcacacctgacccaacaccccacctcgcaccaccctgacccc
gagaaggaggaagaggaagaggaggagtgtatggttactccacagcgccacaacagaata
gaagagccaaagcaggaggagaggagtctgcttcatgtcaactcttccctgcagccggtc
aagggggtgtcatttgatcaagtcaataatctcctgattgagcctgctcgaattgaggag
gaagagcacaccctgaccattctacgtcaaactgggggcctgggcatcagcatagccgga
ggacagggatccacaccctacaagggggatgatgagggaattttcatctccagggtgtct
gaagagggccctgcagcgcaggctggggtcaaagtgggagacaaactcctagaggtgaac
ggtgtggttctccagggggcagagcaccacacggcggtagaggccctgcgtagctcgggc
accgccgtctccatgagcgtcctccgggagcacatggtggagccggagaacgccatcacc
accacaccgctaaggcccgaagacgactacttcccccgggagagacgggccagtggcctt
cccttctgcattgaggcaggctcccccgcaggcttccgacacaggctgtctgcctgcttg
gtccgcaatgacaagggtctgggcttcagcattgccgggggcaaaggctccacagcctac
cgcacgggggacatggggatctacatctcgcggatcgcagagggaggggcggcccacaga
gactgcacactccgagtaggggacagggtcatcaccatcaatggcgtagacatgaccgag
gccaggcatgaccaggcagtagcgctgcttaccggaacctctcccaccattgctctcctg
gtggagcgtgaccaggccgagccgggcaccccagggggcntcccgggcctgtcccgtgcc
cgcgcccactcccccccacctccagagccctctgactcacccgaccaggaagagggcaac
gacgactcgagcctcttgccccacgggaaccacctgagccagccgccggaggacgaatac
cccatcgaggaagtggcgttggtgaaagcgggcggccccctgggactgagcattgtggga
ggcagtgatcacgccagtcacccgttcggcatcaacgagcctggtgtcttcatctctaag
gtgatcccccatggcttggcgtgtcagagtgggctgcgggtgggggacaggatactggag
gtgaacaccatcgacctgcgccacgccacccaccaggaggctgttaaagccctgctctcc
aacaagcaggagatccgcatgctgctgcgcagggacccctcgcctcccgggatggaggag
atagtgatccagaagcagcctggagaaaagctgggcatcagcatccgcggcggtgccaag
ggccacgctggcaaccccttcgacgccaccgatgagggcattttcatatccaaggtgagc
tccagcggtgcagcggccagggatggccgtctgcttgtgggcatgcggatcttggaggtg
agtaaccacagcctgctgggcatgacccacacggaggctgtacgcgtgctccgcgccgtg
ggagacaccctggtcatgctggtgtgtgacggctttgaccctggcaacgctgccactgta
gaggcgtcaccgggcatcattgccaacccgtttgccgcaggcatcgtgcgtaagaacagc
atggagagcatctcctctatagaccgagacctgagtcccgaggagatggacatcctacag
aaggaggtggagatggtgcgagagacgtcccagtgggagagagaagagatggagaaggtg
gagcgcatgcgcttggagcgtgaggaggatactcgcctgctagaagaggagaccgagaac
ctgggcactgggcctctgaaactggactaccggacgctggccgcactgcccaccaccgct
ctccagaaggtcaacagggcgccctccactgagccccccaggacagacagtcctattaga
gacgccccctactcaccaaccacacaaccggcaagtattcatttcacccctactgcactg
cctgccaaggaggaaatctcaccactgagtccctatgagacaaggccaggtgccatccag
cccccctcccgtggtggcgggcggccgatcacctcgccagccactccggacgggcacagc
agccccaatcccttccagcatggcccctcccccatcaactctcagacctttgatctgttt
ggccagaggaacaacgtccaccacaatcagccttctccagagcctgagctgaacaacgag
gtgtttgaggatgagggggacgggggaatgggtatgggtcaggcagcccccgtctctccc
cgaccctccctctcctctgactgtctggactatatgagtctggcagcagtgccacgcctc
tacagagcctccatggacatggttgtaaagactccatcacttggtggcagagacgacctg
gcgcagcgctccttcagggacagacagaagtactttgaaatcgacatgaagcagcagacg
cccgacaccaagcccaaaggccgcgtgtccctggttggagcagacgacctgaagaagatg
agggaggaggaagagaggagattcgaacagcgggcattggagtacctgatggatgaagat
gacgaggaggaggatgacctggtgaagcagatgggagtgttgaaggccacgggcaaagtg
gtgctggacggggtggagtacaaggtggagcctgtagccaccccccgcaggcactgtaac
acgccccccagctacagcgccacaccccctagctactgtggcagctcagggccctcgtca
gtggatggtaaaggagactaccagaggaattccttagaggagagcatcaagctggagcag
cagaggcccaactccatgactggtctgatcccagtgtaccctggagagtcgggggctccc
atccggacagccaaggcagaacggaggcaacaggagcggctgaggatgcagagtccagag
ctggccccagctggagacaaggacctctccccctccgagaaacgggctctggaagccgag
aagagagccatgtggagggcagcaaggccctatggcctagaggaggatgttaggcagtat
gagcaggacctggctaagaggctctaccagtcgcgagtgagggcgtctcagggcaccngc
gccacccctcagtcccaaaacgccgccgcctcttccgctgcctcccagctcaggatgaag
tctctggagcaggatgctttgaaggctcagatggtcatcgctaagtcccgggagggaaag
aagcgtggcacactggaccagctggccgagtcgccctcgcccgccctcacaccatccccc
acccctctggaagatttcagtccacaaggagtaacgtcaccaggcagactgtccctgtcg
gaaaagaagtttgactaccgacagtttgctgccattccttcttccaaacccgtatacgac
atccagtctcctgacgtggtcgatgacattcagttcattgacgatggctccagtaaccca
gtgcatgctgcggatcccactgccacctcagcactggagatggccctctacagcaacacg
cgccagctgaggcagggctgccgcagcctggagactgccgtgcccacataa
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