Oncorhynchus masou masou (cherry salmon): 135522551
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Entry
135522551 CDS
T10723
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3-like isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135522551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omm03021
]
135522551
03036 Chromosome and associated proteins [BR:
omm03036
]
135522551
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135522551
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135522551
PBAF complex
135522551
GBAF(ncBAF) complex
135522551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
135522551
NCBI-ProteinID:
XP_064804990
LinkDB
All DBs
Position
30:complement(33256604..33320981)
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AA seq
553 aa
AA seq
DB search
MATEDTAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYSGSPTVRPGL
PTPVMEPSRKRPAPSQQNQQQQNVQNRARKKPVGFPGANEMPARQMDMRDAQSDPTLGSN
AKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKL
RLYISNTFNPAKPDADDSDGSIASWELRVEGKLLDDPGKLKRKFSSFFKSLVIELDKDLY
GPDNHLVELLTSKAKRFSLPKDNILKGSRARLLVESWHRTPTTQETDGFQVKRPGDVSVR
CTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDK
YFQQIFDCPRLKFSEIPQRLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLK
SQMSSFLLSTANQQEIASLDNKVGQPHRKDSQSQLPKMTLKIHETIESINQLKIQRDFML
SFSRDPKGYIQDWLKSQSRDLKMMTDVVGNPEEERRAAFYHEPWSQEAVSRYFYCKIQQR
RQELEQALAVRNT
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggctacggaggacacggcggggggagcgcgcaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcctggaatgccatctggagctaggatgccccaccagggt
gcccccatgggcccccccggccccccgtacagtgggagccctacggtgcggcccggcctg
cccaccccggtcatggagcccagccgcaagagacctgccccctcccagcagaaccagcag
cagcagaacgtacagaaccgggccagaaagaagccagtgggattccctggagccaatgag
atgccagcgaggcagatggacatgagagatgcccaatcagatccaacgctcggatcaaac
gccaagagaaggaaaatggcagacaagattctcccacagaggattcgtgagctggtccct
gagtcacaggcttacatggacctgctggccttcgaacgtaaactggaccagaccatcatg
cgtaaacgggtggacatccaggaagccctgaagagacccatgaagcaaaagcgtaaactg
aggctgtacatctccaacaccttcaaccctgccaagcccgacgctgacgactcggatggc
agtattgcatcatgggagctgcgggttgaggggaagctactagatgatcctgggaagctg
aaaaggaaattctcctctttcttcaagagcctggtgattgagctggacaaagacctatac
ggtcctgacaaccaccttgtagagctgctgaccagtaaagcgaagcgattcagccttcca
aaagacaacatactcaaagggtcgagagcaaggctgctcgttgaaagttggcaccgcact
cccaccacccaggagacggacggcttccaggtgaagcggccaggggacgtgagcgtgcgc
tgcacactgctgctcatgctggactaccagcccccccagtttaaactggaccctcgtctg
gctcggctgctgggtatccacactcagacccgctcctgtatcatccaggccctgtggcag
tatgtcaagaccaacaagctgcaggactcccatgacaaggagtacatcaactgtgacaag
tactttcagcagatctttgactgcccgaggctcaagttctcggagatccctcagcgtctc
accaacctcctcctgccccctgaccccatcgtcatcaaccacgtcatcagtgtggaccct
aatgaccagaagaagactgcatgctatgacattgacgtggaggtggaggaccccctgaag
agccagatgagcagcttcctgctctccaccgccaaccagcaggagatcgcctcattggac
aacaaggtgggacaaccacacaggaaggatagccaatcacaattacccaagatgacctta
aagatccatgagaccattgagtccatcaaccagttgaagatccagagggactttatgctc
agcttctccagggatcctaaaggctacatccaggactggctcaagtcccagagcagagac
ctgaagatgatgacagacgtggtggggaacccagaggaggagaggagggctgcgttttac
cacgagccctggtcccaggaggcagtcagtcgctacttctactgcaagatccagcagagg
agacaggagctggagcaggccttggccgtgaggaacacctaa
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