Oncorhynchus masou masou (cherry salmon): 135522553
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Entry
135522553 CDS
T10723
Name
(RefSeq) transcriptional repressor NF-X1-like
KO
K12236
transcriptional repressor NF-X1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135522553
04121 Ubiquitin system [BR:
omm04121
]
135522553
Transcription factors [BR:
omm03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
135522553
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
135522553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
135522553
NCBI-ProteinID:
XP_064805000
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All DBs
Position
30:complement(33322226..33354390)
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AA seq
1120 aa
AA seq
DB search
MAECSVKDSQDLNPDGPSSRQKQNQHQSRRGRARVDHNRTWSSPNNYVPLPQQQQDHFHH
GVKSSHDNVLVNFHPPPHHREDVQRGRGRGGNGSCGGGGRGSRGRNPRWNRPGVEIGIGP
LGLPGGHHGLVGGGYRPGTLHMERGPPIDGPSWRRDPGGRGGEVGPTHEDHQDTRPKKPR
RFSQEPRRGERSSKGHPHSLDKQENQENHATGGGGGGWDPVEPREETRSLEIGTRNRKGG
RTEDRNPHVDPRKKFQEPKRSQGPIKEYPQERKEPERGASGRDILPVHHDKLGPSTEEEP
NWRGQGKCTPLQDRGQRRTPKYDYRPGQRRGDNMPNKSKETQTGCLIEQLSEEKYECMVC
CEVIRVMAPVWSCLSCFHVFHLNCIKKWACSPASQADETNDGWRCPACQNVVFQPPNTYK
CFCGKVTNPEFQRSEIPHSCGDMCGKKRSGADCKHPCNILCHPGPCPQCPAFVTKACICG
RTSQPMRCGQATAIHCDKQCDLILNCTEHTCTQVCHNGLCQPCQLQVQQVCFCGVVYREV
LCGTDKDCFDGSGHFSCQKACGKMLDCEAHRCKQLCHRGPCQPCPRSPRLVRNCPCGQTA
LAKLLELGYPERRSCSDPIPSCGKKCNKPLPCGSNETIHICEKLCHEGCCGPCTLTSTIK
CRCGLKINDVPCATIQNEDGLIFTCEKRCLKKRSCGRHKCGELCCVGVEHTCSLVCGYKL
NCGLHRCQELCHRGNCQPCWQTSFDELACHCGGTVLFPPIACGTKPLECKNLCTRRHKCD
HQVFHNCHSEEKCPPCTYLTQKWCMGKHERRSNIPCHLQDISCGLTCNKVLLCDLHRCHR
ICHRGECLAKDACRQPCVLPRADCGHPCNAPCHKGTSCPRNTCAAKVALQCDCGRRKETV
VCTEAASAHQRYAAIAMASKLSDMQLGDSVDIGLITKKEMKQAKLECDEGCAALERNRRL
AVALQSYPSVDPFNIRTSSSTYSDSLRGDARKDLKFVSEVEEEIKNLVELASKGKLSKRS
HCFPPMNREHRKIVHELAEVYNVESVSYDSEPKRNVVITAIRGKSACPNSTLTSLIERDT
GVSRAPPPIAHIKHSKTDGVSSWSKAVKEEPAIDYFDVQD
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtgctcagtcaaagactctcaggatttgaatccagatgggccttcatcacga
cagaaacaaaaccaacaccagtccaggaggggtcgagccagagtggaccacaaccgtacc
tggagtagtcctaataattatgtcccactgccgcagcagcagcaagaccattttcaccat
ggggtcaaatcatctcatgacaatgtcctagtaaacttccatcctcctccccaccacaga
gaggatgtacagaggggtcgaggaagagggggtaatggaagttgtgggggaggtggccgg
ggctcaaggggccggaatccgaggtggaataggcctggggttgaaattggcattgggccc
cttggcttacctgggggccaccatggactggttggtggaggctacaggcctggaacactc
cacatggagaggggaccccccattgatgggcctagctggcgtcgagaccctgggggccgg
gggggagaggtggggcctacccacgaagaccaccaggacacccggcctaaaaagccccgg
aggttcagccaggagccacggagaggagagaggagctctaaaggacatcctcactctctg
gacaagcaggagaaccaggaaaaccatgctacaggaggagggggaggaggctgggatccg
gttgagcccagagaagaaacccgatcattagaaattggaaccagaaaccgtaaaggcggt
aggactgaggacaggaacccccatgttgaccctcgaaagaaattccaagagccaaagcga
agccaggggccgatcaaagaatatccccaggagaggaaggagcctgaaaggggagccagc
ggcagagacatcctccctgtccatcatgacaaactgggccccagcactgaagaagagccc
aactggaggggtcaggggaaatgcacccccctgcaggacagaggccagaggagaacaccc
aaatatgactacaggcctggacagaggaggggggacaacatgcccaacaagagcaaggag
acacagacaggttgcctgattgagcagctgtccgaggagaagtatgagtgcatggtgtgc
tgtgaggtgatcagggtgatggcacctgtctggagctgtctcagctgcttccatgtcttc
catctcaactgcatcaagaagtgggcctgctccccagcctcacaggcagacgaaacaaat
gatgggtggaggtgtccagcttgtcagaatgttgtcttccaacccccaaacacctacaag
tgcttctgtggcaaagtgaccaacccggagttccagcgtagcgagatcccacacagctgt
ggagatatgtgtgggaagaagaggagcggagcagactgcaagcacccctgtaacatcttg
tgtcaccccgggccttgtccacagtgtcctgcctttgtcaccaaagcctgcatctgtgga
agaaccagtcagccaatgcggtgtggccaggccactgccatccactgtgacaagcagtgt
gacttgatcctcaactgtaccgaacacacctgtacccaggtgtgccacaacggactgtgc
cagccgtgccaactacaggtccagcaggtgtgcttctgtggtgttgtctatcgggaggtg
ctgtgtgggacggataaagactgctttgacggctcaggacacttctcctgtcagaaagca
tgtggcaagatgttggactgtgaggcccaccgatgcaagcagttgtgccaccgtgggccg
tgccagccgtgcccacgctcccccagactggtgaggaattgcccctgtgggcagacggcc
ttggccaagctcctggagctgggctaccctgagcgccgcagctgctctgaccccatccct
tcctgtggcaagaaatgcaacaagcccctgccctgtggatccaacgagaccatccacatc
tgtgagaagctgtgccacgagggctgctgtggcccctgcacactcacctccaccatcaaa
tgcagatgtggtttgaagatcaatgatgttccctgtgcaaccatccagaatgaagatgga
ctgatttttacctgtgagaagcgctgcctcaagaagcgctcctgtggccgacacaaatgt
ggcgagctgtgctgtgtgggtgtggaacacacatgctctctggtctgtggctacaagctc
aactgtggcctccaccgctgccaagagctctgtcaccgtgggaactgccaaccctgctgg
caaaccagttttgatgagctggcgtgccactgtggggggactgtcctgttccccccaatc
gcctgtggcaccaagcccttagagtgtaagaacctgtgtaccaggaggcacaagtgtgac
caccaagtgttccataattgccacagtgaggagaagtgcccaccctgtacttacctcact
cagaagtggtgcatgggaaagcatgagcgaaggagcaacattccgtgccacctgcaggac
atctcctgtggtctgacctgcaacaaggtgctgctgtgtgacctccaccgctgccaccgc
atctgccaccggggagaatgtctggccaaggacgcctgccgccagccctgtgtgctgccc
cgtgccgactgtggccacccctgcaacgccccttgccacaagggcaccagttgcccgcgc
aacacctgcgctgccaaggtggcgctacagtgtgactgcggccggagaaaggaaacggta
gtgtgcacggaggcagccagtgcccatcagaggtatgcagccattgccatggccagtaag
ctgtctgacatgcagctgggtgactcggtagacatcggtctcatcactaagaaggagatg
aaacaggccaagttggagtgtgatgaagggtgtgctgcactggaaaggaacaggcgattg
gctgtggccctgcagagttacccttcagtggaccccttcaacatccgcacctcctcctcc
acttatagtgacagcctccgaggagatgccagaaaagatttgaagtttgtcagcgaggtt
gaagaggagatcaagaatctggttgagttggccagcaagggtaaactgtccaagaggagc
cactgcttccccccaatgaacagagagcacaggaagatagtccacgagctggctgaggtc
tacaacgtagagagcgtgagctacgacagcgagcccaaacgcaacgtggttattaccgcc
atcagggggaagtctgcctgtcctaactcaacactgacgtccctgatagagagagataca
ggggtctcaagggcacccccacccattgcccatatcaaacatagcaagactgatggtgtg
agcagctggtccaaggcagtcaaagaagagccggcaatcgactacttcgatgtccaggat
taa
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