Oncorhynchus masou masou (cherry salmon): 135522642
Help
Entry
135522642 CDS
T10723
Name
(RefSeq) integrin beta-1-like isoform X1
KO
K05719
integrin beta 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03271
Virion - Rotavirus
omm04145
Phagocytosis
omm04510
Focal adhesion
omm04512
ECM-receptor interaction
omm04514
Cell adhesion molecule (CAM) interaction
omm04517
IgSF CAM signaling
omm04518
Integrin signaling
omm04530
Tight junction
omm04810
Regulation of actin cytoskeleton
omm04820
Cytoskeleton in muscle cells
omm05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
135522642
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135522642
04514 Cell adhesion molecule (CAM) interaction
135522642
04517 IgSF CAM signaling
135522642
04518 Integrin signaling
135522642
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
135522642
09144 Cellular community - eukaryotes
04510 Focal adhesion
135522642
04530 Tight junction
135522642
09142 Cell motility
04820 Cytoskeleton in muscle cells
135522642
04810 Regulation of actin cytoskeleton
135522642
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
135522642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135522642
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omm04147
]
135522642
04515 Cell adhesion molecules [BR:
omm04515
]
135522642
04090 CD molecules [BR:
omm04090
]
135522642
Membrane trafficking [BR:
omm04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
135522642
Exosome [BR:
omm04147
]
Exosomal proteins
Proteins found in most exosomes
135522642
Cell adhesion molecules [BR:
omm04515
]
Integrins
Integrin beta subunits
135522642
CD molecules [BR:
omm04090
]
Proteins
135522642
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
135522642
NCBI-ProteinID:
XP_064805165
LinkDB
All DBs
Position
30:complement(43782123..43834999)
Genome browser
AA seq
770 aa
AA seq
DB search
MYVASEINHADKMDLKLLLISTLLGVICYSSAQQEGNECITANAKSCGECIQVGAKCGWC
MDPGFLTQGEATSTRCDELESLRKRGCSSTKVENPRGSQWALKNKALTNRNKGEGKLRPE
DITQVQPQKLTLSLRSGEPQSFNLKFKWAEDYPIDLYYLMDLSYSMKDDLENVKNLGTQL
MLEMSKITSDFRIGFGSFVEKKLLNPCTGDQNCTSPLIYKNILKLTSNGQEFNTLVGQQQ
IDGNLDSSEGGFDAIMQVAVCGDHIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGK
CHLENNMYTMSRHYVCMDYPSIAHLVQKLSDNNIQTIFAITEEFQPVYMELKNLIPKSAV
GILSANSSNVINLIIDAYNSLSSEVILENSKLPEGVTIMYQSRCKNGVTGEGEMGRKCSD
IFIGDEVSFTISITAKQCPKMGKPETIKIKPLGFNGEVEITLNFICECDCHKDGIENSEI
CLNGKGTYECGVCRCNEGRIGRQCECSTNEMTSEDLDKSCRKDSGADICSNNGDCVCGTC
ECKKRENPEERYSGMFCECDNFNCDRSNNKLCGGHGHCECRMCICDANWTGSACDCSLDT
TTCLASNKQICNGRGTCECGICKCTDPKFQGPSCEICPSCPGVCTEHKECVQCRAFGTGE
KKDTCERDCSYFNLIKVKDRDKMPQPGQAFPLMHCKERDANDCWFYYTYAVNKKSEKEVH
VVETLDCPAGPDIFPVVGWLGGGHRADRPGFASHLEAAHDHPRQERVRQV
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtatgttgcctcggaaataaatcacgctgataagatggacctgaaactacttctgatt
tcaacgttgttaggagtcatttgttacagcagtgctcagcaagaagggaacgagtgcatc
acggctaatgctaaatcctgtggggagtgcattcaagtgggagcgaaatgtggctggtgc
atggacccagggttcctgacgcagggtgaggccacatcgacccgctgtgacgagctggag
tccctgaggaagagaggttgtagctccaccaaggtagagaacccccgaggcagccaatgg
gccctgaagaacaaggctttgaccaaccgcaacaagggagaaggaaagctccgaccagag
gacatcacacaggtccagccacagaaactcaccctcagcctcagatcgggtgaaccccag
tcttttaacctgaagttcaaatgggccgaggattaccccattgacctctactacctgatg
gacctgtcctactccatgaaggacgatctggaaaacgtcaagaacctgggaacacagctc
atgctggagatgtcaaagatcacgtctgatttcagaattggttttggttcctttgtagag
aagaagttgctgaacccctgtactggggaccagaactgcaccagtcccttaatctacaag
aacatcctgaagctgaccagcaatggacaggaattcaataccctggtgggacaacagcag
atcgatggaaacctggactcatcagagggaggcttcgatgccatcatgcaagtggctgtg
tgtggtgaccacattggctggaggaacgtcacccgtctcctggtgttctccactgacgct
ggcttccactttgctggagacgggaaactgggagggatagttttgcccaacgatgggaaa
tgtcacctggagaacaacatgtacacaatgagccgccactatgtatgtatggactacccc
tccatcgctcacctggttcagaaacttagcgacaacaacatccagacgatctttgccatc
acagaggagttccagcctgtttacatggagttaaagaatctcattcctaaatctgcggtg
gggatactctctgctaactccagcaacgttatcaacctcattattgatgcctacaattct
ctttcctcagaggtgattctggagaacagcaagctaccagagggagtgaccataatgtac
cagtcacgctgcaagaacggagtgactggtgagggagagatgggaagaaaatgctccgat
atcttcatcggtgacgaggtgtctttcaccataagcatcacagctaagcagtgtcctaaa
atgggcaaaccagagaccatcaagatcaaacccctagggttcaatggggaggtggagatc
actctgaacttcatctgcgagtgtgactgtcacaaagatggcattgagaacagtgagatc
tgcctcaacggcaaagggacatatgaatgtggagtctgcaggtgcaatgagggccgtatt
ggtagacagtgtgagtgcagcaccaacgagatgaccagcgaagacctggataagagctgc
cgtaaagacagcggtgcagacatctgcagcaacaacggagactgtgtgtgtggaacctgt
gagtgcaagaagagagagaacccagaggagcgctacagcgggatgttctgcgagtgtgac
aacttcaactgtgaccgctccaacaacaaactctgtggaggacatggtcactgtgagtgc
aggatgtgtatatgtgatgccaactggacaggcagtgcctgtgactgttctctggacacc
acgacctgcctggcttccaacaagcagatctgtaacggacgaggcacctgtgagtgtggc
atctgcaagtgtactgacccaaagttccagggccccagctgtgagatctgtcctagctgt
ccaggggtctgcacagaacacaaggagtgtgttcagtgcagggcctttgggacgggggag
aagaaggacacgtgtgagagagactgtagctacttcaacctgatcaaggtgaaggacagg
gacaagatgcctcagccaggacaggccttccccctgatgcactgtaaggagagggatgcc
aacgactgctggttctactacacctacgctgtcaacaaaaagtcagagaaggaggtccat
gtggtggaaacactagactgccctgcgggccctgacatcttccccgttgtgggctggctt
ggtggcgggcatcgtgctgatcggcctggctttgcttctcatctggaagctgctcatgat
catccacgacaggagagagttcgccaagtttga
DBGET
integrated database retrieval system
