Oncorhynchus masou masou (cherry salmon): 135522644
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Entry
135522644 CDS
T10723
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04144
Endocytosis
omm04517
IgSF CAM signaling
omm04520
Adherens junction
omm04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
135522644
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135522644
09144 Cellular community - eukaryotes
04520 Adherens junction
135522644
04530 Tight junction
135522644
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omm01009
]
135522644
Protein phosphatases and associated proteins [BR:
omm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135522644
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
135522644
NCBI-ProteinID:
XP_064805169
LinkDB
All DBs
Position
30:complement(44152786..44733791)
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AA seq
1447 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGNGTIKVHSLIEQAAMRYKKAIAKDPGYWLQVHRLEHGDGGILD
LDDTLCDVADDKDRLVAVYEEQDPHHGGDGTSASSTGTQSPDPFTGVAELNSSNMSAFQP
YQTSSEIEVTPSALRSNMPLHVRRSSDPSMAGLPLGDPHTAPEEPSRKNPTRWSTTAGFR
KHNHQHSHSHSQNTGTNSLERKDVDAYRSLPRDSAVWATQFQRETARSSLSANHPMVDRW
LDRQDQEEEEEEERVKQEERNGRIEPVGRADSCVEHSPPLSLNDMLKLVEVSNVGGPLGI
HVVPFSATDRRTLGLLVKRLERGGKAEQEGLFQENDCVVKINNGDLRNIRFEQAQNMFRQ
AMRSPVILFHVVPASMKSQYEQLSQEELSPPCPRGERGNRGSFTSSQASDPQAPQPGERG
SLVVHGGVGLDHNPQRMSSRSRPHPIPIPNIKHQNHGPLPQRVPDQRFSTSLPHSGSNNV
SSAPSPSLQRRVSANPTAGYLKKTGRRLNIQLKKGPEGLGFSITSRDVPIGGSAPIYVKN
ILARGAAIQDGRLKAGDQLQEVNGVDLNGRSQEEVVALLRITPMGGTVSLLVLRQEDSYL
PREVKSEEEDLVLTPDGTREFLTFEIPLSDSGSAGLGVSVKGNRSKENHADLGIFVKSII
NGGAACKDGRLRVNDQLIAVNGESLLGTPNQDAMEMLRLSMSTEGNKRGMIQLIVARRVA
KSNEEVPGSSRVEEQPLTDPLDDHERHISHSMFGTRECLDDQTSMPSRNVMMGQRMMGNY
QLSPTVNMPQDDTVMIEDDRPPVIPAHMSDQSSSSSHDDMGFAADNPVTWAQDVPNQNEC
SLSPDTEDPEDSFQREGFGRQSMSEKRTKQFGDNANQLEIIKTRKSKSMDLVSDEFNPHL
TPSTENMEGSSTGETIGPSLGLKKSSSLESLQTAVAEVTLNGEINLHRPRPRIIRGRGCN
ESFRAAIDKSYDRPGVIVTAMEECDMKGMETLEEDTEGSSRSGRDSISTATDLTLPPGNS
VTMERQVNGNGDKKREKSVRDKKKPEREKEKEREKNKAKKGLLLKGLGDMFRFGKHRNGD
KMERKGSSKSKMEDTQASEEEMLRMKLEQERIQAKTREFRERQASVAREREYAEILDINP
NLNCTFSSNEDEEHPYAGIGSLDGSSEDSRQEPHQGPQPPQDSGPDQPDLEALYAQVNKP
RNGHPPSADSNRLAPSNHDRIRRLRVEFQQARGEEDPDDRRRTYSFEQPWANSETYTLTG
HQSVSVESQVQRPRQDKRRDSFTQAQRQYSSLPRQPRKTPSTVSQESCDKAFPPGEVFQT
AKENPRYSSYQGSRNGYLHGGASGFNARVLLETQELLRQEQRRREQSEAKMRLPPPQEGV
PVTNTSYDDIHPAPTPTLPQDPVLTQAPIPVTATPKGPYRQDVPPSPSQLARLNRLQGSE
KGHPFYS
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgacagtgtgttttgggagaaccagggtggtggttccttgtggcaatggaact
attaaagtccacagtcttatcgagcaagccgccatgagatataaaaaggctattgcgaag
gatcctggctactggctacaggtgcacaggttggagcatggggacggaggcatactggat
ctggacgacacactgtgcgatgtggccgatgacaaagacaggctggtggcagtgtatgag
gagcaggaccctcaccatggaggcgatggcaccagtgccagctcaacgggcacacagagc
cctgaccccttcactggcgtcgcagagctcaactccagcaacatgtccgccttccagccc
taccagacaagcagcgagatagaggttaccccctccgccctgcgcagcaacatgcctctc
catgttcggcgcagtagcgacccctcaatggcgggccttcccctgggtgacccacataca
gcaccggaggaaccatcccgtaagaaccccacacgatggtccaccacggcaggctttcgc
aagcacaaccaccaacacagccacagccacagccaaaacactgggaccaacagcctggaa
cgcaaggatgtagatgcgtaccggagtctccctcgtgattcagcagtttgggccacccag
ttccagagagagactgcccgctcctcactcagtgccaaccaccccatggtggaccgttgg
ctggacagacaggatcaggaggaggaggaggaagaggagagggtgaagcaggaagagagg
aatgggagaatagagccggtggggagagcagactcctgtgtggaacactccccaccgtta
tctctgaatgacatgctaaagctggtagaggtgtccaatgtcggcgggcctctggggatc
cacgttgtgcctttcagtgccacggacagaaggacccttgggttgttagtgaagcgtctg
gagcgcggcggcaaggcggagcaggaaggtctgttccaggagaacgactgtgtcgtcaag
attaataacggggatctgaggaacatccgatttgaacaagcccagaacatgttcaggcag
gccatgcgttctcctgtcattctgttccatgtggtcccagcctccatgaagagccagtat
gagcagctctcccaggaggagcttagccccccatgtccgaggggggagaggggtaaccgg
ggaagcttcacctccagccaggcctcggacccccaggccccacaacccggggaaaggggt
agtctggtggtccacgggggggtggggttggaccacaacccacagaggatgtcctccagg
tcaagaccacaccccattcccatccccaacatcaaacaccagaaccatggtcctctacca
cagcgtgtaccagaccagcgcttctccacctcgctacctcacagcggaagcaacaacgtc
tcctcggccccctctccatccctgcagaggagagttagtgccaaccctactgcaggctac
ctaaagaaaactggccggagactgaacatccagctgaagaaaggtcctgagggtcttgga
ttcagtatcacatcacgtgacgtccccataggaggctccgcccccatctatgtcaagaac
atcctggctcggggtgctgctatccaagatggccgcctgaaggctggcgaccagctgcaa
gaggtgaatggggtagacctgaatgggaggagtcaggaggaggtggtagctctactcagg
atcacccccatgggaggaacagtcagtctgctagtcctacgccaagaggactcctatcta
cctagagaagtgaagtcagaagaagaggacctggtgttgaccccagatggtaccagggag
ttcctgacctttgagatccctctgagtgactcggggtcggcaggtctgggggtcagcgtc
aagggaaaccgctccaaggagaaccacgccgacctgggcatctttgtcaagtccatcatc
aacggaggggccgcctgcaaggatggccgactgagagtcaacgaccagctgattgccgtc
aatggcgagtcgttgctagggacgcccaaccaggatgccatggaaatgcttcgcctatcc
atgtcgacggagggcaacaaacgagggatgatccaactcatcgttgccaggagggttgcc
aagagcaacgaggaggttccaggaagctcgagggtggaggagcagcctctgacagaccct
ctggacgaccatgagcgccacatctcccactccatgttcgggaccagagagtgcttggac
gaccagacctccatgccgtcacgcaatgtcatgatgggacagcgcatgatgggtaactac
cagctgtctccgactgtgaacatgccccaggacgacaccgtcatgatcgaagatgatagg
ccacctgtgatccccgcccacatgtctgaccaatcatcctccagctcccacgatgatatg
ggctttgctgcagataacccagtgacttgggctcaggacgtgccaaaccaaaatgagtgc
tccctcagtccggacacagaagacccagaagattcctttcagagggaggggtttggacgc
cagagcatgtcagagaaacgcaccaaacagtttggcgacaatgccaatcagcttgagatc
atcaagacgcgcaagtccaagagcatggacctagtatcagacgagtttaacccccacctc
acccccagcacagaaaacatggaaggctcttcaacaggagaaacaattggtccctctctg
ggcctgaagaagtccagctccctggagagcctccagactgccgttgccgaggttacactc
aacggggaaattaacctccacaggccacgcccacgaatcatcagggggcggggctgcaac
gagagcttccgggcagccattgacaaatcgtacgacaggccaggagtaatcgttactgct
atggaagagtgtgacatgaagggaatggagacattggaggaggacaccgaggggagttct
cggtcaggccgggactccatatctacggccactgacctgaccctgccacccggcaactct
gtaaccatggagaggcaggtgaatggcaacggtgataaaaagagggagaagagcgtgagg
gacaagaagaagcctgagagagagaaagaaaaagagagagaaaaaaacaaagccaagaaa
ggtttgctgctgaagggtctgggtgatatgttcaggtttgggaagcaccgcaatggagac
aagatggagcgtaaggggtcgagtaaatctaagatggaggacacacaggcgtctgaggag
gagatgctacggatgaaactggagcaggagaggattcaggcgaagacgagggagttccgt
gaacgtcaagcgtcggtggcgagggagagggagtacgctgagatcctggacatcaacccc
aacctgaactgcacattcagctccaatgaggacgaggagcacccctacgcaggcatcggc
tccctggacgggtcatccgaagacagcagacaggagccccaccaagggccccaacccccc
caggacagcggtccagaccagcccgacctggaagccctctatgcccaggtcaacaagcct
cgcaacggacaccctccctcagctgacagcaaccgactggcgccaagtaaccatgaccgg
atacggcgtctgagggttgagttccagcaggccagaggagaggaggaccctgatgaccga
cggcgcacatacagcttcgagcagccctgggctaactcggagacctataccctgaccgga
caccaatctgtttctgtggagtcacaggtgcagagaccgagacaagacaagagacgagac
tcatttacacaggcccaaagacagtacagttccctgccacggcaacctcgtaagaccccc
agcacagtgtcccaggagtcgtgtgacaaagccttcccgccgggcgaggtcttccagacg
gccaaggagaacccccgctactcaagctaccagggctccaggaacggctacctacacggc
ggggccagtggcttcaacgcccgcgtcctgctggagacccaggagctgctgaggcaggag
cagagacgcagggagcagtctgaggccaagatgagactaccgccgccacaggagggggtc
cctgtcaccaacaccagctacgatgacattcacccagccccgactccaacccttccccag
gatccagtcctgacccaggccccgatccctgtcacagccacacccaaggggccgtaccgc
caggatgtgcccccatctccatctcagctggccaggctcaacaggctgcaaggctcagag
aaaggacatccattttactcctga
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