Oncorhynchus masou masou (cherry salmon): 135522692
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Entry
135522692 CDS
T10723
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4-like
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135522692
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omm02000
]
135522692
Transporters [BR:
omm02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
135522692
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
AAA_22
AAA_23
AAA_15
Motif
Other DBs
NCBI-GeneID:
135522692
NCBI-ProteinID:
XP_064805274
LinkDB
All DBs
Position
30:48245560..48294920
Genome browser
AA seq
2314 aa
AA seq
DB search
MGTDSQVRLLLWKNWTLRKRQKMRFFMEIMWPVVLFIGLVWLRTANPLYRQHECHFPNKA
MPSTGILPWIQGIFCNANNPCFQYTTRGEGPGLVSNYNDSILARFYLDAQELLLSDPEFL
QLGRLWKELFTMSTFMDTLRTSPEQVSGRGLKVEDILKDDETLTSFLLRDVPLSEFVVNE
LVNAKIRPEQFVFGVPDLHLKDIACSQTLLEQFIIFPSRRGLYRVHSSICALTPQRLQTI
EDRLYANVDFFKLFRQLPRVLDNHSSGVDLHFWARVLSATYEKLRELSERNSSKALVEVM
SPLLQSQVGSPPSFRQLMGAVSSLVCGYMEGGFSRVASFNWYEDNNYKAFMGINDSTRGG
QGQYTYDHTATPFCNDLMKELESNPITRIMWSSVKPMMMGKILYAPDSPAVRKIIRNANT
TFEELERLRTMGRAWEEVGPQVWVFFQNSVQMNMIRDTIRNPTVRDYIDRSLQDTEFSSK
HILNFLYNGPIEDRDYDMANFDWRNVFNFTDQVIRMMNQYGECLILDKFSGLNDEEQMTH
RALSLMGESKFWAGLVFMDTYPWTTKVPPHVRFKIRMDIDSVERTNKIKDRYWDPGPRAD
PVDDLRYVWGGFAYLQDMIEHGIIRTQTGKDWPLGVYLQQMPYPCYVDDLFMLTLNRCFP
IFMVLAWVYSVSMTVKSIVLEKELRLKETLKTMGVTNGVLWVTWFIDSFLMMAASTSLLT
VIIMGGKVLNYSNPLILFLFLLTFTTATIMQCFLLSVFFNKANLAAACSGIIYFTLYLPH
ILCFAWQDRITKDDKIMASLMSQVAFGFGTEYLSRYEEQGLGLQWDNIQTSPLEGDEYSF
LTSISMMALDTVLYAVLAWYLDNVFPGQYGIGRPFYFPILPSYWLNSRPPKPKELEKPRF
DDLVNQAEEKQKTNHEPGDEQKTKAPDEELPSCKHQDKRERLGKGKTEEEEEEKNQEEKQ
NGEKEGQPSHAYFEGEPAGLVEGVCVQNLVKVFGRGQKPAVDGLSITFYESQITAFLGHN
GAGKTTTLSILTGMFPPTSGTASIYGKDIRTDMDTIRHSLGMCPQHNILFHHMTVEEHIL
FYSLLKGRSLSEAQLEVENMLEDLGLPHKRDEEAQNLSGGMQRKLSVAMAFVGGAKVVIL
DEPTSGVDPYSRRSIWDLLLKYRSGRTVILSTHHMDEADLLSDRVAIISQGRLHCCGSPL
FLKNCFGAGFYLTLVRRMKYEGPRTKMKCDCTDECSCKCSTCTTYKEESPQAKTPGRQMD
GDLSSITGLVHHHVPEARLIEAIGQELTYLLPNQGFQPRAYASLFRELEETLSDIGLSSF
GVSDTSLEEIFLKVTADGEAKSGKTTQEADGETQANRQENSGGSEGSEGRGSRQVKGVCL
VLKQLFALLIKRFHHATRSHKDFFAQIVLPASFVFVSLMFTTIVPPFGEYPSLTLSPWMY
GRQFTFFSNERILDPEMRYFGEVLLNKPGFGTRCMVDEPLEDFPCNNITTEWEMPLLNPA
LIDMLDGPEWTAVNPSPGCQCSTPRKLTMLPVCPEGAGGITPPQRIQSTGDVVVDLTGRN
ISDYLVKTYPSLIKASLKSKYWVNEQRYGGISVGGQLPVLDVDPKTIQDAASQLGRLLNV
TGGKYSKQTLKDIGTFLRYMESEYNVKVWYNNKGWHAMVAFMNVANNAILRANLPKDASL
DVYGITTINHPLNLTKEQLSEVTVLSTSVDAMVAICVVFAMSFVPASFVLYLIQERVTQA
KHLQFVSGVSPVIYWMANFLWDMVNYSISAALVVAIFMVFDKKCYTSPTNLQPLTALLML
YGWSVTPMMYPMSYIFSIPSTAYVSLSCINLFIGINSSAITFILDLFDSTAALYKCNQLL
KKMLLIFPHYCLGRGLIDMAMNQAVTDVYARFGEDFSLDPYSWDFVGKNLVFMAVEGFVY
FIINILIQYRFFLDHWITDCKTDPIMEEDVDVAQERERIYNGGSKNDILKIRDLTKTYMG
KTKPAVDRICVGVSPGECFGLLGVNGAGKTTTFKMLTGDTDVSSGEASVTGHSILTNILD
VHQNMGYCPQFDAIDDLLTGREHLHLYARLRGVPESEISKVADWAIQKLGLADYAGHTAG
TYSGGNKRKLSTAIAMIGCPPLVLLDEPTTGMDPHSRRFLWNSIMSVIQDGRAVVLTSHS
MEECEALCTRLAIMVNGTFQCLGTIQHLKYKFGDGYVVTMKIQASTPGCPPDLNPAEAFM
ESTFPGCVQREKHYNTLQYEIASSSLARIFQLVLANKDRLNIEDYTVSQTTLDQVFVNFA
KQQSGEDDGMVLHPRAAGARRKEIKVTPLSCLGK
NT seq
6945 nt
NT seq
+upstream
nt +downstream
nt
atgggtacggacagtcaagtccgattgctgctgtggaagaactggacccttcgcaagaga
cagaagatgcggttcttcatggagattatgtggccagtggttctgttcattggactagtg
tggctgaggacagctaaccctttataccgtcaacatgagtgtcactttcccaacaaggcc
atgccctcgactggcatccttccatggatccagggaatcttctgcaatgccaataaccca
tgcttccaatacaccaccaggggagagggccccgggctcgtctccaactacaatgattcc
atactggctcggttctacttggacgcccaggagcttcttctgagtgacccagagttcctg
cagctgggtcggctctggaaggaactgttcaccatgagcaccttcatggacaccctgcgg
accagcccagaacaggtctcaggtcgagggctgaaggtagaggacattctgaaggatgat
gagaccctgacatcctttctcctaagggatgttcctctgtcagagtttgtggtcaatgag
ctggtcaatgccaagatcaggcctgagcagtttgtgtttggcgtccctgacctccacctg
aaggacattgcctgcagtcagaccctgctggagcagttcatcatcttccccagccgcagg
gggctgtacagggtgcacagcagcatttgtgccctcacaccacagagactacagacaata
gaggacaggctctacgccaacgtggacttctttaaactcttccgtcagcttccccgggtg
ttggataaccactccagtggtgtcgacctacacttctgggccagagtactctctgccacc
tacgaaaagctgcgagagttgtcagagaggaacagctccaaagcgctggtggaggtgatg
tcccctctgctccagtcccaggtgggctctcccccatctttcagacagctgatgggggct
gtgtccagcctggtgtgtggctacatggaggggggcttctctcgggtggcctccttcaac
tggtatgaggacaacaactacaaggccttcatggggatcaacgatagcacccggggagga
cagggacagtacacctacgaccataccgccactccgttctgtaatgatctgatgaaggag
ctagagtccaatcccatcaccaggatcatgtggagctctgtcaagcccatgatgatgggg
aagatcctctacgcacccgactcgccagccgtcagaaagatcatcagaaacgccaacacc
acatttgaggagctggagaggctgaggaccatgggtcgggcctgggaggaggtgggccct
caggtctgggtcttcttccagaacagcgttcagatgaacatgatcagggataccatacgg
aatcccacggtgagggactacattgacaggagtctacaggacacagagttctcctcaaaa
cacatcctcaacttcctgtacaacgggccaatagaagacagggactacgacatggccaac
tttgattggaggaatgtcttcaacttcacagatcaagtcatccgtatgatgaaccagtat
ggagagtgtctgatcctggataaattctctgggctgaacgatgaggagcagatgacccac
agagctctgagtctgatgggggagagtaagttctgggctggcctggtcttcatggacacc
tacccctggaccaccaaggttccaccccacgtccggttcaagatccgcatggacatcgac
tcagtggagcgcaccaataagatcaaggacagatactgggaccctggtcccagggccgac
cctgtggatgatctccgttacgtgtggggggggtttgcctatctgcaggacatgatagag
catggcatcatcaggacccagacaggcaaggactggcccctcggtgtctacctacaacag
atgccgtacccatgctacgtggacgacctcttcatgctgacattgaaccgttgcttcccc
atcttcatggtgctggcgtgggtctactcagtgtctatgaccgtgaagagcatcgtcttg
gagaaggagctcaggctcaaagagaccctgaagaccatgggggtcaccaatggggttctg
tgggtcacatggttcatagacagcttcctcatgatggctgccagcacttccctgctcact
gtgatcattatgggtggtaaggtgttgaactacagcaaccctctgatcctgttcctgttt
ctgctaaccttcaccacggccaccatcatgcagtgtttcctactcagtgtcttctttaac
aaggccaacctggctgcagcctgcagcggtatcatctacttcaccctctacctgccccac
atcctctgctttgcatggcaggaccgcatcaccaaggatgacaagatcatggcgagcctg
atgtcccaggtggcgtttggctttgggacagagtacttgtcccgttatgaggagcagggt
ctgggtctgcagtgggacaacatccagaccagccctctggagggggatgagtactccttc
ctcacctccatctctatgatggccctggatactgtactctacgccgtccttgcctggtac
ctcgacaacgtcttcccagggcagtatggaattggtcggccattttatttccccatcctg
ccctcctattggctcaactctagacccccaaagccaaaagagttggagaaacccaggttt
gacgacctggtaaaccaggctgaagagaagcagaagaccaatcatgaaccaggtgacgag
cagaagactaaggcaccagatgaggagctgccatcctgcaaacaccaggacaaacgagag
aggctggggaaggggaaaacagaggaggaggaggaggagaagaaccaggaggaaaaacaa
aatggagaaaaagagggtcagcccagccatgcctactttgagggggaaccggcaggactg
gtggagggtgtgtgtgttcagaacctggtcaaggtgtttggtaggggacaaaaacctgcg
gtagacggactgagcatcaccttctatgagagccagatcactgctttcctggggcataat
ggagctgggaagaccaccaccttgtctatcctgacggggatgttccctcccacctctggg
acagcctccatctatgggaaggacatccggacagacatggacaccatcaggcactctctg
ggcatgtgtccccaacacaacatcctctttcaccatatgaccgtagaagaacacatcctg
ttctacagcctgctgaaggggaggtctctgtctgaggctcagctggaggtagagaacatg
ctggaggatctgggcctgccccacaagagagacgaggaggcacagaacctctcaggcggc
atgcaaaggaagttgtctgttgctatggcgtttgtgggcggtgccaaggtggtgattctg
gacgagcccacatcgggggtggacccctactccagacgatctatctgggacctactactc
aagtaccgatcaggacgtacagtgattctgtccactcaccacatggacgaggctgacctg
ttgagtgaccgtgtggccatcatctctcagggtcgtcttcactgctgcggctccccgctc
ttcctcaagaactgcttcggtgccgggttctacctcaccctggttcgacgaatgaaatac
gagggtcccaggaccaagatgaagtgtgactgtactgatgagtgttcgtgtaaatgctcc
acctgtaccacgtacaaagaagagtcacctcaagccaaaaccccgggcagacagatggac
ggtgacttgtcaagcatcacagggctggtccaccaccatgtcccagaggcccgtttgatc
gaggctatcggccaggagttgacctacctgctgcccaaccagggcttccagcccagggcc
tacgcctccctcttcagagagctggaggaaaccctctctgacatcggcctcagcagcttc
ggggtctccgacacatcactggaggagatattcctgaaagtgacagcggacggtgaagcc
aaatctggcaaaactacacaagaggcagacggggagacccaggccaacaggcaggagaat
tctgggggctcggagggcagcgaggggcggggctctagacaggtcaaaggtgtctgtctg
gtcctgaaacagttatttgccctgctcatcaaacggtttcaccacgccacaagatcacat
aaggacttctttgctcagatagttttgcccgccagttttgtgttcgtatcactgatgttc
actacgatcgtacctccgtttggagagtaccccagcctgacccttagtccctggatgtat
ggacgacagttcaccttcttcagtaacgagcgtatcctggaccctgagatgaggtacttt
ggagaggtgctgctgaacaagcctggctttgggactcgctgcatggtggatgaacctctg
gaggatttcccatgtaataacatcacaacggagtgggagatgccgctactgaaccctgct
ctgatagacatgttggatggaccagagtggaccgcagttaacccttccccaggctgccag
tgtagtacccctaggaaactcaccatgctgcctgtctgccctgagggagcaggggggata
acaccaccacagaggatccagtcgacaggtgatgttgtggtggacctaacaggcaggaat
atctctgattacctggtgaagacttacccctccctcatcaaggccagtttgaagagcaaa
tactgggtgaatgaacaaaggtatggaggtatatctgtcgggggacagcttcctgtgtta
gatgtggaccctaagaccatccaggacgcagcgtcacagctgggacgactgctcaatgtt
actgggggtaaatactccaaacaaactctgaaggacataggaaccttcctccgctacatg
gagagtgaatacaatgtcaaggtgtggtacaacaacaagggctggcatgccatggtggcc
ttcatgaacgtggccaacaacgccatcctcagagccaacctgcccaaagatgccagcctg
gatgtatacggcatcaccactatcaaccaccctctcaaccttaccaaggaacaattgtct
gaagtcactgttctgagcacctcagtggatgcgatggtggctatctgtgttgtcttcgcc
atgtcctttgtcccagcctcctttgtgctctacctcatccaggagagggtgacccaggcc
aaacacctccagttcgtcagcggggtcagtcccgtcatctactggatggccaacttcctc
tgggacatggtgaattactctatcagcgcagcactggtggtggctattttcatggtcttt
gacaagaagtgctacacgtcgccaaccaacctccaacccctgacagccctgctcatgctc
tatgggtggtctgtgacgcccatgatgtaccccatgtcctacatcttcagtattcccagc
acagcctacgtctctctgtcctgcatcaacctgttcattggcatcaacagcagtgccatc
accttcatccttgacctgtttgacagcacagcggcgctgtataagtgtaaccagctgctg
aagaaaatgctgctgatcttcccccactattgtcttggccggggtctgatcgacatggct
atgaatcaggctgttactgacgtctatgcccgctttggcgaggacttcagtctggacccc
tacagttgggactttgtagggaagaacctggtcttcatggctgttgagggctttgtctat
ttcatcataaacatcctgatccagtaccgcttcttcctggatcactggatcacagattgt
aagacggatcccatcatggaggaagacgtggatgtggcccaggagagagaacgcatttat
aatgggggaagcaagaatgacatcttaaagattagagacctcaccaagacatacatgggg
aagacaaagccagctgtggacaggatctgtgtgggagtgtcacctggggagtgctttggg
ctcctgggtgtgaacggagccgggaagaccaccacctttaaaatgctgaccggagacact
gatgtcagctcaggagaagcctctgtcactggtcacagcatccttaccaatatcctggac
gtgcaccagaacatgggctactgcccccagtttgatgccatagatgatctgctgactggc
agagagcacctccatctgtatgcccgcctcagaggggtgcctgagtccgagatcagcaag
gtggcagactgggcaattcagaagctgggtctggctgactatgctggccacacagccggg
acctacagcggcggcaacaagagaaaactatccacggccatcgccatgatcggctgtcct
cctctggtcctgctggacgagcccacgacaggcatggacccccactcacgtcgtttcctg
tggaactccataatgagtgtaatccaagatggccgagcagtggtcctcacctcacacagt
atggaggagtgtgaggctctgtgtacccgtctggctattatggtcaatggcaccttccag
tgtcttggtaccatccagcacctcaaatacaagtttggtgatggttacgtggtcaccatg
aagatccaggcctccacaccaggttgtcccccagacctgaacccagccgaggccttcatg
gagagcaccttccctggctgtgtccagagggagaaacactacaacactctgcagtatgaa
atcgcctcttcctccctggctaggatcttccagctggtcctggccaacaaggaccgcctc
aatatagaggactacaccgtctcccagacaacactagatcaggtgtttgtgaactttgcc
aagcagcagtcaggagaggacgacggcatggtgctgcacccgagggccgctggggcacgg
agaaaagaaatcaaggtcacacccctaagttgtctggggaaatga
DBGET
integrated database retrieval system
