Oncorhynchus masou masou (cherry salmon): 135522708
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Entry
135522708 CDS
T10723
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omm04040
]
135522708 (trpc1)
Ion channels [BR:
omm04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
135522708 (trpc1)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
135522708
NCBI-ProteinID:
XP_064805298
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Position
30:complement(49629244..49677726)
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AA seq
805 aa
AA seq
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MVKWSLAPSSGMHISVLPYSFSVAMAALYQVTDVSSPDKFLALKDVREVKEETTLDEKLF
LLACEKGDYYMVKRLLEEKTELNINCVDVLGRDAVTISIENQNLDILKLLLEHGCQATDA
LLVAIDSEVVGAVDILLNHHPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYE
ILTMLLKQDISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDP
ILRAFELSADLRELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHMANED
TVDKRGLMEERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGETASYRRKHTCLKMST
VLSVAVLWPLLSLCYLVVPRSRVGHIIHTPFVKFIIHSASYFTFLLLINLYSLVYNEGKK
NTMGPALEMIDYLLILWIIGMVWSDVKRLWYEGLEDFLDESRNQLSFVMNSLYLSTFALK
IVAHSKFKNVEDTERKNWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISVG
QMLQEFGKFLGLFLLVLISFTIGLTQLYGKDQKDPAKSPAKDCEGIFCQQQSNDAFHTFM
GTCYALFWYIFSLAHVALFVTRINYTEELRSFVGALIVGTYNIVVVIVLTKLLVAMLHKS
FRQIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNILPSPKTVCYLLTSMSKWICSHTST
GKVKRQNSLKEWRNLKRKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDL
SKFRNEMRDLLGFRTSKYAMFYPRS
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggttaaatggtcgctggcgcctagtagtgggatgcacatcagtgtccttccctactcc
ttctccgtcgcaatggccgctctatatcaggtcacggacgtgtcctctccggataaattt
ctggccctgaaagacgtgagggaggtgaaggaggagactactctggatgaaaagctcttc
ctactggcctgtgagaaaggtgactactacatggtgaagagactgctggaggagaagaca
gagctcaatatcaactgtgtagacgtgctggggagagacgctgtcaccatctctatagag
aaccaaaacctggacatccttaagcttctgctggagcacggctgccaggcaacagatgct
ctgttagtggccattgactcggaggtggtgggagctgtggatatccttctcaaccatcac
cccaggaggtcctcgaagccctccatcgctaaactgatgcagcgcatccagaaccccgag
tactccaccaccatggatgtggctccagtgatcctggcggcccataggaacaactatgag
atactgaccatgttgctgaagcaggatatctccctgcccaggcctcacgctgtgggctgc
gagtgtactctctgtaatgccaagaacaagaaggacagcctacgccactccaggtttcgt
ctggacatctacaggtgcctggccagcccgtctctgattatgctgaccgaggaggacccc
atcctcagggcctttgagctgagtgcagacctcagggagctcagcctggtcgaggtggag
ttcaggaatgactatgaggagctggctaagcagtgtaagatgtttgctaaggatctcctg
gcccaggcacgtaactccagagaactggaggtgatcctcaaccacatggccaatgaggac
acagtggacaagagaggcctgatggaggaacgcatgaacctcagccgcctcaaactagct
atcaagtacaaccagaaagagtttgtggcccagtccaactgccagcagttcctcaacacc
gtctggttcggcgagacggccagctaccggcgtaaacacacgtgtctgaagatgtccacg
gtactgagcgtggcggtgctgtggccgctgctctccctgtgctacctggtggtgccgcgc
tcccgcgtgggccatatcatccacacgcccttcgtcaagttcatcatacacagtgcctcc
tacttcaccttcctcctgctcatcaacctgtactctctggtgtacaacgagggcaagaag
aacaccatgggccctgccctggagatgatcgactacctgctcatactctggatcataggg
atggtgtggtcggacgtgaagcgtctatggtacgaaggcttggaggacttcctggatgag
tcgaggaatcagctgagcttcgtcatgaactctctctacctgtccaccttcgccctcaag
atagtggctcacagcaagtttaagaacgtggaggacacagagaggaaaaattgggatgcc
ttccaccccatccttgtggctgaggggctgtttgccttcgctaacgtcctgagctaccta
cgactgttcttcatgtacaccaccagctcaatactgggcccactgcagatctccgttggc
cagatgctgcaggagtttggtaagttcctgggtctgtttctgctggtgctcatctctttc
accatcggcctgacgcagctctacgggaaggatcagaaggacccggccaagagtcccgcc
aaagactgtgagggcatcttctgtcagcagcagagcaacgacgccttccacacgttcatg
ggaacgtgctacgcactgttctggtacatcttctctctggcccacgtggctctcttcgtg
acccggatcaactacacggaggagctgaggtcatttgtgggagccctcatcgtgggcacg
tacaacatcgtggtggtcatcgttctcaccaagctgctggtcgccatgctccacaagagc
ttcaggcagatcgctaaccacgaggataaggagtggaagtttgcccgcgccaagctgtgg
ctgagctactttgacgacaagtgtaccctgccgccgcccttcaacatcctaccctccccc
aagacagtgtgttaccttctgaccagtatgagtaaatggatctgctcccacacctccacg
gggaaggtcaagagacagaacagcctcaaggagtggagaaacctgaagcggaagcgtgat
gagaactaccagaagatcatgtgttgccttgtccatcgctacctgacgtccaccaggcag
aagatgcagagcaccgaccaggccaccgtagagaacctcaacgacctgcggcaggacctc
tccaagttccgcaatgagatgagagacctgctgggattcagaacctccaagtacgccatg
ttctacccccggagctaa
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