Oncorhynchus masou masou (cherry salmon): 135522739
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Entry
135522739 CDS
T10723
Name
(RefSeq) nucleoporin p58/p45-like isoform X1
KO
K14307
nucleoporin p58/p45
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135522739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135522739
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135522739
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
FapA
Nup49_C
PSY3
Tox-ODYAM1
JAKMIP_CC3
PBC
Motif
Other DBs
NCBI-GeneID:
135522739
NCBI-ProteinID:
XP_064805351
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All DBs
Position
30:complement(52157869..52169200)
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AA seq
594 aa
AA seq
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MSGFNFGSGSIGSTNAGGGFSFGAAASTPAAAGTGGFTLGGALGATAPASTTTTSSLGLG
GSLFSQKPTGGFSFNTPASGAPAASTAPTTGFSMTFNKPSASAQPFSLTAASSAPTGAGL
TLGSVLTSTAPQQGATGFSLNLGGVAASTAPSTGLSLGSSMFSNMATTGLSQSTLGGLGF
ALGLGQTTLGSGGLTLGSLASTSTAVSAAPSLGLGGVDFSTSSEKKSDKSSGASPQDSKA
LKDENLPPVICQDVDNFQKFVKEQKQVHEEISRMSSKAMLKVQDDIKSLKQLLSVSASGL
QRNALAIDKLKMETAQELKNADIALRTQKTPPGLQHDNTAPYDYFRCLVEQFEVQLQQYR
QQIEELENHLTTQGSGSHITPQDLSLAMQKLYQTFVALAAQLQSVHENVKTLKQQYLGYR
RAFLEDSTDVFESKRVASKKWQSAPRITTGPAPFSSIPNAAAVAMAATLSQQQQPGPGSQ
VSLGSGLGNPFALGVGSSLGTSGLGVFGGGPGFGGVATGGSSFGFSSASKPSGGSLSAGF
GSNSTSGFNFSSPGLNASAGLTFGVSNPPATGFGTGGPLLQLKKPPVGNKRGKR
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggctttaatttcggatccgggtctattggttccaccaacgctggcggagggttt
tcgtttggagccgctgccagtaccccagctgcagcaggtacaggtgggtttactctgggt
ggagctctgggtgctacagccccagcctccaccaccaccacctcttctctgggcctgggc
gggtcactattctcacaaaaacctactggggggttctcctttaacactcctgcctcaggt
gctccagcagcctctacagcccctaccacgggcttcagtatgaccttcaataaaccctct
gcctcggcccaacccttctccctcactgcagcctcctcagcccccacaggggcaggactg
acactaggctcagtcctcacctccactgcgccacagcaaggagccacaggattctctctc
aacctagggggtgtggctgcaagtacagccccatccacaggtctatcgctgggttccagt
atgttctctaacatggctactactggtctgagtcagtccactcttggaggactggggttt
gcgttaggtttgggccagaccactctcggatcaggggggttgacgttaggttccctggcc
tctacttccacggcggtgtcagcggcccccagccttggactgggaggagttgacttcagc
acctcctcagagaagaaaagcgacaaatcatcaggggccagcccacaagacagtaaagct
ttgaaagatgaaaatttgcctccagtcatctgtcaggatgtagacaacttccagaagttt
gtgaaggagcagaagcaggttcacgaggagatcagcaggatgtcatctaaagccatgctg
aaggttcaggacgacatcaagagtctcaaacagctgctgtctgtcagcgcttcgggacta
cagagaaacgccctggctatagacaaactgaagatggagactgcgcaggagttgaagaat
gcagatatagctctgcggactcagaagactccccctggactccagcacgacaacacagct
ccctatgattatttccggtgtttagtggaacagtttgaggttcagttgcagcagtacaga
cagcagatagaggaactggagaatcaccttactacacagggcagtggatcacacatcaca
ccacaggatctgtcactggccatgcagaagttgtaccagacgtttgtggctctggctgct
cagctccagtcagtacacgagaacgtcaagaccctgaagcagcagtacctgggataccgc
cgggccttcctggaggactccacggacgtcttcgagtccaagcgggtggccagcaagaag
tggcagagtgccccacgcatcaccactggccccgcccccttcagcagcatccccaatgcg
gcggcggtcgccatggcagccacgctgagccagcagcagcagcccggcccagggagccag
gtgtccctggggtctggcttgggaaacccctttgccttgggagtgggctctagcttgggc
acctcaggtctcggagtgtttggtgggggtccaggtttcgggggggtagcgacggggggc
tcctcatttggtttctcctctgccagcaagccctcgggagggagcctgagtgcaggtttt
ggaagcaacagtacttcagggtttaacttcagtagccccggcctcaacgcgtctgcaggc
ctgacgtttggcgtgtccaaccctcccgccacgggcttcggcactggaggtccactgctg
cagctcaagaagcccccggtgggaaacaagaggggcaagagataa
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