KEGG   Oncorhynchus masou masou (cherry salmon): 135522910
Entry
135522910         CDS       T10723                                 
Name
(RefSeq) flap endonuclease 1 isoform X1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Pathway
omm03030  DNA replication
omm03410  Base excision repair
omm03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:omm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    135522910
   03410 Base excision repair
    135522910
   03450 Non-homologous end-joining
    135522910
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:omm03032]
    135522910
   03400 DNA repair and recombination proteins [BR:omm03400]
    135522910
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omm04147]
    135522910
DNA replication proteins [BR:omm03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    135522910
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     135522910
DNA repair and recombination proteins [BR:omm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     135522910
Exosome [BR:omm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   135522910
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc HHH_5
Other DBs
NCBI-GeneID: 135522910
NCBI-ProteinID: XP_064805673
LinkDB
Position
30:61896435..61901573
AA seq 418 aa
MPGFGFRAKLRHCLRARSSGLREVSRREHSVSRRAHSTMGIHGLAKLIADQAPSAIKEQD
IKNYFGRKIAIDASMCMYQFLVAVRQDGNVLQNEDGETTSHLMGMFYRTIRMLEHGIKPV
YVFDGKPPQLKSGELEKRGERRAEAEKLLAQAQEAGEQENIDKFSKRLVKVTRQHNDECK
KLLTLMGVPYIEAPCEAEASCAALVKAGKVFATATEDMDGLTFGTGVLLRHLTASEAKKL
PIQEFLFSRLLQDINLTHEQFIDLCILLGCDYCGTIKGIGPKRAIDLIRQHGSIEEILEN
IDPSKHPAPEDWLYKEARGLFLQPDVVDCSTIDLKWSEPNEDALIQFMCAEKQFSEDRIK
NGCKKILKSRQGSTQGRLDTFFTITGSLSSKRKEPETKGSNKKKQKTGATPGKFKKGK
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgcctggatttggatttcgcgcgaaattgaggcattgtcttcgcgcccgaagcagtgga
ctccgggaagtatcacgacgagaacattcggtgagtcgcagagcacattccaccatggga
attcacgggcttgcaaagttgattgcagaccaggcaccatctgctataaaagaacaagac
atcaagaactactttgggcggaagatcgcaatagacgcctccatgtgtatgtatcagttc
cttgtcgctgtcagacaggatggtaatgtgctacaaaacgaggatggagagaccacaagc
catctcatgggcatgttctaccggactatccgcatgctggagcacggcatcaagcctgtc
tatgtgtttgatggcaagcccccacagctgaagtcaggagagctggagaagagaggagag
aggagggctgaagctgagaaactgctggcccaggcacaggaagcaggggagcaggagaac
attgataagttcagtaaacgtctggtgaaagtcacccggcaacacaacgacgaatgcaag
aagctgctcaccctgatgggggtgccatacatcgaggctccgtgtgaggctgaggcgagc
tgcgctgctctggttaaagctgggaaggtgtttgccactgcaacagaggatatggacggt
ctgacttttggaacaggggtcctactaaggcacctcactgccagcgaagccaaaaagctt
cctatccaagagttcctgttcagtcgccttctgcaggacattaatctgacccatgagcag
ttcatagacctgtgcatactgctgggctgtgactactgtggtactatcaagggaatcggg
cccaagagagccattgacttgatcagacaacacggctccatcgaggagattctggagaac
atcgacccgtctaagcaccctgccccagaggactggctgtataaggaagccagagggctg
ttcctgcagcctgacgtggtggactgctccaccatagacctcaagtggagcgagcctaac
gaggatgccctcatccagttcatgtgtgcagagaaacagttcagtgaggaccgcatcaag
aacggctgtaagaagattctgaagagccgacagggcagcacacagggacgactggacacc
ttcttcaccatcaccgggtctctgtcatcaaaacgcaaggaacctgagacaaagggatcc
aacaagaagaaacagaagaccggtgcaaccccaggcaaatttaagaagggcaaatag

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