Oncorhynchus masou masou (cherry salmon): 135522945
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Entry
135522945 CDS
T10723
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03018
RNA degradation
omm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135522945
09123 Folding, sorting and degradation
03018 RNA degradation
135522945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135522945
03041 Spliceosome [BR:
omm03041
]
135522945
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135522945
mRNA degradation factors
5'-3' decay
Lsm complex
135522945
Spliceosome [BR:
omm03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
135522945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
135522945
NCBI-ProteinID:
XP_064805739
LinkDB
All DBs
Position
30:complement(65146269..65150891)
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AA seq
91 aa
AA seq
DB search
MAATPATNPSQLLPLELVDKCIGSRIHIVMKNDKEIVGTLLGFDDFVNMVLEDVTEFEIT
PEGRRITKLDQILLNGNNITMLIPGGEGPEV
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcagccactccagctacaaatccgtcacagttgctcccacttgaactcgtggacaaa
tgtataggttcccgaatccatatcgtcatgaagaacgacaaagaaattgttggcaccctg
ttgggtttcgacgattttgtcaacatggtgctagaggacgtgacagaatttgaaatcaca
ccggagggaaggaggatcaccaaactggatcagatactgctcaacggcaacaacatcacc
atgctcatacctggaggtgaagggcccgaagtatga
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