KEGG   Oncorhynchus masou masou (cherry salmon): 135522985
Entry
135522985         CDS       T10723                                 
Name
(RefSeq) THO complex subunit 4-like
  KO
K12881  THO complex subunit 4
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Pathway
omm03013  Nucleocytoplasmic transport
omm03015  mRNA surveillance pathway
omm03040  Spliceosome
omm05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:omm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135522985
  09122 Translation
   03013 Nucleocytoplasmic transport
    135522985
   03015 mRNA surveillance pathway
    135522985
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    135522985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omm03019]
    135522985
   03041 Spliceosome [BR:omm03041]
    135522985
Messenger RNA biogenesis [BR:omm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     135522985
    TREX complex
     135522985
Spliceosome [BR:omm03041]
 Complex C
  Other components
   EJC/TREX
    135522985
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    135522985
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_10
Other DBs
NCBI-GeneID: 135522985
NCBI-ProteinID: XP_064805796
LinkDB
Position
4:9365137..9367976
AA seq 273 aa
MADKMDMSLDDIIQQSKKGGGGRGNRGGRSRGSSGRGVSGGRPGGAVSGGRTGGSGPMRS
RQNFSGDRSDSRPTPYSRPRELPDKWQHDMFEGGFGGNAGGGGGAGGGGVETGGKLLVSN
LDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSQGTADVHFERRADALKAMKQYNNVPLD
GRAMSIQHVTSQIRDDNQRRPSQSSNGGGGGFNRDRIGRPNFSERRGGGDRRGGRGSRGR
GRAGRGGGGKPQQLSAEELDAQLDAYNAKMETS
NT seq 822 nt   +upstreamnt  +downstreamnt
atggctgataagatggatatgtctttggatgacattattcaacaaagtaagaaaggtgga
ggtggccgcggaaatcgaggaggccgcagccgaggatcatcgggtcgaggtgtgagtgga
gggcgacccggtggcgctgtctctggaggccggacaggcggatccgggcccatgaggagt
cgacagaacttcagcggagacagaagcgacagcagacccacgccatacagcaggcccaga
gagcttccggacaaatggcaacacgacatgttcgaaggtggctttggcggtaatgctggt
ggtggcgggggagcaggcggtggtggtgtagagactggtggcaagctccttgtctcaaac
cttgacttcggtgtctctgacgctgatatccaggagttgtttgcggaatttggtacattg
aagaaagcggctgtgcactatgaccggtctggccgcagccagggaaccgccgatgtccac
tttgagaggagggctgatgcactcaaagccatgaaacagtacaacaatgtaccactcgat
ggccgcgccatgagcattcagcacgtcacatcccaaatcagagacgataaccagagacga
ccttcacagagttcaaacggaggtggtggtggattcaacagagaccgaatcggacgcccc
aatttctcagaaaggcggggaggcggagacaggcggggaggcagaggctccaggggcagg
ggtagagcgggacgtggtggtggaggcaaaccgcagcagttgtctgctgaagagctggat
gcccagttggatgcttacaatgccaagatggagaccagttag

DBGET integrated database retrieval system