Oncorhynchus masou masou (cherry salmon): 135523441
Help
Entry
135523441 CDS
T10723
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
omm03009
]
135523441
03036 Chromosome and associated proteins [BR:
omm03036
]
135523441
Enzymes [BR:
omm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135523441
Ribosome biogenesis [BR:
omm03009
]
Eukaryotic type
Pre-60S particles
Helicases
135523441
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
135523441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Gly_acyl_tr_C
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
135523441
NCBI-ProteinID:
XP_064806181
LinkDB
All DBs
Position
31:complement(12458813..12466276)
Genome browser
AA seq
750 aa
AA seq
DB search
MPSKIIFETEDIGMEGEMDISAGSTTPKKIKEKKTKEGKKIKKQKTVVEEEPDCEPPAPK
KKKKKKEKEDKTNGGAEVDVNSNAEESPLKDNTSHSNGESADNDKATEKKKKKKKEKKTD
EKVIVNGVLPETPTLIAQTNGHTAATTPAQSGEDSDSGKETETPEQKEGAFSNFRISPNT
IKLLQARGISYLFDIQTQTFNSVYEGKDVIGQARTGTGKTLAFAIPLIEKLQNDPDDKKR
GRAPKILCLAPTRELAIQVSKDFKDMTKKLSVTCFYGGSSYNPQLDAIRSGIDILVGTPG
RIKDHLQNNKLDLSQLKHVVLDEVDQMLDMGFAEQVEEILSASYQKDSETNPQTLLFSAT
CPSWVYDVAKRYMRPTYEHVDLIGKKTQKAATTVEHLAIACHWSQRAAVIGDVVQVYSGS
HGRTIVFCETKKDANELSMNASIKQSSQSLHGDIPQKQREITLKGFRSGTFEVLVATNVA
ARGLDIPEVDLVVQCSPPKDVESYIHRSGRTGRAGRTGVCICFYQRKEEDQLRYVEQKAG
ITFKRVGVPTANDIIKSSSKDAVRFLDSVPPQAIEYFRVSATKLIEERGAVEALSAALAH
ISGATALEQRSLLNSDTGYTTMTMNCSQELQNIGSAWRGLKEQLGEEIDNMIRGMTFLKG
KMGVCFDVPADKVKEYQDAWQDGRRWQLSIATELPELEEKPRMGGDRGYGRSFGGQGGGR
GFRNGGGGGGGGNWRGGGSHKRSFSSAFDY
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcaaagattatttttgaaaccgaagacatcgggatggaaggtgaaatggacatt
agtgcgggcagtacgacacccaaaaaaataaaggagaagaagaccaaggagggaaagaaa
atcaagaaacagaaaacggttgttgaagaggaacctgactgtgaacctcctgctcccaag
aagaagaagaagaagaaggaaaaagaggacaaaactaacgggggcgcagaagttgatgtt
aacagcaacgcagaagaatcacctttgaaggacaacacatctcattccaatggggagtct
gcagacaatgacaaagcaaccgagaagaagaagaagaagaaaaaggaaaaaaagacagat
gaaaaggtcatcgtcaacggagtgttgcctgagactcccacgctgattgcacaaactaat
gggcataccgcggcgacaactccagcacaatcaggcgaggactccgacagtggaaaagag
accgagacgccagaacaaaaagagggagccttctctaacttcagaatctcccccaacacc
attaaactacttcaagcaagaggcatatcttacctctttgacatccaaacacaaaccttc
aattctgtgtacgagggaaaggatgtgattggccaggcaagaacaggcactgggaaaact
ttagcttttgccattccgctgattgagaaactccaaaatgacccagatgacaagaagagg
ggcagagccccaaagattttgtgccttgctccaaccagagaattggctattcaagtatcc
aaggatttcaaggacatgacaaagaaactgtctgttacttgtttctatggtgggagctcc
tacaacccccaacttgatgcgatccgcagtggcatcgatatcctagtgggaactccaggt
cgtatcaaggaccatctacagaataacaaactggacctgtctcaattgaagcacgttgta
ttggatgaagtggaccaaatgcttgatatgggctttgcagaacaggtggaggagatactg
tctgcgtcttaccaaaaagactctgagaccaacccccagaccctgctcttctctgccaca
tgcccatcatgggtgtatgatgtggcaaagaggtacatgaggccaacctatgagcatgtg
gacctcattggcaaaaagacccagaaagctgccactacagtagagcaccttgccatagcg
tgtcactggtcccagagggctgcagtcattggggatgtggtgcaggtttacagcgggagc
cacggccgcaccatcgtcttctgtgagaccaagaaggatgccaacgagctgtcaatgaat
gcctccataaaacagagttcccagtcacttcatggggacatccctcagaagcagagggag
attacactgaaaggcttcagaagtggcaccttcgaggtcctagtggccaccaacgttgct
gcccgcgggttggacatcccagaggtagacctggtcgtgcagtgctcacccccaaaggat
gtggagtcctacattcatcggtcaggtcgaactggtcgggctggcagaactggtgtctgc
atctgtttctaccaacgcaaagaggaagaccagctccgatatgtagagcagaaagcaggc
attacatttaagcgggttggagtgcccactgccaatgacatcatcaaatcgtccagtaaa
gacgcagtgaggtttttagactctgtgcctccccaagccattgagtatttccgcgtgtct
gctaccaagctgattgaggagcgtggggccgtggaggccctgtctgctgccctggcacac
atatcaggagccactgccttggagcagaggtccctcctcaactctgacacgggctacacc
acaatgacaatgaactgctcccaggagctgcaaaacattggctccgcctggcgtggtctg
aaggagcaactgggagaggagattgacaatatgatccgggggatgaccttcctcaagggc
aaaatgggagtctgttttgatgtcccggctgacaaggtaaaggagtaccaggatgcctgg
caggatggtagacgttggcagctgtcaatcgccacagagcttcctgagctggaggagaaa
ccgcgcatgggtggtgaccgtggatatggacgttcctttggaggacagggaggtggccgt
ggcttcagaaacggcggaggaggcggcggcggcggcaactggagaggtggaggcagtcat
aaacgcagcttcagcagtgcgtttgattattaa
DBGET
integrated database retrieval system
