Oncorhynchus masou masou (cherry salmon): 135523524
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Entry
135523524 CDS
T10723
Symbol
srbd1
Name
(RefSeq) S1 RNA-binding domain-containing protein 1 isoform X1
Organism
omm Oncorhynchus masou masou (cherry salmon)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_N
Tex_central_region
HHH_9
S1
HHH_7
YqgF
PSD5
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
135523524
NCBI-ProteinID:
XP_064806343
LinkDB
All DBs
Position
31:19270278..19365381
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AA seq
1026 aa
AA seq
DB search
MQRRTRTVKVYTEKTTDGDSDELSPHTPSASEDEIEEWQPESKAPKRQQPSEKKPAVKRQ
AKPKEPKESKPKAPRKPVERKPRAPRAPKAPKPPKEPKPPKAPKPPKAPKPPKEPKPPKA
PRATKGGKKQQALLEEEAGGANQTNSIYDAAESQQSARVKKERLSFIVPDGSCNDNMSRA
GGGWSEGPSSSHQPYGGKKEEPEEDFAFDEPSLKRQKTSSAPQGRPTRLPTSGRAFGEDL
NMNWDLIQLLSERTGVEQWVCLNISQLFREENTIPFIVRYRKEMINHMDADAVRDVQLVL
EEIYGLAKKTQTISQTLKKEGVLTAELEQALRNCRTADELDHVYAPYKKGSKLSKARRAK
QLGLESAAQALLQSPHSLDLSAWVKPGTEGLSTLEEVSTGVEQILADMIAKDGETLTHIR
SLCDKNMVTLQSSVSKTALKEQQKEGHQGKPKDIDKFHLYCDFTCNVQRIQHHQTLAINR
GENLKILTVKVNIPDRVKSDFCTWCLNGRWRPKDSTREELIKILGDAVEDSYKRLLFPLL
SRSYRTKLTVSAEKESIAMFVRNLRQRLLVCPVRGRVIMGVDPGFRHGCKLAFLSPTSQI
LFTDVVYLHGSGGNREADKLRHLMIRYSCNTVVIGNGTACRETEAFFADLISRRFFQPLD
VSYCITSEAGASIYSVSPAAVKEMPDLDPNLRSAVSIGRRVQDPLAELVKIDPKHIGIGT
YQHDVSQSSLKAALDGVVQECVSFVGVDINICSETLMRHVAGLNTGRAKSIAEWRETNGP
FMNRDQLRLVKGLGPKSYQQCAGFIRINPLDHLNNHSDAAGGNSAQAAQEKPAAKGKGKT
KASAAVHTLPNPLDQTCIHPESYTVARSFLSLVGGSVDQMGRPELRQSVEASVKCQGLEA
LAKTLNTTPDTLQLIIDGLTQPPGFDIRQDFEKADFKRGIVSMSDLREGVVLTGRVENAA
LFGAFVDIGVGRNGLIHKRYITPDKLPADQRRRSLALGPGEKVEVRVLNVDHQRGRIGLD
LIRVLR
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgcaacggcgaactcgcacagttaaagtctacacggaaaagacaacagatggagattcc
gatgaacttagtccacacactccgtcagcgagtgaagatgagattgaagaatggcagcca
gaatccaaggcccccaagaggcagcagccaagtgagaagaaaccagcggtgaagaggcag
gctaaacctaaagagcccaaggaatccaaacccaaagccccacgcaaaccagtggagagg
aagccccgagctcccagagcccctaaagctcccaaaccccctaaagaacccaaaccccct
aaagctcccaaaccccctaaagctcccaaaccccctaaagaacccaaaccccctaaagct
cccagagcaacaaaaggaggtaaaaagcagcaagctctgttagaggaagaggctggagga
gccaatcagactaactccatctatgatgcagcggagtcacagcagtcagccagggtcaag
aaggagagactgtccttcattgtgcctgatggatcgtgcaacgacaacatgtccagagca
gggggcgggtggtccgaggggccgtcctccagccatcagccttatggggggaagaaggaa
gagcctgaggaggacttcgcgtttgatgagccttctctgaagagacagaagaccagcagt
gcccctcagggcaggcccaccagactgcccacctcaggaagagcctttggagaagacctg
aacatgaactgggaccttattcaattgctgtctgagaggacaggagtggagcaatgggtg
tgtttgaacatttcccagctcttcagagaggagaacaccattccctttatagtgcgctat
aggaaagagatgatcaaccacatggacgcagatgccgtgagggacgtgcagctggtgctg
gaggagatctatggactggcgaagaagacgcagactatcagtcagactcttaagaaggag
ggagtcctgactgctgagctggaacaggctctgaggaactgcaggaccgctgatgaactg
gaccacgtgtatgcaccctacaagaaaggcagcaagctgagcaaggcccgtcgtgccaag
cagctgggactggagtctgctgcccaggccctgctacagagtcctcacagtctggacctg
agtgcctgggtcaaacctgggactgaaggtttgtccactttggaggaggtgtcgaccgga
gtggagcagattttggctgatatgattgctaaagacggagagactctgacccatattaga
tcgctatgtgataaaaacatggtgacgctccagtcgtctgtgtctaagacagccctgaag
gagcagcagaaagagggtcaccaggggaagcccaaagacattgacaagttccacctgtac
tgtgacttcacctgcaacgtgcagcgtattcaacaccaccagaccctggccattaaccga
ggggagaatctgaagattctgacagtgaaggtcaacatccctgacagggtgaagagcgac
ttctgtacgtggtgtctcaacggcagatggagacccaaggattccactagagaggagctg
attaagatcttaggagacgcagtggaggactcgtacaaaagactcttattccccctgctc
agcagaagctacaggacgaagctgacggttagtgcggagaaggagtccatagccatgttt
gtgcgcaacttgcgccagcgtctgttggtgtgtcctgtgagaggccgtgtcatcatgggc
gtggacccagggttcagacatggctgtaaactggccttcctctcccctaccagtcagata
ttattcacagatgtggtgtacctccatggttcaggggggaacagagaggcagacaaactg
cgccatctgatgatcagatacagctgtaacacggtggttatcggcaacggcacagcctgt
cgagagactgaggccttctttgctgacctcatcagccgacgcttcttccagcctctggac
gtgtcatactgcatcaccagcgaggcaggggcatccatctacagtgtgagcccagcggca
gtgaaggaaatgcctgatctggacccgaacctgaggagtgcagtgtccatagggagacga
gttcaggacccgctggctgagctggtgaaaatcgacccgaaacacatcggcattggaacc
taccagcacgatgtgtcccagagctctctgaaggcagccctggacggggtggtgcaggag
tgtgtgagcttcgtgggagtggacatcaacatctgctcagagaccctgatgagacacgtg
gcaggtctgaatacagggcgtgcaaagagcatagcagagtggagggagacgaacgggccc
ttcatgaacagagatcagctgagactggtgaagggcctgggccctaagagctaccagcaa
tgtgccggcttcatcagaatcaaccctctcgaccatctcaacaaccacagtgatgcagca
gggggtaactcagcccaagcagcccaggagaagcctgcagctaaggggaagggaaagacc
aaagcttcagctgctgtacataccctgcccaaccctctggaccagacctgcatccaccca
gagtcctacactgtggccaggagtttcctgtccctggtagggggtagtgtggaccagatg
ggccggccagagctcagacagagtgtggaggccagtgtgaaatgtcaaggtctagaagcc
ctggctaaaaccctcaacaccaccccagacacactgcagctcatcatagacggactcacc
cagcctcctggctttgacatccgccaagacttcgagaaggcagacttcaagcgtggcatt
gtgtctatgagtgacctgagagagggggtggttctgacgggccgggtggaaaacgccgct
ctgttcggggcctttgtggacatcggagtgggccgcaacgggctgatccataagaggtac
atcaccccagacaagctgccagctgaccagaggagacgcagcctagccctaggccccggg
gagaaggtggaggtcagggtgcttaacgtggaccatcagcggggccgcattggactggac
ctcatacgggtcctcagatag
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