Oncorhynchus masou masou (cherry salmon): 135523621
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Entry
135523621 CDS
T10723
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1-like
KO
K17908
autophagy-related protein 18
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04136
Autophagy - other
omm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135523621
04136 Autophagy - other
135523621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135523621
03029 Mitochondrial biogenesis [BR:
omm03029
]
135523621
Membrane trafficking [BR:
omm04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
135523621
Mitochondrial biogenesis [BR:
omm03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
135523621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_MABP1-WDR62_2nd
WDR55
BCAS3_WD40
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
135523621
NCBI-ProteinID:
XP_064806486
LinkDB
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Position
31:24710534..24720554
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AA seq
445 aa
AA seq
DB search
MEDRETFDGRGGPQDLISSSFNQDTTSLSVGTKSGYRLFSVTSVDKMDCIHEGAESPDVY
IVERLFSSSLVVVVSLSMPRRMNVYHFKRGTEICNYSYSNNILSVRLNRQRMVVCLEESV
YIHNIKDMKLLKTLLNIPHNPSGLCALSVNHGNSYLAYPGSQTIGEIMVYDANNLSMVTM
IPAHDSPLAALAFNVSGTKLASASERGTVIRVFTIPEGERLFEFRRGMKRYVSISSLSFS
SDAQFLCASSNTETVHIFKLERHSPRREGECPTWGAYVGKMFTAASTYLPSQVSDMMHQD
RAFATVRLNMFGLKNICALATVQKLPRLLVASSDGHIYIYNIDTQEGGECVLVRKHRLFE
EDKEPQEEQREEEELEDRRSLPPPNSLSYAATVALPSTPPSSTTLTGYLDGGAKKGNVIP
EHEFTKGPVCLDDKNKFPPVNNQSN
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccgggagaccttcgacggtcgaggagggcctcaagatttgatcagctcctcg
ttcaaccaggacaccacgtctctatcagtgggcactaagtcaggctacagactcttctct
gtcacctcggtggacaagatggactgcatccatgaaggagcggagtctccagacgtgtac
atcgtggagcgtttgttctccagcagtctggtggtggtggtcagtctctccatgccccga
cgtatgaacgtctaccacttcaagagaggaacagagatctgcaactatagctactccaac
aacatcctctcagtcaggctcaacagacagaggatggtagtgtgtctggaggagtcggtc
tacatccacaacatcaaagacatgaagctgctcaagacactgcttaacataccacacaac
ccctcaggtctctgtgccctctctgtgaaccatggtaactcctacctggcgtaccctggc
agtcagaccatcggggagatcatggtttatgacgccaacaacctgagcatggtgacgatg
atcccagcccatgacagtccccttgcagctctcgcattcaacgtgtcaggaaccaaactg
gccagcgcctccgagaggggtacagtgattcgagtgttcaccatcccagagggagaaaga
ctgtttgagttccgcagagggatgaagaggtacgtgagtatcagctcattgtcctttagt
tcagacgcccagttcctctgtgcctccagcaacaccgaaactgtccatatcttcaaactg
gaacgtcacagccccagacgagagggggaatgtcctacgtggggtgcatacgtgggaaag
atgttcacagcagccagcacttaccttccctcccaggtctctgacatgatgcaccaggac
cgggccttcgccactgtacgacttaacatgttcggtctcaagaacatctgcgccttggcc
acggttcagaagctgcctcgtctgctggtggcgtcatcagatggacatatctacatctat
aacatcgacacacaggagggaggagagtgtgtgttggtcaggaaacatagactatttgaa
gaagataaggagccacaggaagaacaacgggaagaggaggagcttgaggatagaaggtcc
ctcccaccgccaaacagcttatcatacgctgccactgtggctctcccctcgaccccaccc
tcttctaccactctcacaggctacttagatggaggggctaagaaaggtaatgtgatccct
gagcatgagtttaccaagggacccgtctgtctggatgacaagaacaagtttcctccagtc
aacaaccagagcaactga
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