Oncorhynchus masou masou (cherry salmon): 135523652
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Entry
135523652 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup133-like
KO
K14300
nuclear pore complex protein Nup133
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135523652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135523652
03036 Chromosome and associated proteins [BR:
omm03036
]
135523652
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135523652
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
135523652
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
135523652
NCBI-ProteinID:
XP_064806538
LinkDB
All DBs
Position
4:complement(10361406..10373089)
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AA seq
1140 aa
AA seq
DB search
MFSPRSTPSSGRRQSSRVTGRKSLAGTPTGLLFSPRRTSLAARSTPTRVQSYSTSDALHF
DVQTFGSSLPVKVMEALTMADADDQISVKVDESGWAWMVCGERLIIWKICQTAVAKLSVC
KGLQLPTSEFAYYADLVSISSPSPLETASVQSISVMAVAPEGTARFWPSLAHEGNYTETV
VDMGENLCNFVVAVRGGSFIVSSYKGQMMRLGADPSGKLLQRALQQGQGVLSGIGRRVSS
LFGMRAPLTNNNLHSVLWVGETGCLYTLTSCGLSKWELDEVTEHQVLSWDSSRALTESVA
DAIWGSESNYEEIKEGVNVTYMDMQLSQDGLVVLAAAWHPSDSPCLAYFCLVTLLDNGNN
ISDELSVEVTKYNPPFQSEDALQAMRLMLPRASSPAAFLYNEELVFACSTGTGRGGLPEE
KIPFNTPGDRLRGGGCCANLPVFFSQNSGLVAVVARESASMLPETMEDSLCFSLAGAGPE
ATAMETPTRMEPVAQEDKTKLLKAAFLQFCRNDLVGAQTMTDELFPPEGDGDGEVGGELD
LVVTRINLDLVDDYPASDPRWAESVPDESAGFPLTSLIILHQLEDKMKAHGCFMDFLLQV
GLLDRLGQTAVRSSPMATRLLLCEHAEKLQAAMTLKNHHAKHGELVNRAILIALRKSNAT
VSTSLTAADVFFREVSQISSVFECLLEEEERTLKENPVDSVKWAEVVLSVNTIIKDMLQA
AGQYRDTKASLYRASESTPAEPEYIPWTASSGLGGVRTVIARQHEVILRDVYPHADSELR
NGLNEQLAALLDVLLGGYVAQLTSLRPGRPGQQDHYNTLEMEYTQRRSELLAPLLELGQY
QWVAALAEKYCDFDILVQMCEQTDNQNRLQHYMAKFADQNFADFLFRWYMEKGKRGKLLS
QPIAQHQQLASFLQSHEHLSWLHHIHVHDFSSAYKTLYGQANMETRYFVKKKTLLALSKL
TALASDMPEAVMKKHVDEMVEQERFLLHQETLPKQLLEEKQQNPDTMPLLSAHNLINLYI
CDDNRRANEYDFKKALDLLEYIDEDDAVDIEGLKCEIFCKALKKDDWLSADGNDDPLEAA
KDSIFVKILLKLIQEGVPLQTYLPDVKDLLQLDEMEALKLKPTFEFVLRANYEHYLQAQI
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtttagccctcgttctacccctagttccggccgaaggcagtcctcaagagtcaccggt
agaaagagtctcgccggtacacctacagggcttctcttttccccacgtaggacgtcgtta
gcagcgagatcaactcccacgcgtgtccagagctactcaacttcagacgcactccacttc
gatgtccagacgtttggctcttctctacctgtcaaagtcatggaggctttgacaatggct
gatgccgatgaccagatctctgtgaaggtggatgagagtggctgggcctggatggtgtgt
ggagagagactgatcatctggaagatctgccagactgctgttgcaaagttgtcagtatgt
aagggcctccagctgcccactagtgagtttgcctactatgctgatctcgtctccatatca
tctcccagccctctggagactgccagtgttcagtctatctctgtcatggcggtggctcca
gagggaacagcccggttctggcccagtttggcccacgaggggaattacactgagactgtg
gtcgacatgggcgaaaacctctgcaactttgttgtggctgttagggggggtagttttatc
gtgtcatcctacaagggccagatgatgcgcctcggggcggacccctccggaaagctgctg
cagagggcgctacagcagggccagggggtgctctccggcatcggacgccgcgtctccagc
ctgtttggcatgcgcgccccgctcaccaacaacaatctccacagtgttctgtgggtgggc
gagacaggctgcctgtatactctgacctcctgtgggctcagtaaatgggagttggatgag
gtcacagagcaccaggtcctcagctgggactccagccgcgctctgacggagagtgtcgcc
gacgccatctgggggtcagagagcaactatgaggaaatcaaggaaggagtgaacgttacc
tacatggacatgcaactgagccaggatggcctggtagtgttggcggcagcctggcacccc
tcagactccccctgcctggcctacttctgcctggtcaccctgctggacaacggcaacaac
atttctgatgagctctctgtggaggtcaccaagtacaacccccccttccagagtgaggat
gctctccaggccatgaggctgatgttaccacgggcctccagccctgctgccttcctgtac
aacgaggagctggtgtttgcctgctccaccggtaccggcagaggaggtctacctgaggag
aagatccccttcaacacacctggtgaccgtctgcgtggtgggggctgctgtgccaacctg
ccggtgttcttctcccagaacagtggtctggtggccgtggtggccagagagagtgcctcc
atgctgcctgagaccatggaggactccctctgcttttccctggctggggccggccctgag
gcaactgctatggagactccgactaggatggagcctgtagcgcaagaggacaaaaccaaa
ctcctaaaagcagcgtttctgcagttctgccggaatgacctggtgggggcccagaccatg
acagacgagctgttcccccccgagggggacggagacggggaggtgggcggggagctggac
ctggtggtgacccggatcaacctggacctggtggatgactacccagcctcagacccccgc
tgggccgagtctgtccctgacgagagtgctggcttccccctgacctccctcatcatcctc
caccagctagaggacaagatgaaggcccacggctgcttcatggacttcctgctacaggtg
ggtctcctggaccggctgggccagaccgcggtgcgctcgtctcccatggcgacgcgcctg
ttgctgtgcgagcacgccgagaagctacaggcggccatgacgctgaagaaccaccacgcc
aagcacggcgagctggtcaatcgtgccatcctcattgccttgaggaagagcaacgcaacc
gtgtccaccagcctcacggccgcagacgtcttcttcagagaggtgtctcagatctcctca
gtctttgagtgtctactagaagaggaggagaggactttgaaggagaaccctgtggactct
gtgaagtgggctgaagtggtgctcagtgtcaacaccatcatcaaggacatgctgcaggct
gctggtcagtacagagacaccaaggcctcactgtacagagcctcagagagcacccctgct
gagccagaatacatcccatggaccgcctctagcggtctgggaggggttcgcaccgtcatc
gcccgccagcacgaggtgatcctgcgtgacgtgtaccctcatgccgactcggagctgcgc
aatggcctgaacgagcagctggcagcgctgctggacgtgctcctgggaggctacgttgcc
cagctgacctcactgagaccgggccgtccgggccagcaggaccactacaacaccctggag
atggagtacacgcagcgccgctctgaactgctcgcaccactgttggagctgggtcagtac
cagtgggtggcagcactggcagagaagtattgtgactttgacatcctggtccagatgtgt
gagcagactgacaaccaaaacagactgcagcactacatggccaagttcgccgaccagaac
tttgcggacttcctgttccgctggtacatggagaaggggaagaggggcaagctgctctcc
cagcccatcgcccagcaccagcagctggccagcttcctgcagtcccacgaacacctcagc
tggctgcaccacatccacgtccatgacttcagcagtgcttacaaaaccctgtatggccag
gccaacatggagacacgttactttgtgaagaagaagacccttttggctctcagtaaactg
actgccctggcatcagacatgcctgaggctgtgatgaagaaacatgtagacgaaatggtc
gagcaggagcggttcctgctgcaccaggagactctgcccaaacagctgctggaggagaaa
caacagaaccccgacaccatgcccctgctcagcgctcacaaccttattaatctgtatatt
tgtgatgacaaccgacgagccaatgagtatgacttcaagaaggctctggatctactggag
tacatagacgaggatgacgctgtggacattgagggactcaagtgtgagatcttctgcaag
gccctcaagaaagacgactggttgtctgctgatgggaacgatgaccctctggaggcagcc
aaggacagcatctttgtcaagatcctcctcaagctcatacaagaaggtgttcctctacag
acctaccttcctgacgtcaaagaccttcttcagctggacgagatggaggctttgaaatta
aagcccacttttgagtttgtactgcgggccaactatgaacattacctgcaagcacagatc
taa
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