Oncorhynchus masou masou (cherry salmon): 135523763
Help
Entry
135523763 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-4-like
KO
K06525
integrin beta 4
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04382
Cornified envelope formation
omm04510
Focal adhesion
omm04512
ECM-receptor interaction
omm04810
Regulation of actin cytoskeleton
omm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135523763
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135523763
09142 Cell motility
04820 Cytoskeleton in muscle cells
135523763
04810 Regulation of actin cytoskeleton
135523763
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
135523763
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omm04147
]
135523763
04515 Cell adhesion molecules [BR:
omm04515
]
135523763
04090 CD molecules [BR:
omm04090
]
135523763
Exosome [BR:
omm04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
135523763
Exosomal proteins of bladder cancer cells
135523763
Cell adhesion molecules [BR:
omm04515
]
Integrins
Integrin beta subunits
135523763
CD molecules [BR:
omm04090
]
Proteins
135523763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
PSI_integrin
EGF_Teneurin
I-EGF_1
EGF_2
EGF_integrin
EGF_TEN
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
135523763
NCBI-ProteinID:
XP_064806721
LinkDB
All DBs
Position
31:29313642..29344198
Genome browser
AA seq
2020 aa
AA seq
DB search
MREMGRWTLNLLVGVVLLAVLTASCYAEKVNHCLATRASTCSECIQSGKGCAYCPDEIFD
GPRCDLHDNIISRGCNSAVTAKSSMSMERNEQINMLLKQSQVAPQEMSMTLLPGEEREIE
MEVFEPAKGPLDLYILMDFSNSMEDDLDNLKRMGSELAALVGKLSDDYTIGFGKFVDKVV
EPQTDMRPSKLAKPWPNSDPPFSFRHVITLTPDLRSFTEKLQKERISGNLDAPEGGFDAI
LQAAVCGEKIGWRSHATHLLVFSTESAFHYEADGANVLAGIMPRNDEQCHLDPEGKYTED
TRQDYPSVPTLVRLLGKHNIIPIFAITNHSFTYYQKLYEYFPIAELGLLQEDSANILNIL
EKAFENIRSKISIRAEDRPKAIEAQVLSYSGSVAQAGTFKVKPGQIGKFKVRVKASEMVG
EQHVCSLEQGDKKGKMRVKPTTFSTALNINAEVLCKTCDCEKTPTKNAVRCTGHGDLVCG
KCRCYGGWLGPFCNCSTSASPVAGSSCLGPDVGEPCSGRGDCLCGACVCYNTDQYEGSLC
QFDKSQCQRYGGFLCNDRGRCFMGQCACAEGWEGPACECPMSNQTCLDTKGGVCNGRGVC
KCGRCECQDSGLAMTPTCEANFQAQLGMCEDKRSCVQCQAWKTGEKKDSDQCDRCQFKVV
MVDELKENKEVIEACSFRDEDDDCTYHYTVDYPEEQTDKELEVQVLKKKDCPPAGFLWLI
PLIMFLMLLLGLLLLCCWKYCACCKACLALLPCCGRGRMVGFKEDQYMLRQSLLTSDHLD
TPLVRTGPPKSTDVVRWKITDNVHRSPNHPLAQVQPNPKETIQFPLSLRLNRLFTESLSH
PDARDTEMLRREVDDNLNEVYKHVPGAQKVQNTKFRLQRNAGKRKDHTIADTVVSAPRSS
YPDIVKLTEKNVQSGNFQDLKVVPGYYTVATDREAAGAVEFQEGVETVDVRVPLFIKEDD
DDKKQLQVEAVDVPLGIAEIGKRFVNITIIKDHAKSIMSFLQPSYTYSRQDRVANIPISR
EIIEDGHTQVTYRTRDLTAKDKKDYVTVDGELSYGPGETQQTVPVRLLELGEGDGLLKDT
QVKQFVMDLSNPRQGAKLGRYPRTTVTITDQPEPSVMMFMKSTQNFSTADPTYSVPVVRT
RNQEGPATVHWKTRNAKRFELSGPLKFAPGETEKNIVIDPRPHPGPVKPEIFQLELFDPS
TNAAVGERKTTMVTITDGALPEIAQKQQQGKDFINRTAMSPGGRLFSPTNVKAKATGPRN
IRLNWDPXGSPLGYKVKYWIYGDPETDGQVIDVKTTHAELTNLYPFCDYEMKVCGYNALG
NGNYSDMVPCQTLEDVPSEPGRLAFNVISPTVTQVSWAEPAETNGVITNYEVLYTPINDN
TKPMGVAKKVKIDNPKKRMLLIENLQSAQTYCYKVRAKNSVGWGPFREATINLASQPVRP
MSIPIIPDIPIVDAEAGDEYDGYLMYSSEVLRSPTGSKRPSVSDEDQMNGRWEQNFLFPG
GNNSMSRSANMSSSSYSQLSPMSTLSSNHRGGAGGSMTTESSTTYLSGQGGNSLSRTQVF
GGGTRTENVVMRKRSENRGYYEYDDNIRDSIVIGDLSSGLSGYTDGKSTYGFSPTQTQYS
YSMSQVLRGRTQSEDVNDALLNLDRVLQDSRLASGVPDTPTRLVFSALGPTALKVSWQEP
HCDRDVLGYCVLYQLLNGGDMKRIDVSSPAENSVVVQDLLPNHSYLFKVKAQSLEGWGPE
REGVITIESAVNPNSPLSPMPGSPFTLSTPSAPGPLVFTALSPEALQLSWDKPRKPNGDI
LGYVVTCEQLHGGGDMRSFQVSGNSAETSLTVPDLSENMPYKFKVQARTTQGFGPEREGI
ITIESQDGGSTSQIGGIGGMSQLGGLGGMSQIGGLGGMSQLGGLGGMSQIQGLGGMSQLG
GLGGMSQIEGLGGMSQYSSQSLTKRDVFQLPTEVSTHSNVTHTMINDPYFSGDGMMMTSQ
HTETSGMVTRHVTKEVVQRSMQVAGSSSVTKKVERSFYEA
NT seq
6063 nt
NT seq
+upstream
nt +downstream
nt
atgagggagatggggagatggacattaaatctcttggtgggggttgtacttcttgctgtc
ctcacagccagttgctacgctgaaaaagtgaatcactgtctggctacgagggctagcacc
tgttcagaatgtattcagtcagggaagggctgtgcctactgtccagatgagatcttcgat
ggtccccgctgcgaccttcatgacaacatcataagccgcggctgtaatagcgcggtgaca
gccaaaagcagcatgtcgatggaaagaaacgagcagatcaacatgctgttgaagcagtcc
caggtagctcctcaggagatgtctatgactctgctgccaggggaggagagggagatcgag
atggaggtgtttgaaccagctaaaggacctctggacctctacattctaatggacttctcc
aactccatggaggacgacctggacaacctcaagagaatgggttctgagctggctgcgttg
gtagggaagctgtctgatgattacaccattggtttcggcaagtttgtggacaaagtggtg
gagccccagacagacatgagaccatccaaacttgccaagccttggcccaacagcgaccct
cccttctcgttccgtcatgtgatcactctgacccctgacctgcggtccttcaccgagaag
ctgcagaaggagaggatctcagggaacctggacgctccagaggggggcttcgacgccata
ctgcaggctgcagtctgcggggaaaagatcggctggcgtagccatgccacccacctcctg
gtcttctccaccgagtcggccttccactacgaggcggacggtgccaacgtactggcgggc
atcatgccacgcaacgacgagcagtgccacctggaccccgaggggaaatacacagaggac
accaggcaggactacccctctgtgcccaccctggtccgcctgttgggcaaacacaacatc
atccccatcttcgccatcacaaaccactcctttacctattatcagaagctttatgagtat
ttccccatcgctgagttgggtctgctacaggaagactctgctaacatcctcaatatcctg
gagaaagcctttgagaatatccgctctaagatcagcatccgtgctgaggacaggcctaaa
gctatagaagctcaggtcctatcgtacagtggcagtgttgcgcaggctggaaccttcaaa
gtcaagcctggacaaatagggaagtttaaggtgcgtgtcaaggccagtgagatggttggg
gagcaacatgtgtgcagtctggagcagggtgacaaaaaggggaagatgagagtcaaaccg
acaaccttcagcacagctctaaacatcaacgccgaagtgctctgtaaaacctgcgactgt
gagaagacccccactaaaaatgcagtgcggtgtacaggccacggggacctggtctgtggg
aagtgccggtgctacggtggctggctgggtccgttctgtaactgctcaaccagtgcgtcg
ccggtggcgggaagttcctgtctgggtcctgacgtgggggagccgtgttctggccgagga
gattgcctgtgcggagcgtgtgtgtgttacaacacggaccagtacgaggggtccctctgt
cagtttgacaagtcccagtgtcaacgatacggaggcttcctctgcaacgaccgtggtcgt
tgcttcatgggtcagtgtgcgtgtgcagagggctgggagggaccggcctgtgagtgtccc
atgagcaaccagacctgtctggacactaaagggggtgtctgtaacgggcgtggtgtgtgt
aagtgcggtcgctgtgagtgccaggactctggcctggccatgacccccacctgcgaggct
aacttccaggcccagctggggatgtgtgaggacaagaggagctgtgtccagtgtcaggcc
tggaagaccggagagaagaaggacagcgaccagtgtgaccggtgccagttcaaagtggtc
atggtggacgagctcaaggaaaataaagaggtgattgaggcgtgtagtttccgcgacgag
gatgacgactgtacgtaccactacaccgtggactaccctgaggagcagactgacaaggaa
ctggaagtacaggtgcttaaaaagaaagactgtccccctgctggcttcctgtggctgatc
cctctcatcatgttcctcatgctactgctgggtctactgctgctctgctgctggaagtac
tgcgcatgctgcaaggcatgtcttgctctgctgccatgctgtggaagaggccgtatggtt
ggctttaaggaggaccagtacatgctccgccaatccctgctcacctctgaccacctggac
acgcccctagtgaggaccggcccgcccaagagcaccgacgtggttcgctggaagatcacc
gacaatgtgcaccgatcgcccaatcacccgctggcgcaggtccagcccaaccccaaagag
accatccagttccctctgtccctgcgtctgaacaggttgttcacagaaagtctgtctcac
cccgacgccagagacacggagatgctgcgcagagaggttgatgacaacctgaatgaagtg
tacaagcatgttcctggagcccagaaggttcagaataccaaatttagattacagagaaat
gctggtaaaagaaaagaccacacaattgcagacacagtcgtgtccgctcctcgctccagc
taccccgacatcgtcaaattgactgagaaaaacgtccagtctggaaacttccaagatctc
aaagtggtgccgggctactacacagtggccacagatagagaggcggctggtgccgtggag
ttccaggagggggtggagacggtggatgtgcgcgtgccgctcttcatcaaggaagatgac
gatgataagaagcagctgcaggtggaggcggtggacgttcctctgggcatcgctgagata
gggaaacgcttcgtcaacatcaccatcatcaaagaccacgccaagagtattatgtcgttc
ctccagccttcctacacctacagccgacaggacagagtggctaacatccccattagcaga
gagattatagaggacggacacacacaggtcacctaccgcacccgagacctcaccgccaag
gacaagaaggactatgtgacagtggatggggaactgtcctacgggccaggggagacccag
cagactgtccctgtgcgtctattggagctgggagagggagacggtctgctgaaggacaca
caggtcaaacaatttgtcatggacctcagtaacccaagacagggagccaagctgggacgc
taccccagaaccaccgtcaccatcactgaccaaccagagcccagtgtgatgatgtttatg
aagagcacccagaacttctccacagctgacccaacctactctgtccccgtggtccgcaca
cgcaaccaggaggggcccgccaccgtccactggaagacccgcaatgccaagcgcttcgag
ctgtccggtcccctcaagtttgctcccggggagactgagaagaacatcgtgatcgaccca
cgccctcaccctggaccggtcaaaccagaaatcttccagctggagttgtttgaccccagt
acgaacgccgcggtcggggagaggaagacgacaatggtcacgattacagatggagcatta
ccagagattgcccagaagcagcagcagggtaaggacttcatcaaccggacagccatgtct
cctggtggtcgtctcttctctcccaccaacgtcaaggctaaagccactggcccacgaaac
atccgtctcaactgggaccctntaggaagccccctgggctacaaggtgaagtattggatc
tatggggaccctgagactgatggccaggtgatagatgtgaagaccacccacgctgagctg
accaacctgtaccccttctgtgactacgagatgaaggtgtgtggctacaacgccctggga
aacggaaactacagcgacatggtgccctgtcagaccctggaggacgtccccagtgagccc
ggtcgtcttgcgttcaacgtcatcagtccaactgtcactcaggtcagctgggcggagcct
gccgagaccaacggtgtcatcaccaactacgaggtcctctacacacccatcaatgacaac
acaaagccgatgggtgtagctaagaaggtgaagatagacaaccctaagaagaggatgttg
ctaattgagaatctgcagtcggcccagacctactgctataaggtccgggctaagaacagc
gttggctggggtccattcagagaggcaaccatcaacctggcctcacagcccgtcagaccc
atgtccatccctatcatcccagacatcccaatagtggacgcggaggcgggggatgagtac
gacggctacctgatgtacagcagcgaggtcttgaggtcgccaacaggctccaagagaccc
agcgtctcagacgaagaccaaatgaacggcaggtgggaacaaaacttcctgttccccggg
ggaaataattccatgtcgcgcagtgccaatatgtcgtcttccagctacagccagctgtct
cccatgtccaccctcagctccaaccacagaggaggggccggaggttccatgaccacggag
tcctccacaacatacctctctggacaaggagggaactcgctctcccgcactcaggtgttc
gggggcgggacgcgcacagagaatgttgtcatgaggaagcggtcagagaacagaggttac
tatgaatatgatgacaacatccgagattccatcgtcataggagacctgtccagtggattg
tcgggatacacagacggcaaaagtacgtatggcttcagccccactcagacacagtacagc
tacagtatgtctcaggtcttgcggggcaggacccagtctgaggatgtcaacgatgcgcta
ctgaatctggacagggtgctccaggactctcgtttggcctctggggtccctgacaccccc
accaggttggtgttctctgccctgggccccacggccctgaaggtcagctggcaggagccc
cactgtgacagggatgtgctggggtactgtgttctctaccagctactcaatggaggtgat
atgaagcgtatagacgtgtccagcccagcagagaactctgtggtggtgcaggacctgctg
ccgaaccactcctacctgttcaaggtaaaggctcagagtctggagggctggggaccagag
agggagggagtcatcaccatagagtcagccgtcaaccccaacagcccactcagtccaatg
ccaggttctcccttcactctcagcacccccagtgctccaggccccctggtattcacagct
ctgtcccccgaggcactgcagctgagctgggacaaaccccgcaaacccaacggagatatc
ctgggctacgtggtcacctgtgaacagctgcacggaggaggtgacatgcgttccttccag
gtgagcggtaacagcgctgagaccagtctgacggttccggacttgagtgagaacatgcca
tacaagttcaaagttcaggccaggacgacgcagggcttcgggcccgagagggagggtatc
atcaccatcgagtctcaggatgggggtagcacgtctcaaataggtggaataggtggaatg
tctcaactaggagggctaggtggtatgtcccaaataggaggcctaggtggtatgtctcaa
ctaggaggcctaggtggtatgtcccaaatacaaggcctaggaggtatgtctcaactagga
ggcctaggtggtatgtcccaaatagaaggcctaggaggtatgtctcagtacagcagtcag
tccttgaccaagagagatgtgttccaactgccgacagaggtcagcacccacagcaacgtc
acacacaccatgatcaacgacccctacttctcaggggacggtatgatgatgacttcccag
cacacagagaccagtggcatggtaacccgtcatgtgactaaggaggtggtccagaggagc
atgcaggtggccggctccagcagcgtcaccaagaaagtcgagaggtcgttctatgaggct
tga
DBGET
integrated database retrieval system
