Oncorhynchus masou masou (cherry salmon): 135523804
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Entry
135523804 CDS
T10723
Symbol
rhbdl3
Name
(RefSeq) rhomboid-related protein 3 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omm01002
]
135523804 (rhbdl3)
Enzymes [BR:
omm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
135523804 (rhbdl3)
Peptidases and inhibitors [BR:
omm01002
]
Serine peptidases
Family S54: Rhomboid family
135523804 (rhbdl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
EF-hand_1
DUF5580_M
EF-hand_5
EF-hand_11
AIF-1
EF-hand_9
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
135523804
NCBI-ProteinID:
XP_064806797
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Position
4:10962073..11017181
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AA seq
408 aa
AA seq
DB search
MPDASRDNPVHSSPAVAANAEGDEIEVLESIDVLPVAPEDQWKSLFDKFDSESSGFISTE
RFRDLLADHGSELDPHKLEVLLALADGNADGKICYQDFVNLMSNKRSNSFRRAILQGGRQ
LKGAGALGEEVGLGLSQRLVRHIAYETLPREIDRKWYFDSYTCCPPPWLILAITIAEVAV
FMYYGLQLDRWVLQVSSPYFLRSPLPYHPQLRIQAWRYLSYAFMHAGIEHLGLNMAMQLL
VGVPLEMVHGALRIGLVYVCGVLAGSLAVSVTDMTAPVVGSSGGVYALVSAHLANVVMNW
SGMKCQFKLFRMAMALVCMSVEFGRAVWLRFYPPAFPPCPNPSFVAHLGGVMVGLTLGVV
VLQNYEQRLQEQSLFWIFFSVYFLFVLCAVFWNVFAYNLLDVRLPPTP
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgcgtctcgggacaatccggtgcattcctctccagcagtggcagcgaacgcg
gagggagacgagatagaagtgctggagagtatcgatgttcttcccgtggctccagaggac
caatggaaatctctgttcgacaagttcgactcagagagttcaggcttcatcagtacagag
cggttcagagacctgctggcggaccacggctcggagctggaccctcacaagctggaggtt
ctattggccctcgctgacggcaacgcggacggaaagatctgctaccaggactttgtcaat
ctgatgtccaacaagcgcagcaacagcttccggcgggccatcctccaggggggtcgtcag
ttgaagggtgccggggccctgggggaggaggtgggtctgggtctgtcccagaggctggtg
aggcacatcgcctatgagaccctgccccgggagatcgacaggaagtggtacttcgacagc
tacacctgctgcccaccaccctggctcatcctggcgatcaccatcgctgaggtggcagtg
ttcatgtactatggcctgcagttggaccgctgggtgttgcaggtgtccagtccctacttc
ctgaggagcccactgccctaccacccccagctacggattcaggcctggagatacctcagc
tatgccttcatgcacgcagggatagaacacctgggtctgaacatggccatgcagctgctg
gtgggagtccctcttgagatggtccatggagcgctgaggataggactggtctacgtgtgt
ggcgtactggcaggctccctggccgtgtctgtcactgatatgactgctccggtggtgggg
tcgtctggaggagtctacgccctggtctcagcacacctggccaacgtcgtcatgaactgg
tcgggtatgaaatgtcagtttaagctgttccggatggccatggctctggtctgcatgagt
gtggagttcggccgtgccgtgtggctgcggttctacccgccggccttcccgccttgcccc
aaccccagctttgtggcccacctggggggtgtgatggtggggctcaccctgggggttgta
gtcctccagaactacgagcagcgtctccaagagcagtctctattctggatcttcttctcc
gtctacttcctctttgtcctctgtgctgtcttctggaacgtcttcgcctacaacctgctg
gacgtcaggctcccccccacgccgtga
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