Oncorhynchus masou masou (cherry salmon): 135523875
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Entry
135523875 CDS
T10723
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135523875
Membrane trafficking [BR:
omm04131
]
Protein recycling
Others
Retriever complex
135523875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
135523875
NCBI-ProteinID:
XP_064806942
LinkDB
All DBs
Position
31:complement(35434120..35447492)
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AA seq
972 aa
AA seq
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MAAVQWHSRARRYESELQSCGLEVAPVEFSDYHPLKSITVTDSKSRRGARKGSTSSSSSS
SSSVAPDPLSSMLDGTDPLSMFAAASASESPLTLSQSSSTGDLGRGKRREKEDEVGVDFE
PWSSKRGEILARFTTTEKLSINLFMGSEKGKAPSLASSAVSEKVRTRLEELDDLEEGSQR
ELLNLSQQDYVNRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTAVIQFYPSKFVLI
TDILDTFGRLVYERIWSMCSDPRPLPDPSPDSFTADEVNDTAKETCLNWFFKIASIRELI
PRLYVEVALLKCNRFLTKCGIQETVPRLTAMIRGIGDPLVAVYARAYLCRIGMEVAPHLK
DSLNKNFFDLLGTFRQIHGDSVQNQLVLQRVEIPVYLTLYSPAIHWILQCVSYRAPEALL
TEMMERCKKLGNNDLLLNSVMWAFRAEFIATRATDFIGMIKDCDEAGFPKHLLFGSLGRS
LACADPPEAERLPILNEAWKVITKVRSPQDYINCAEIWVEFTCRHFTKREVNTVLSDIIK
HMTPDRAFEDAYPQLQSVIRKILTYFHDFSVLFSMERFLPFMDMFQKDSVRVGVCLSIMD
VFIKHQQEPTRDPVILNALLHVCKTMHDSVNALTLEDEKRSLALLINGFIRMVSFGRDFE
QQLSFCVEARATFCNLEPVLVQLIHTVNQLAMETRRVMRGSHSRKTAAFVRACAAYSFIT
IPSLTSIFSRLNLYLLSGQVALANQCLSQADAFLKAAVSVLPEVPRSISIEGKLRSSEGF
LLDFINNFLSALLVVPDHPEAGVLFLVRGLLNMVQDYTWEDNSDAKVHVYISALPLLAAM
SQESYLYSIPKVDSNETLYGGDPKFLAEINKLCETLIGQVLDHLKTLGRDESVHRQGSLA
FSLFGCLLAHGDLRNNKLNQLAVNLWNLSHKQGYCNTRTSVRTLEFIKHQAQQPDMAHLS
DMLHRLTLQSRT
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtgcagtggcactctcgtgcacgcaggtatgagtctgaactgcagagctgt
ggcctggaggttgccccagttgagttcagcgactaccatcccctcaagtccatcactgtg
acagactccaagtcgcggaggggagcgcgtaaaggcagcacctcctcctcctcctcctct
tccagctctgtggcaccagatcccctgagctccatgctggatggaacggaccccctgtcc
atgtttgctgcagcctctgccagcgagtcccctctaaccctctcacagagcagctccact
ggggacttgggtagaggaaagaggagggagaaggaggatgaggttggagtggactttgaa
ccgtggtcatccaaacggggagaaatccttgccaggttcactaccacggagaagctctcc
attaatctcttcatgggctcagagaaaggcaaggctcccagtcttgcctcctctgctgta
tcagagaaggtgcgaactcgcctagaggagctggatgacctggaagaggggtctcagcgg
gagttgctgaatctgtcccagcaggactatgtgaaccgtatcgaggagctcaaccagtct
ctaaaagaagcctgggcctccgaccagaaggtcaaggccctcaagatcgtcatccagtgc
tccaagctgctgtcagacacagctgtgattcagttctacccaagcaagtttgtcctcatc
acagacattctggacacctttggacgtctggtgtatgagaggatctggtccatgtgttct
gaccctcgccccctaccagatccctctccagactcctttacagctgatgaagtgaatgac
acggccaaggagacctgcctcaactggttcttcaaaattgcctccatcagagagctcatc
ccacgactatatgttgaggtagctctcctgaagtgtaaccgtttcttgaccaagtgtggg
atccaggagacggtgcctcgcctcacagctatgatccggggaataggggaccccctggtg
gccgtgtatgcccgggcctacctctgtcggattgggatggaggtggctcctcacctgaag
gacagcctgaacaagaacttctttgacctgctggggacgttccgtcagatccacggcgac
agtgtccagaaccagctggtcctgcagagggtggagatccccgtctacctgaccctctac
tcccccgccatccactggatcctgcagtgtgtctcctacagagcaccagaggccctgcta
acagagatgatggagagatgcaaaaagcttgggaataatgacctgctgctgaactcggtg
atgtgggcgttcagggcggagtttatcgcgacgagagccaccgacttcatcggcatgatc
aaggactgtgatgaggcaggattccctaagcacctgttgtttggctctctgggccgcagc
ctggcctgtgctgaccctcctgaggcggaaaggctgcccatcctcaatgaggcctggaag
gtcatcaccaaagtgcgaagtccacaggattacatcaactgtgctgagatctgggtggag
ttcacctgtcgtcacttcactaaacgtgaggtcaacactgtgctctctgacatcatcaag
cacatgaccccagaccgggcctttgaggatgcctatcctcagcttcagtccgtgatacgg
aagatcctcacctacttccatgacttctctgtcctcttctccatggagcgtttccttccc
ttcatggacatgttccagaaggacagcgtcagggtgggggtgtgtctctccatcatggat
gtcttcatcaaacaccagcaggagcccactagagatcctgtcatcctcaacgctctactc
cacgtctgcaagaccatgcacgactctgtcaatgctctgacgctggaggacgagaagaga
tctctggccttgttgatcaatggcttcatacgcatggtgtcgtttggccgtgactttgag
cagcagctgagtttctgtgtggaggcccgggccaccttctgtaacctggagccagtgttg
gtgcagctcatccacactgtgaaccagctggccatggagacgaggcgtgtgatgaggggg
agccactcccgcaagactgctgcttttgtcagggcatgtgctgcatacagcttcatcacc
attccctccctcaccagcatcttcagccgcctcaacctctacctgctgtctgggcaggtg
gccctggccaaccagtgtctttcccaggcggatgcattcctgaaggcagcggtcagtgtg
ttgccagaggtgccacgcagtatcagtatcgagggcaaactgcgctcttctgagggcttc
ctgcttgacttcatcaacaacttcctgtcagcactactagttgtgccggaccacccagag
gcaggggtgttgttccttgtgcgtgggctgctcaacatggtgcaggactacacctgggag
gacaacagtgacgccaaggtccatgtctacatcagcgccctgccactactggctgccatg
agtcaggagagctacctctactccatccccaaagtggactcaaatgaaacactttatgga
ggagatcccaagtttttggcagagatcaacaagttatgtgaaactctgattggacaagtg
ctggaccacctcaagaccttgggtagagatgagagtgtccatagacagggtagtctggcc
ttctctctgtttggctgcctcctagctcacggggacctacgcaacaacaaactcaaccag
ctggctgtcaacctgtggaatctgagccacaagcagggttactgcaacacacgcacctcc
gtgcggacattagagtttattaagcaccaggcccagcagccagacatggctcacctttca
gacatgctccaccgcctcaccttgcagtccaggacctga
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