KEGG   Oncorhynchus masou masou (cherry salmon): 135523877
Entry
135523877         CDS       T10723                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:omm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:omm03036]
    135523877
   03400 DNA repair and recombination proteins [BR:omm03400]
    135523877
Chromosome and associated proteins [BR:omm03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    135523877
DNA repair and recombination proteins [BR:omm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     135523877
SSDB
Motif
Pfam: MMS19_C MMS19_N TOR1L1_N HEAT_ECM29 Sec7-like_HUS Adaptin_N
Other DBs
NCBI-GeneID: 135523877
NCBI-ProteinID: XP_064806945
LinkDB
Position
31:complement(35462736..35476251)
AA seq 1026 aa
MMATDSALLLGLVEEFVLGQQDRKAVDTATELKAGQFTILQLVEALGLHLTSSQPQTRGR
GVQLLSNVLQECYGDLTEREVEVLIVFYENRLKDHYVITPHVIQGLKALTKCSVLPPGSA
VSILKSLFQDIHVQSLMLAERSCVYNILIQLMESRESELKGLGADFVFGFVQSVDGERDP
RNLLLAFHIARKIVHEGYDLGKFTEELFEVTSCYFPIDFSPPANDPHGITQEELVLALRV
VLTGTPRFAEFLLPLIIEKLDSDVQSAKLDSLQTLTACASVYEHKDLAQFLPGLWASLRR
EVFQTASERVESAGLAAVGTLTACLSRSVLNSDSEDSLNVFLELVLKDCQHHLCEPDLKL
VWPSAKLLQATSTASYRASHRVAAAVLPSLIEQYNSRTQCAQRRTLLEVLQGFVHPVTSS
EEDESVLLDFRQSLCSIVFSALSESNADLQITSMRVLTALGQQTGLLLESDVELAVDHLT
RLILEEGDPKVSLAVVECAGALARLHPAAFISKMVPRLKDEIFSEPMAQGDSATPSQEHS
QQAVRQRCVAALAAVSSRPSLVQESTPVLLQVLTSAHTGTGAFSLEEVISVCHSLQKIAE
QAQDTEETGSVFHDVIPRLLGLALQAALQGSSGHCSPILEETVLSAMVPIISTTCARLQS
RLAGQTASRAVSLFLDGDVSFLPENAFPAQIQLLKTQAGDSRSQSQMVCLLMGCVCWLPR
TVEVPQMDRLLLELLELSCTCDHPLSYTSAAKCYAGLVNKSPAGEALDSLIDRTLKRIST
ELDSASSPVRTQAFTLLLWVSKALLLRYHPLSTALTDKLFSLLSDPELGWLAADGFSLLM
SDSPDVLNRGSHADVRIMYRQRFFTENSAKLVEGFNSAVQEKKSGYLKALSHIVNNLPRQ
VQLTELPALLPLLLEALSCPDQGVQVSTLSCLQPVLLDPPSALITQLEVLVGRTLALTTS
PTMKVRIASLRCIHALSRFPEHEIMPFRARVLRALAAPLDDHKRVVRSEAAVARNEWFLL
GSPGGR
NT seq 3081 nt   +upstreamnt  +downstreamnt
atgatggctacggatagtgccttgctattgggcttggtagaagaattcgttttgggacaa
caggaccgcaaggcggtagacaccgcaacagaactcaaggctggacagtttactatcctg
cagttggttgaagccttgggtttgcatctgaccagctcccaaccccagacccgaggccgt
ggtgtccagctcctctccaatgtcctacaggagtgttatggagaccttacagagagagaa
gtggaagtccttatagtgttttatgagaacagattgaaggaccactatgtcatcacacca
catgtcatacaggggctgaaagcgctgaccaaatgctcagtgttgccgcctgggtctgca
gtgtccattctgaaatcactattccaggacatccatgtgcagtccctgatgctggcggag
cggtcatgtgtttacaacatcctcatccagcttatggaatccagagagtcagagctgaag
ggcctgggtgcagactttgtcttcgggtttgtccagtcagtggatggggagagagaccca
cgcaaccttctgctggccttccatatcgctaggaagattgtccatgaaggctatgatctt
ggtaaattcacagaggagctgtttgaagtgacatcctgctatttccctatagacttcagc
cctcccgcgaacgacccccatggcatcacccaggaggagctggtcctggccctgagggtc
gtgctcaccggaacaccacgctttgcagagttcctgctgccactgatcattgagaagctg
gactccgatgttcagagtgccaagctggactccctgcagaccctgactgcctgtgcttct
gtgtatgaacataaagacttagcccaattcctaccaggcctttgggcctcgctgcgcaga
gaggtgtttcagacagctagtgagcgggtggagtccgctggcctagccgccgtcggtacc
ctgacagcctgtctctcccgctccgttctcaactccgactctgaagactccctcaatgtc
ttcctggagctggtcctcaaagactgtcagcaccacctgtgtgagccggacctgaagcta
gtgtggcccagtgcgaagctgctgcaggctacctctaccgcctcctacagggcgagccac
agagttgccgccgccgtcctgccgtccctcatagagcagtacaacagccgcacacagtgt
gctcagcggcgcaccctactggaggtgttacagggctttgtccacccggtgacgtcatca
gaagaggatgagagtgtgctgttggacttcaggcagtctctgtgcagtatagtgttctct
gctctgtctgagagcaatgctgacctccagatcacatctatgcgtgtgctcactgctctg
ggccaacagacaggcctgctgttagagtcagatgtggagcttgccgttgaccacctcacc
aggctcatcctggaggagggagatcctaaagtcagcctggctgtggtagagtgtgcaggg
gctctggctcgcctgcaccctgcagcgttcatctctaagatggttccacggctgaaggac
gagatcttctcagagcccatggcacaaggtgacagcgccacgccgtcccaggaacattcc
cagcaggcagtgcgtcagcgctgtgtggcggcgctggctgcggtgtcgtcgcggcccagt
ttggttcaggagagcacacctgtcctgctacaggtcctcacctctgcacacactggcact
ggcgcgttctcattggaagaggtgatctctgtctgccacagtctgcagaagatagcagag
caggcacaggacactgaagagaccggtagcgtcttccatgatgtcattcctcgcctgctc
gggctggcattgcaggcagctttgcagggttcctcaggtcattgtagcccgatactagag
gagactgtcctatcagccatggtacccatcatcagcaccacctgtgcccgcctacagtcc
cgactggctggccaaacagcctcgcgggccgtgtccctcttcctcgacggtgatgtttcc
ttcctgccagagaatgccttccccgcccagatccagctcctcaagacgcaggcaggtgac
tcccggagccagtcccagatggtgtgcctgctcatgggttgtgtgtgctggctgccacgg
accgtggaggtgccccagatggacaggctgctgttggagctgctggagctgagctgtacc
tgtgaccatccgctctcctacacgtcagccgccaagtgctacgctgggctggtcaacaag
agtcccgcaggtgaagccctggactctctgatagacaggacgttaaagaggatctccact
gagctggactctgcgtcctccccagtcagaacgcaggcgttcactctgctgctctgggtg
tcaaaggctctcctccttcgctaccaccctctgtccacagccctaaccgacaagctcttc
tccctgctcagtgacccagagctgggttggttagcggccgatggattctctctcctgatg
agtgactcgccggacgtcctgaaccgcggtagtcatgccgacgtgcgcatcatgtaccgc
cagcgcttcttcacggagaactctgccaaactggtcgagggcttcaactccgcagtccaa
gagaagaagtctggctacctgaaggcactgtctcacatagtgaacaatctacccagacag
gtccagcttactgagctaccagcgctcctgcccctcctactggaggccctgtcgtgtccg
gaccagggggtgcaggtgtctaccctgtcctgcttgcaaccggtcctcctggacccccct
tcagccctcatcacccagctggaggtgctggtgggccgcactctggcgctcaccaccagc
cctaccatgaaagtgcggatagcctcactgcgctgtatccatgccctctcccgctttcca
gaacacgagatcatgcccttccgtgcgagggtgctgcgcgccctggctgcccccctggac
gaccacaagagggtggtgaggagcgaggcggcagtggcccggaatgaatggttccttctg
gggagtccaggaggcaggtga

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