Oncorhynchus masou masou (cherry salmon): 135524059
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Entry
135524059 CDS
T10723
Name
(RefSeq) small nuclear ribonucleoprotein F-like
KO
K11098
small nuclear ribonucleoprotein F
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135524059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135524059
03041 Spliceosome [BR:
omm03041
]
135524059
03032 DNA replication proteins [BR:
omm03032
]
135524059
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
135524059
Spliceosome [BR:
omm03041
]
Complex A
U1 snRNP components
Sm proteins
135524059
U2 snRNP components
135524059
Complex B
U1 snRNP components
135524059
U4/U6.U5 tri-snRNP components
135524059
Complex C
U2 snRNP components
135524059
DNA replication proteins [BR:
omm03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
135524059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
135524059
NCBI-ProteinID:
XP_064807282
LinkDB
All DBs
Position
31:49538440..49539834
Genome browser
AA seq
87 aa
AA seq
DB search
MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDSYMNMQLANTEEYVDGALAGHLG
EVLVRCNNVLFIRGVEEEEEDGEMKDA
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaccgctgaatcccaaaccgtttctgaatggtcttactggtaagcccgtgatg
gtgaagctgaagtggggtatggaatacaagggatacctggtgtccgtggacagctacatg
aacatgcagttggccaacactgaagagtatgtagatggagcgttggctggacacctagga
gaggtgcttgtcagatgcaacaatgtcttgttcataagaggagtagaagaggaggaagag
gatggggaaatgaaagatgcttga
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