Oncorhynchus masou masou (cherry salmon): 135524125
Help
Entry
135524125 CDS
T10723
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator-like
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm02010
ABC transporters
omm04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135524125
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
135524125
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omm02000
]
135524125
Enzymes [BR:
omm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
135524125
Transporters [BR:
omm02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
135524125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFTR_R
ABC_membrane
ABC_tran
SMC_N
DUF87
AAA_21
RsgA_GTPase
AAA_29
AAA_16
T2SSE
FtsK_SpoIIIE
nSTAND3
MMR_HSR1
AAA_23
Dynamin_N
ATP-synt_ab
NB-ARC
AAA_30
nSTAND1
DO-GTPase2
MeaB
Zeta_toxin
NTPase_1
Motif
Other DBs
NCBI-GeneID:
135524125
NCBI-ProteinID:
XP_064807406
LinkDB
All DBs
Position
31:54308542..54353466
Genome browser
AA seq
1519 aa
AA seq
DB search
MQKSPVEDANFLSKYVFWWTSPLLRKGFRKKLDLTDVYKAPSFDLADNLSERLEREWDRE
VASAKKKPRLLRALSRCFLWPFVFYGILLYFGEASKAVQPQLLGRIIASFDPFHAPEREQ
GYYLALGLSLLFITRFLLLQPAIFGLHHLGMQIRIALFSLIYKKTLKLSSRVLDKISTGQ
LVSLMSAHLNKLDESLGLAHFVWITPLQCILCVGLIWELIEVNGFCALAALTLLGIVQAC
LSQKMGPHRQKRAGMISRRLALTSEIVENIHSVKAYGWEEVMETIIKNIRQDEMSLTRKI
GSLRYFYSASYFFSAILVIVSAIVPHALSKGIILRRIFTTASYCMVLRMTLTRQLPGSIQ
MWYDTLALVTKIEEYLCKEEYKVLEYNLTTTEIELVNVTASWDEGIGELFEKIKQENKAN
GHPNGDAGLFFTNLYVTPVLKNISLYLEKGQMLAVAGSTGSGKSSLLMMILGELVPSEGK
IRHSGRISFSPQTSWIMPGTIRDNILFGLTYDEFRYTSVIKACQLEEDLALLPEKDKTPL
MEGGVTLSGGQRARIGLARAVYKDADLYLLDSPFTHLDIVTEKEIFERCLCKLMSSKTRI
VVTSKLEHLKRADKILLLHNGVCYFYGSFSELQAKRPDFSSLLLGLEAYDNINAERRSSI
LTETLRRVSIDESAVFRGPEPIHQSFRQPPPPIICTNNCPQAITIAGGDGLTAAEKRKQS
IILNPLAPARKFSFIGAGSQKAQAPPPGSTTIEDAVRELSERKFSVVPEDDQVEESLPRG
NQYHHGLQHLSGQRRQSVLQFITNARGEGRREQLQTSFRKKLSITPQCELASELDIYARR
LSKDSVYDISEDVDEQDMEQCFADERRNVFDTTSWNTYLRYIFTNRNLVYVLIFIFLVFA
VEVAGSVLGIFLITDKIWTEEANPSAPNFVDQQHANASSPAVQKPVIVTPTSAYYIIYIY
VATSESVLALGFFRGLPLVHTLLTVSKRLHEQMLTAVLRAPMAVLNTMKTGRIMNRFTKD
MATIDDMLPLALFDLIQLTLIVLGAIFTVSIMRPYIFIAAIPLAVIFVILRKYFLHTGQQ
LKQLEAEARSPIFSHLIISLKGLWTIRAFGRQSYFETLFHKALNTHTATWFHYLATLRWF
LFRCDIIFVFFFSAAVFIAVGTNQDKPGEIGIIVALAMLILGTFQWAVITSITVDGLMRS
VDRVFKFIDLPQEEPRPSGGGGKGTDLVIDNPHAQDCWPNQGHMDVQGLTVKYTEAGRSV
LQDLSFTVEGGQSVGVLGRTGSGKSTLLSALLRLASTDGEISIDGVSWNSVTLQTWRKAF
GVVPQKIFILTGTFRMNLDPHARYSDEELWRVAEEVGLKSVIEQFPDKLDFQLEDGGYVL
SNGHKQLMCLARSILSKARILLLDEPSAFLDPITLQVLRKTLKQSFSNCTVILSEHRVEP
LLECQSFLMIEGSSMKRYDSIQKLLNETSHLKQAMSAAERLKLFPLHRLNSSKRPPQSQQ
PKITALQEVAEDEVQNTHL
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagtcacccgtggaagatgcaaacttcctctccaaatatgtattctggtggaca
tctccactgttgaggaagggcttcaggaagaagttggatttgaccgatgtttacaaagca
ccgtcctttgatctggcggacaatctttctgaacgactagaaagagaatgggaccgagaa
gtggcatcggccaagaagaagcctcggcttctgcgggctctctcccgttgtttcctctgg
ccttttgtgttctacggaatcctgctgtactttggggaggcgtcgaaggcagtgcagccc
caactcctgggtcgtatcattgcctcgttcgacccctttcatgccccggagagggagcag
ggctactacctggccctgggtctcagtcttctcttcatcactcgcttcctgctcctgcag
ccagccatcttcgggctgcaccacctgggcatgcagatacgcatcgctctcttcagcctc
atctataagaagactctgaagctgtccagccgggtcctggacaagatcagcacaggtcag
ctggtcagcctgatgtcagcccacctcaacaagctggatgagagccttggcctggcccac
tttgtgtggatcacccctctgcagtgtatcctgtgtgtgggtttgatctgggaactgatt
gaggtgaatggtttctgtgccctggctgccctcaccctgctgggcatcgtacaggcctgc
ctctcacagaagatggggcctcacaggcagaaaagagcagggatgatcagtcgtcgcctg
gctctgacctcagagatagtagagaacatccactcagtgaaggcctacggctgggaggag
gtgatggagaccatcatcaagaacatcagacaggatgagatgtcattgacgcggaagatt
ggttctctgcgttacttctacagcgcctcctacttcttctctgccatcctggtcatcgtg
tcagccattgtgccacacgccctcagcaagggcattatcctgaggcggatcttcaccact
gcctcctactgcatggtgctccgtatgaccctcaccagacagctgcccggctccatacag
atgtggtacgacacgcttgcgctggtcacaaagatagaggagtacctctgcaaagaggag
tacaaagtattggagtacaacctgaccaccactgagatagagttggtgaatgtcactgcc
tcctgggatgaaggtatcggggaactctttgagaaaattaagcaggagaacaaggctaat
ggccaccctaacggtgacgcagggttgttcttcacaaacctgtatgtcacacccgtcctc
aagaacatcagcctgtacctggagaagggacagatgctggccgtggctggatccaccggc
tctgggaagagttccctgctgatgatgatcctgggggagctggtcccgtcggaggggaag
atcagacacagtgggcggatctccttctccccccagacctcctggatcatgcccggaacc
atccgtgacaacatcctgtttggcctgacctacgacgagttccgctacacctctgtcatc
aaggcctgtcagctggaggaggatttggccctgctgccggagaaagacaagacgcccctt
atggagggaggggtgaccctaagtggaggtcagagggcgaggataggcctggccagagct
gtgtataaagacgccgacctctacctactggattcaccttttacccacctggacattgtg
actgagaaagagatctttgagaggtgtctgtgtaaactgatgtcttccaagactcgcatc
gtggtcactagtaagctggagcacttgaagagagcggacaagatccttctgcttcacaac
ggagtgtgttacttctacggctccttctccgagctgcaggccaagagaccagacttcagc
tccctgctcctgggcctggaggcctacgacaacatcaacgccgaacgccgcagctccatc
ctcacggagaccctccgacgcgtctctatcgatgaatccgccgtcttccgtggccccgaa
cccatccaccagtccttccgtcagcccccgccaccgatcatctgtacaaacaattgtcct
caagccatcaccattgccgggggcgacggtctcacagcagcagaaaaacgtaaacagtca
attatccttaatccattagcgccggcccgtaaattctccttcatcggtgcggggtcccag
aaagcccaggctcctccacccgggtccaccactattgaggatgccgtgcgagagctgtca
gagaggaagttctcagtggtgcccgaggacgatcaggttgaagagtcgctgccgcggggg
aaccagtaccatcatggcctgcagcacctgagcgggcagcgccgccagtctgtgctgcag
ttcatcactaacgcccggggggagggcaggagggaacagctccagacgtccttcaggaag
aagctgtccatcacgccgcagtgcgagctggcctctgagctggacatctacgcacgacgc
ctgtccaaagatagtgtctatgacatcagcgaggatgtggacgagcaggatatggagcaa
tgctttgcagacgagcgcaggaacgtgttcgacacaacgtcgtggaacacctacctgcgt
tacatcttcaccaacaggaacctcgtctacgtcctcatcttcatcttcctcgtcttcgcc
gtggaggttgctggctctgtcctggggatatttcttatcacagataagatctggacagag
gaggccaacccgtcggcgcctaatttcgtagaccagcaacacgccaacgcctcgtccccc
gctgtccaaaagccagtcatcgtcacgccgaccagcgcctattacatcatctacatctac
gtggcgacgtcggagagcgttctggcgctggggttcttcagaggcctgccattggtccac
actttactgaccgtgtccaagaggctgcatgaacagatgctgaccgctgtgctcagggcc
cccatggctgtactcaacactatgaagactggtcggatcatgaacaggttcaccaaagac
atggccaccatcgacgacatgcttccccttgcactgtttgacctcatccagttaactctg
atcgtgctgggcgccatattcactgtgtccatcatgaggccgtacatcttcattgccgcg
atcccattggccgtcatattcgtgattctgaggaagtactttctgcatacgggacagcag
ctcaaacaactggaggctgaggcccgtagccctatattctcccacctcatcatctctctg
aagggtctgtggactatacgtgcatttggtcgtcagtcctactttgagacattgttccac
aaggccctgaacacccacacggccacctggttccactacctcgcaacgctgcgatggttc
ctcttccgctgtgacatcatcttcgtcttcttcttctctgccgcagtcttcatcgccgtg
ggaaccaaccaggacaagcctggggagattggcatcatcgtggccttagccatgctcatc
cttgggacgttccaatgggctgtcattaccagcatcactgtggacggactgatgcgatcg
gtagaccgggtcttcaagttcatcgacctgcctcaagaggagcccagacccagcggtgga
ggtggtaaaggaacagacctggtgatcgacaacccccacgcccaggactgctggcccaac
cagggccacatggatgtccaaggactgaccgtcaaatacacagaggctggacgctccgtc
ctgcaggacctctccttcactgtggaaggaggacagagtgtgggtgtgttggggaggaca
ggctcaggaaagagcactctgctatcggccctcctgcgactggcctctacagacggagag
atctccatcgatggggtctcctggaactcggtcaccctacagacctggaggaaagccttc
ggcgtggtgccacagaaaatcttcatcctgactggtacattccgtatgaacctggatcca
cacgctcgctacagtgacgaggaactgtggcgggtggctgaggaggtgggtctgaagtcc
gtgatagagcagttcccagacaagctggacttccagctggaggacgggggttacgtcctg
agtaacggacacaagcagctcatgtgtctggcccgctccatcctcagcaaggcccgcata
ctgctgctggacgaacccagcgccttcctcgaccccataacgttgcaggtcctgaggaag
accttgaaacagtcgttctccaactgtacagttatactgtcagaacacagagtggaacca
ctgctggagtgccagtccttcctgatgatcgagggcagttctatgaagaggtacgactcc
attcagaagctgttgaatgagaccagccacctgaagcaggccatgagtgctgctgagcgc
ctcaaactcttccccctgcaccgcctcaactccagcaagcgaccccctcaatcccagcag
cccaagatcaccgccctgcaggaggtggctgaggacgaggtccagaacacgcatctttaa
DBGET
integrated database retrieval system
